name | 5'-sequence | 3'-sequence | length | description |
rank | score | Evalue | region1 | region2 | frame | rank | score | Evalue | region1 | region2 | frame |
ref|NP_001266205.1| | 1 | 89.7 | 5e-17 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicu
|
ref|XP_010319120.1| | 2 | 87.8 | 2e-16 | 385-558 | 1-56 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum lycopersicum] ref|XP_010319121.1| PREDICTED: RNA-dependen
|
gb|ACA13601.1| | 4 | 85.1 | 2e-15 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase [Nicotiana attenuata]
|
ref|XP_009758053.1| | 5 | 84.3 | 3e-15 | 385-558 | 1-56 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
|
ref|XP_009609663.1| | 3 | 84.0 | 3e-16 | 385-558 | 1-56 | +1 | | | | | | | 259 | PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]
|
emb|CAR47810.1| | 6 | 84.0 | 4e-15 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
|
ref|XP_010325614.1| | 7 | 84.0 | 4e-15 | 385-558 | 1-56 | +1 | | | | | | | 1200 | PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 6-like [Solanum lycopersicum]
|
gb|AAU21242.1| | 8 | 84.0 | 4e-15 | 385-558 | 1-56 | +1 | | | | | | | 1197 | putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
|
gb|ACO72600.1| | 9 | 83.6 | 5e-15 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
|
ref|XP_006346784.1| | 10 | 82.0 | 2e-14 | 385-558 | 1-56 | +1 | | | | | | | 1198 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum tuberosum] ref|XP_006346785.1| PREDICTED: RNA-depend
|
gb|EYU20269.1| | 11 | 81.6 | 2e-14 | 385-561 | 1-57 | +1 | | | | | | | 1196 | hypothetical protein MIMGU_mgv1a000386mg [Erythranthe guttata]
|
gb|ADI52625.1| | 12 | 81.6 | 2e-14 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
|
dbj|BAF96019.1| | 13 | 80.5 | 5e-14 | 385-558 | 1-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
|
gb|AHL27586.1| | 14 | 75.1 | 3e-12 | 409-561 | 6-56 | +1 | | | | | | | 1195 | RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
|
emb|CDY30979.1| | 15 | 73.6 | 7e-12 | 421-561 | 11-57 | +1 | | | | | | | 595 | BnaC04g24450D [Brassica napus]
|
ref|XP_011081567.1| | 16 | 72.8 | 2e-11 | 385-561 | 5-61 | +1 | | | | | | | 1205 | PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
|
gb|KDP38635.1| | 17 | 72.0 | 3e-11 | 385-561 | 1-57 | +1 | | | | | | | 1198 | hypothetical protein JCGZ_03988 [Jatropha curcas]
|
ref|XP_007011871.1| | 18 | 70.5 | 1e-10 | 385-561 | 1-57 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Theobroma cacao] gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
|
ref|XP_011026450.1| | 19 | 70.5 | 1e-10 | 421-561 | 11-57 | +1 | | | | | | | 1200 | PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
|
ref|XP_010254390.1| | 20 | 70.1 | 1e-10 | 385-561 | 1-57 | +1 | | | | | | | 1193 | PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera] ref|XP_010254391.1| PREDICTED: RNA-dependent RNA polym
|
ref|XP_010531131.1| | 21 | 69.7 | 2e-10 | 382-561 | 5-62 | +1 | | | | | | | 1200 | PREDICTED: RNA-dependent RNA polymerase 6-like [Tarenaya hassleriana]
|
ref|XP_006404133.1| | 22 | 69.3 | 2e-10 | 421-561 | 27-73 | +1 | | | | | | | 927 | hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] gb|ESQ45586.1| hypothetical protein EUTSA_v10010107mg [Eutr
|
dbj|BAJ34538.1| | 23 | 69.3 | 2e-10 | 421-561 | 11-57 | +1 | | | | | | | 998 | unnamed protein product [Thellungiella halophila]
|
gb|AAF74208.1|AF268093_1 | 24 | 69.3 | 2e-10 | 421-561 | 11-57 | +1 | | | | | | | 1196 | RNA-dependent RNA polymerase [Arabidopsis thaliana]
|
