List of clones in pair P002307.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003A03Sequence603003493 (5)ref|XP_009609663.1|3e-37PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]765013595 (3)emb|CDP13507.1|1e-88unnamed protein product [Coffea canephora]
JMFN004F15Sequence602013595 (3)emb|CDP13507.1|2e-77unnamed protein product [Coffea canephora]
JMFS039F04Sequence621003493 (5)ref|XP_009609663.1|4e-30PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]
JMFS100D10Sequence627003493 (5)ref|XP_009609663.1|5e-97PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]
JMFS166B07Sequence561003493 (5)ref|NP_001266205.1|5e-17RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gb|AFO53516.1| RNA-depende
JMSF048M05Sequence661003493 (5)ref|XP_009609663.1|2e-46PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]722013595 (3)emb|CDP13507.1|3e-85unnamed protein product [Coffea canephora]

Contig 3493 BLAST Hits against nr-aa DB Show

Contig 13595 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003493============================================1133         ============================================Contig013595============================================ 765
  99          ---------------------------------------------------->JMFF003A03                                         <---------------------------------------------------------------------------------------------------rJMFF003A03  
 125          --------------------------------------------------------->JMSF048M05                                     <----------------------------------------------------------------------------------------------rJMSF048M05  
        ----------------------------------------------------->JMFS039F04-                                             
                                                  ------------------------------------------------------>JMFS100D10-  
     ------------------------------------------------->JMFS166B07-                                                    
                                                                                                                                  ------------------------------------------------------------------------------>JMFN004F15-