Clone JMFS100D10 [sequences]

contigF:003493 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009609663.1|12955e-973-62640-247+3259PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]
dbj|BAF96019.1|22931e-883-62640-247+31197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
gb|ADI52625.1|32932e-883-62640-247+31197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
ref|XP_009758053.1|42919e-883-62640-247+31197PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
gb|ACO72600.1|52911e-873-62640-247+31197RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
emb|CAR47810.1|62911e-873-62640-247+31197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
gb|AAU21242.1|72902e-873-62640-247+31197putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
gb|ACA13601.1|82902e-873-62640-247+31197RNA-dependent RNA polymerase [Nicotiana attenuata]
ref|XP_006346784.1|92801e-833-62640-247+31198PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum tuberosum] ref|XP_006346785.1| PREDICTED: RNA-depend
ref|XP_010319120.1|102732e-813-62640-247+31197PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum lycopersicum] ref|XP_010319121.1| PREDICTED: RNA-dependen
ref|NP_001266205.1|112732e-813-62640-247+31197RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicu
gb|KDP38635.1|122682e-793-62640-248+31198hypothetical protein JCGZ_03988 [Jatropha curcas]
ref|XP_011081567.1|132668e-793-61144-246+31205PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
ref|XP_010325614.1|142608e-773-62640-247+31200PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 6-like [Solanum lycopersicum]
gb|AHL27586.1|152584e-763-61139-241+31195RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
ref|XP_002515520.1|162565e-753-61140-243+31203RNA-dependent RNA polymerase, putative [Ricinus communis] gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus
ref|XP_007011871.1|172555e-753-62640-248+31197RNA-dependent RNA polymerase 6 [Theobroma cacao] gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
ref|XP_002324295.1|182542e-743-61140-243+31200SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus
ref|XP_006483358.1|192532e-743-62640-248+31025PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus sinensis]
ref|XP_006483356.1|202533e-743-62640-248+31197PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] ref|XP_006483357.1| PREDICTED: RNA-dependen
gb|ADG57590.1|212534e-743-62640-248+31196RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
gb|KDO61726.1|222527e-743-62640-248+31197hypothetical protein CISIN_1g041430mg [Citrus sinensis]
gb|KDP33599.1|232512e-733-61140-243+31199hypothetical protein JCGZ_07170 [Jatropha curcas]
gb|EPS62146.1|242498e-733-62634-241+31195hypothetical protein M569_12646, partial [Genlisea aurea]
ref|XP_011039698.1|252499e-733-61140-243+31195PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
gb|KJB55000.1|262482e-723-62640-248+31196hypothetical protein B456_009G057700 [Gossypium raimondii]
ref|XP_011026450.1|272482e-723-61140-243+31200PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
ref|XP_002308662.1|282475e-723-61140-243+31198SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus
ref|XP_007225440.1|292461e-713-61140-242+31196hypothetical protein PRUPE_ppa000422mg [Prunus persica] gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe
gb|EYU20269.1|302453e-713-62640-247+31196hypothetical protein MIMGU_mgv1a000386mg [Erythranthe guttata]
ref|XP_008394093.1|312445e-713-62640-248+31197PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica] ref|XP_008394094.1| PREDICTED: RNA-dependent RNA polymerase
ref|XP_008219491.1|322445e-713-61140-242+31196PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
gb|KHG28504.1|332432e-703-62640-251+31214RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
ref|XP_010531131.1|342402e-693-61145-246+31200PREDICTED: RNA-dependent RNA polymerase 6-like [Tarenaya hassleriana]
ref|XP_004160762.1|352403e-699-61141-242+31197PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
ref|XP_008445204.1|362396e-699-61141-242+31197PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo]
ref|NP_001267634.1|372387e-699-61141-242+31197RNA-dependent RNA polymerase 6-like [Cucumis sativus] gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] gb