ref|NP_190519.1| | 25 | 69.3 | 3e-10 | 421-561 | 11-57 | +1 | | | | | | | 1196 | RNA-dependent RNA polymerase 6 [Arabidopsis thaliana] sp|Q9SG02.1|RDR6_ARATH RecName: Full=RNA-dependent RNA polymerase
|
ref|XP_002877681.1| | 26 | 68.9 | 3e-10 | 385-561 | 1-57 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabido
|
ref|XP_010531140.1| | 27 | 68.6 | 5e-10 | 382-561 | 13-70 | +1 | | | | | | | 1208 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Tarenaya hassleriana]
|
ref|XP_010531141.1| | 29 | 68.2 | 6e-10 | 385-561 | 1-57 | +1 | | | | | | | 1195 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Tarenaya hassleriana]
|
ref|XP_009152135.1| | 30 | 68.2 | 6e-10 | 421-561 | 11-57 | +1 | | | | | | | 1198 | PREDICTED: RNA-dependent RNA polymerase 6 [Brassica rapa] ref|XP_009152142.1| PREDICTED: RNA-dependent RNA polymerase 6
|
gb|KDP33599.1| | 32 | 67.8 | 8e-10 | 385-561 | 1-57 | +1 | | | | | | | 1199 | hypothetical protein JCGZ_07170 [Jatropha curcas]
|
gb|EPS62146.1| | 33 | 67.8 | 9e-10 | 403-561 | 1-51 | +1 | | | | | | | 1195 | hypothetical protein M569_12646, partial [Genlisea aurea]
|
ref|XP_006290518.1| | 34 | 67.4 | 1e-09 | 421-561 | 11-57 | +1 | | | | | | | 1197 | hypothetical protein CARUB_v10016597mg [Capsella rubella] gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsell
|
emb|CDY55600.1| | 28 | 67.0 | 5e-10 | 421-561 | 5-51 | +1 | | | | | | | 327 | BnaC01g42580D [Brassica napus]
|
ref|XP_010503610.1| | 35 | 67.0 | 1e-09 | 421-561 | 11-57 | +1 | | | | | | | 905 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Camelina sativa]
|
gb|KFK40016.1| | 36 | 67.0 | 1e-09 | 385-561 | 1-57 | +1 | | | | | | | 1198 | rna-dependent rna polymerase 6 [Arabis alpina]
|
ref|XP_010515303.1| | 37 | 67.0 | 1e-09 | 421-561 | 11-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Camelina sativa]
|
ref|XP_010503608.1| | 38 | 67.0 | 1e-09 | 421-561 | 11-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Camelina sativa]
|
emb|CDY68450.1| | 31 | 66.6 | 7e-10 | 421-561 | 11-57 | +1 | | | | | | | 333 | BnaAnng27310D [Brassica napus]
|
ref|XP_002515520.1| | 39 | 66.6 | 2e-09 | 421-561 | 11-57 | +1 | | | | | | | 1203 | RNA-dependent RNA polymerase, putative [Ricinus communis] gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus
|
ref|XP_002324295.1| | 40 | 64.7 | 8e-09 | 421-561 | 11-57 | +1 | | | | | | | 1200 | SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus
|
ref|XP_004968861.1| | 41 | 64.3 | 9e-09 | 418-561 | 19-66 | +1 | | | | | | | 1211 | PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
|
ref|XP_010250107.1| | 42 | 63.5 | 2e-08 | 418-561 | 10-57 | +1 | | | | | | | 1200 | PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
|
ref|XP_010048973.1| | 43 | 63.5 | 2e-08 | 421-561 | 11-57 | +1 | | | | | | | 1195 | PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81403.1| hypothetical protein EUGRSUZ_C02780 [
|
gb|ADG57590.1| | 44 | 63.5 | 2e-08 | 421-561 | 11-57 | +1 | | | | | | | 1196 | RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
|
gb|KHG28504.1| | 45 | 63.5 | 2e-08 | 421-561 | 11-57 | +1 | | | | | | | 1214 | RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
|
ref|XP_011039698.1| | 46 | 63.2 | 2e-08 | 421-561 | 11-57 | +1 | | | | | | | 1195 | PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
|
ref|XP_003522618.1| | 47 | 63.2 | 2e-08 | 394-558 | 2-56 | +1 | | | | | | | 1204 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006578148.1| PREDICTED: RNA-dependent RN
|
ref|XP_007137030.1| | 48 | 63.2 | 3e-08 | 421-561 | 11-57 | +1 | | | | | | | 1204 | hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phase
