clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003A03 | Sequence | 603 | 003493 (5) | ref|XP_009609663.1| | 3e-37 | PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] | 765 | 013595 (3) | emb|CDP13507.1| | 1e-88 | unnamed protein product [Coffea canephora] |
JMFN004F15 | Sequence | 602 | 013595 (3) | emb|CDP13507.1| | 2e-77 | unnamed protein product [Coffea canephora] | |||||
JMFS039F04 | Sequence | 621 | 003493 (5) | ref|XP_009609663.1| | 4e-30 | PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] | |||||
JMFS100D10 | Sequence | 627 | 003493 (5) | ref|XP_009609663.1| | 5e-97 | PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] | |||||
JMFS166B07 | Sequence | 561 | 003493 (5) | ref|NP_001266205.1| | 5e-17 | RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gb|AFO53516.1| RNA-depende | |||||
JMSF048M05 | Sequence | 661 | 003493 (5) | ref|XP_009609663.1| | 2e-46 | PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis] | 722 | 013595 (3) | emb|CDP13507.1| | 3e-85 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003493============================================1133 ============================================Contig013595============================================ 765 99 ---------------------------------------------------->JMFF003A03 <---------------------------------------------------------------------------------------------------rJMFF003A03 125 --------------------------------------------------------->JMSF048M05 <----------------------------------------------------------------------------------------------rJMSF048M05 ----------------------------------------------------->JMFS039F04- ------------------------------------------------------>JMFS100D10- ------------------------------------------------->JMFS166B07- ------------------------------------------------------------------------------>JMFN004F15-