ref|XP_002282647.1|382388e-699-61142-243+31197PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6
ref|XP_010531140.1|392382e-683-59353-248+31208PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Tarenaya hassleriana]
ref|XP_010531141.1|402372e-683-59340-235+31195PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Tarenaya hassleriana]
gb|AGU69384.1|442351e-673-62640-248+31201RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
ref|XP_009355733.1|452352e-673-62640-248+31197PREDICTED: RNA-dependent RNA polymerase 6 [Pyrus x bretschneideri] ref|XP_009355734.1| PREDICTED: RNA-dependent RNA poly
ref|XP_010503610.1|412347e-683-61140-241+3905PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Camelina sativa]
ref|XP_006404133.1|422348e-683-60856-256+3927hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] gb|ESQ45586.1| hypothetical protein EUTSA_v10010107mg [Eutr
dbj|BAJ34538.1|432341e-673-60840-240+3998unnamed protein product [Thellungiella halophila]
ref|XP_010503608.1|462343e-673-61140-241+31197PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Camelina sativa]
ref|XP_002877681.1|472343e-673-60840-240+31197RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabido
gb|KFK40016.1|482339e-673-60840-240+31198rna-dependent rna polymerase 6 [Arabis alpina]
ref|XP_006290518.1|492314e-663-61140-241+31197hypothetical protein CARUB_v10016597mg [Capsella rubella] gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsell
ref|XP_010515303.1|502314e-663-61140-241+31197PREDICTED: RNA-dependent RNA polymerase 6 [Camelina sativa]
ref|XP_003526410.1|512315e-663-61140-243+31204PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006581359.1| PREDICTED: RNA-dependent RN
ref|XP_003522618.1|522306e-663-61140-243+31204PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006578148.1| PREDICTED: RNA-dependent RN
gb|AES73660.2|532291e-659-62644-250+31203RNA-dependent RNA polymerase family protein [Medicago truncatula]
ref|XP_003603409.1|542291e-659-62629-235+31188Rna-dependent RNA polymerase [Medicago truncatula]
ref|XP_007137030.1|552292e-653-61140-243+31204hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phase
ref|XP_008778879.1|562283e-653-62644-251+31198PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Phoenix dactylifera]
gb|KHN07082.1|572284e-653-61140-243+31204RNA-dependent RNA polymerase 6 [Glycine soja]
ref|XP_010254390.1|582284e-653-62640-246+31193PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera] ref|XP_010254391.1| PREDICTED: RNA-dependent RNA polym
ref|XP_010921974.1|592278e-653-62644-251+31198PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis]
ref|XP_010048973.1|602279e-653-62640-248+31195PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81403.1| hypothetical protein EUGRSUZ_C02780 [
gb|AAF74208.1|AF268093_1612271e-643-60840-240+31196RNA-dependent RNA polymerase [Arabidopsis thaliana]
ref|NP_190519.1|622271e-643-60840-240+31196RNA-dependent RNA polymerase 6 [Arabidopsis thaliana] sp|Q9SG02.1|RDR6_ARATH RecName: Full=RNA-dependent RNA polymerase
ref|XP_004501325.1|632271e-649-62642-248+31201PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer arietinum] ref|XP_004501326.1| PREDICTED: RNA-dependen
ref|XP_004501324.1|642272e-649-62688-294+31247PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer arietinum]
ref|XP_010250107.1|652241e-633-62640-246+31200PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
gb|AHO49120.1|662234e-633-62640-248+31195RNA-dependent RNA polymerase 6 [Carica papaya]
ref|XP_009152135.1|672211e-623-59340-235+31198PREDICTED: RNA-dependent RNA polymerase 6 [Brassica rapa] ref|XP_009152142.1| PREDICTED: RNA-dependent RNA polymerase 6
gb|KDO48832.1|682165e-613-61138-240+31117hypothetical protein CISIN_1g048783mg, partial [Citrus sinensis]
ref|XP_009389500.1|692085e-583-62643-251+31199PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Musa acuminata subsp. malaccensis]
ref|XP_004291459.2|702055e-573-61143-246+31200PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_011459183.1|712055e-573-61140-243+31197PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca subsp. vesca]
ref|XP_010048974.1|722025e-563-62640-247+31196PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81405.1| hypothetical protein EUGRSUZ_C02782 [