|
gb|KDO48832.1| | 49 | 62.8 | 3e-08 | 403-561 | 3-55 | +1 | | | | | | | 1117 | hypothetical protein CISIN_1g048783mg, partial [Citrus sinensis]
|
gb|KJB55000.1| | 50 | 62.8 | 3e-08 | 421-561 | 11-57 | +1 | | | | | | | 1196 | hypothetical protein B456_009G057700 [Gossypium raimondii]
|
ref|XP_003526410.1| | 51 | 62.4 | 4e-08 | 421-558 | 11-56 | +1 | | | | | | | 1204 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006581359.1| PREDICTED: RNA-dependent RN
|
gb|AHO49120.1| | 52 | 62.4 | 4e-08 | 421-561 | 11-57 | +1 | | | | | | | 1195 | RNA-dependent RNA polymerase 6 [Carica papaya]
|
ref|XP_002308662.1| | 54 | 62.4 | 4e-08 | 421-561 | 11-57 | +1 | | | | | | | 1198 | SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus
|
gb|KHN07082.1| | 56 | 62.0 | 6e-08 | 394-558 | 2-56 | +1 | | | | | | | 1204 | RNA-dependent RNA polymerase 6 [Glycine soja]
|
ref|XP_002282647.1| | 57 | 61.2 | 1e-07 | 385-561 | 1-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6
|
ref|XP_003561343.1| | 59 | 60.8 | 1e-07 | 418-561 | 16-63 | +1 | | | | | | | 1208 | PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
|
ref|XP_008778879.1| | 60 | 60.5 | 2e-07 | 385-561 | 1-61 | +1 | | | | | | | 1198 | PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Phoenix dactylifera]
|
ref|XP_010921974.1| | 61 | 60.5 | 2e-07 | 385-561 | 1-61 | +1 | | | | | | | 1198 | PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis]
|
sp|Q8LHH9.1|SHL2_ORYSJ | 62 | 60.5 | 2e-07 | 418-561 | 27-74 | +1 | | | | | | | 1218 | RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 [Oryza sativa Japonica Grou
|
gb|EEE54718.1| | 63 | 60.1 | 2e-07 | 418-561 | 27-74 | +1 | | | | | | | 1571 | hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
|
ref|XP_009389500.1| | 64 | 59.3 | 4e-07 | 406-558 | 9-59 | +1 | | | | | | | 1199 | PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Musa acuminata subsp. malaccensis]
|
gb|AAO11660.1| | 53 | 58.9 | 4e-08 | 415-561 | 9-58 | +1 | | | | | | | 143 | hypothetical protein [Arabidopsis thaliana]
|
ref|NP_001154496.1| | 55 | 58.9 | 4e-08 | 415-561 | 9-58 | +1 | | | | | | | 143 | uncharacterized protein [Arabidopsis thaliana] gb|AAX55107.1| hypothetical protein At2g05370 [Arabidopsis thaliana] gb|A
|
ref|NP_178605.1| | 58 | 58.9 | 1e-07 | 415-561 | 3-52 | +1 | | | | | | | 211 | uncharacterized protein [Arabidopsis thaliana] gb|AAD32900.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05921.1|
|
ref|XP_002457941.1| | 65 | 58.9 | 5e-07 | 418-561 | 19-66 | +1 | | | | | | | 1207 | hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] gb|EES03061.1| hypothetical protein SORBIDRAFT_03g022880 [So
|
ref|XP_009355733.1| | 66 | 58.9 | 6e-07 | 409-561 | 7-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Pyrus x bretschneideri] ref|XP_009355734.1| PREDICTED: RNA-dependent RNA poly
|
tpg|DAA54873.1| | 67 | 58.9 | 6e-07 | 418-561 | 19-66 | +1 | | | | | | | 937 | TPA: hypothetical protein ZEAMMB73_768916 [Zea mays]
|
gb|AES73660.2| | 68 | 58.9 | 6e-07 | 385-561 | 1-59 | +1 | | | | | | | 1203 | RNA-dependent RNA polymerase family protein [Medicago truncatula]
|
ref|XP_008394093.1| | 69 | 58.9 | 6e-07 | 409-561 | 7-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica] ref|XP_008394094.1| PREDICTED: RNA-dependent RNA polymerase
|
ref|XP_008445204.1| | 70 | 58.5 | 6e-07 | 400-561 | 3-56 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo]
|
ref|XP_011459183.1| | 71 | 58.5 | 6e-07 | 421-561 | 11-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca subsp. vesca]
|