ref|XP_010696115.1|732028e-563-59341-238+31208PREDICTED: RNA-dependent RNA polymerase 6 [Beta vulgaris subsp. vulgaris]
ref|XP_010101266.1|742021e-553-61140-239+31194RNA-dependent RNA polymerase 6 [Morus notabilis] gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
ref|XP_006842072.1|752012e-553-62643-249+31207hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] gb|ERN03747.1| hypothetical protein AMTR_s00078p0005504
emb|CDY30979.1|761904e-533-47940-197+3595BnaC04g24450D [Brassica napus]
ref|XP_006842073.1|771841e-493-62643-249+31207hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] gb|ERN03748.1| hypothetical protein AMTR_s00078p0005626
gb|KCW81402.1|781773e-473-58440-235+3967hypothetical protein EUGRSUZ_C02779 [Eucalyptus grandis]
ref|XP_010503609.1|791753e-46165-6113-149+31105PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Camelina sativa]
ref|XP_010232159.1|801664e-433-61150-256+31200PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
ref|XP_002457941.1|811621e-413-61149-250+31207hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] gb|EES03061.1| hypothetical protein SORBIDRAFT_03g022880 [So
ref|XP_003561343.1|821573e-403-61146-252+31208PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
tpg|DAA54873.1|831522e-383-61149-250+3937TPA: hypothetical protein ZEAMMB73_768916 [Zea mays]
sp|Q8LHH9.1|SHL2_ORYSJ841501e-373-61157-261+31218RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 [Oryza sativa Japonica Grou
ref|XP_004968861.1|851463e-363-61149-254+31211PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_002437386.1|881309e-313-62387-298+31239hypothetical protein SORBIDRAFT_10g025950 [Sorghum bicolor] gb|EER88753.1| hypothetical protein SORBIDRAFT_10g025950 [So
ref|XP_002437387.1|891272e-293-62393-315+31251hypothetical protein SORBIDRAFT_10g025970 [Sorghum bicolor] gb|EER88754.1| hypothetical protein SORBIDRAFT_10g025970 [So
emb|CDY55600.1|861257e-313-33534-145+3327BnaC01g42580D [Brassica napus]
emb|CDY68450.1|871258e-313-33540-151+3333BnaAnng27310D [Brassica napus]
ref|XP_008661039.1|901255e-293-62386-298+31238PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Zea mays]
gb|AFW87660.1|921257e-293-623749-961+31901hypothetical protein ZEAMMB73_096378 [Zea mays]
ref|XP_008659869.1|931257e-293-62386-299+31241PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Zea mays] gb|AFW87584.1| hypothetical protein ZEAMMB73_985632 [Ze
gb|AFW87586.1|911236e-293-623151-364+3577hypothetical protein ZEAMMB73_608283 [Zea mays]
ref|XP_002445216.1|941211e-273-61139-275+31220hypothetical protein SORBIDRAFT_07g006150 [Sorghum bicolor] gb|EES14711.1| hypothetical protein SORBIDRAFT_07g006150 [So
ref|XP_004974341.1|951204e-273-62638-286+31257PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_006645957.1|961152e-25252-61131-148+31105PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Oryza brachyantha]
ref|XP_004974340.1|971091e-233-62093-309+31432PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_008380344.1|981032e-233-53340-190+3205PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica]
gb|EEE54718.1|10097.82e-19261-611102-216+31571hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
ref|NP_001154496.1|9991.71e-193-32641-138+3143uncharacterized protein [Arabidopsis thaliana] gb|AAX55107.1| hypothetical protein At2g05370 [Arabidopsis thaliana] gb|A
gb|AAO11660.1|10190.93e-193-32641-138+3143hypothetical protein [Arabidopsis thaliana]
ref|NP_178605.1|10290.51e-183-31435-129+3211uncharacterized protein [Arabidopsis thaliana] gb|AAD32900.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05921.1|
ref|XP_004292989.2|10387.06e-16213-57836-161+31103PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp. vesca]
gb|ACI16098.1|10479.32e-13369-6111-80+31047RNA-directed RNA polymerase 6a [Hordeum vulgare]
gb|ABF82437.1|10563.52e-08111-62642-210+31152putative RNA-dependent RNA polymerase 6 [Physcomitrella patens] gb|ABF82438.1| putative RNA-dependent RNA polymerase 6 [
gb|EMS46141.1|10655.51e-05453-6111-51+31029putative RNA-dependent RNA polymerase SHL2 [Triticum urartu]
ref|XP_001785643.1|10753.54e-051049RNA-directed RNA polymerase [Physcomitrella patens] gb|EDQ49541.1| RNA-directed RNA polymerase, partial [Physcomitrella