ref|XP_004291459.2| | 72 | 58.5 | 6e-07 | 421-561 | 14-60 | +1 | | | | | | | 1200 | PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca subsp. vesca]
|
ref|XP_006842072.1| | 73 | 58.5 | 8e-07 | 403-561 | 8-60 | +1 | | | | | | | 1207 | hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] gb|ERN03747.1| hypothetical protein AMTR_s00078p0005504
|
ref|NP_001267634.1| | 74 | 58.2 | 9e-07 | 400-561 | 3-56 | +1 | | | | | | | 1197 | RNA-dependent RNA polymerase 6-like [Cucumis sativus] gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] gb
|
ref|XP_004160762.1| | 75 | 58.2 | 9e-07 | 400-561 | 3-56 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
|
ref|XP_010232159.1| | 76 | 57.8 | 1e-06 | 418-561 | 20-67 | +1 | | | | | | | 1200 | PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
|
ref|XP_010696115.1| | 77 | 57.8 | 1e-06 | 385-561 | 1-58 | +1 | | | | | | | 1208 | PREDICTED: RNA-dependent RNA polymerase 6 [Beta vulgaris subsp. vulgaris]
|
gb|AGU69384.1| | 78 | 57.4 | 1e-06 | 394-558 | 2-56 | +1 | | | | | | | 1201 | RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
|
ref|XP_006483358.1| | 79 | 57.0 | 2e-06 | 418-561 | 10-57 | +1 | | | | | | | 1025 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus sinensis]
|
gb|KDO61726.1| | 80 | 57.0 | 2e-06 | 418-561 | 10-57 | +1 | | | | | | | 1197 | hypothetical protein CISIN_1g041430mg [Citrus sinensis]
|
ref|XP_006483356.1| | 81 | 57.0 | 2e-06 | 418-561 | 10-57 | +1 | | | | | | | 1197 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] ref|XP_006483357.1| PREDICTED: RNA-dependen
|
ref|XP_004501325.1| | 82 | 57.0 | 2e-06 | 394-558 | 2-56 | +1 | | | | | | | 1201 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer arietinum] ref|XP_004501326.1| PREDICTED: RNA-dependen
|
ref|XP_008219491.1| | 83 | 57.0 | 2e-06 | 421-561 | 11-57 | +1 | | | | | | | 1196 | PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
|
ref|XP_004501324.1| | 84 | 57.0 | 2e-06 | 394-558 | 48-102 | +1 | | | | | | | 1247 | PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer arietinum]
|
ref|XP_010101266.1| | 85 | 56.6 | 3e-06 | 421-558 | 11-56 | +1 | | | | | | | 1194 | RNA-dependent RNA polymerase 6 [Morus notabilis] gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
|
ref|XP_010048974.1| | 86 | 55.8 | 5e-06 | 418-561 | 10-57 | +1 | | | | | | | 1196 | PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81405.1| hypothetical protein EUGRSUZ_C02782 [
|
ref|XP_007225440.1| | 87 | 55.8 | 6e-06 | 421-561 | 11-57 | +1 | | | | | | | 1196 | hypothetical protein PRUPE_ppa000422mg [Prunus persica] gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe
|
ref|XP_004974341.1| | 88 | 55.1 | 1e-05 | 430-561 | 12-55 | +1 | | | | | | | 1257 | PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
|
ref|XP_004974340.1| | 89 | 52.8 | 5e-05 | 415-561 | 62-110 | +1 | | | | | | | 1432 | PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
|
ref|XP_002445216.1| | 90 | 52.4 | 7e-05 | 421-561 | 9-56 | +1 | | | | | | | 1220 | hypothetical protein SORBIDRAFT_07g006150 [Sorghum bicolor] gb|EES14711.1| hypothetical protein SORBIDRAFT_07g006150 [So
|
ref|XP_006842073.1| | 91 | 52.4 | 8e-05 | 403-561 | 8-60 | +1 | | | | | | | 1207 | hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] gb|ERN03748.1| hypothetical protein AMTR_s00078p0005626
|
ref|XP_008380344.1| | 92 | 50.8 | 8e-05 | 409-561 | 7-57 | +1 | | | | | | | 205 | PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica]
|
gb|KCW81402.1| | 93 | 50.4 | 3e-04 | | | | | | | | | | 967 | hypothetical protein EUGRSUZ_C02779 [Eucalyptus grandis]
|