Clone JMFS166B07 [sequences]

contigF:003493 contigR:
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|NP_001266205.1|189.75e-17385-5581-56+11197RNA-dependent RNA polymerase 6 [Solanum lycopersicum] gb|AFO53516.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicu
ref|XP_010319120.1|287.82e-16385-5581-56+11197PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum lycopersicum] ref|XP_010319121.1| PREDICTED: RNA-dependen
gb|ACA13601.1|485.12e-15385-5581-56+11197RNA-dependent RNA polymerase [Nicotiana attenuata]
ref|XP_009758053.1|584.33e-15385-5581-56+11197PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
ref|XP_009609663.1|384.03e-16385-5581-56+1259PREDICTED: RNA-dependent RNA polymerase 6, partial [Nicotiana tomentosiformis]
emb|CAR47810.1|684.04e-15385-5581-56+11197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
ref|XP_010325614.1|784.04e-15385-5581-56+11200PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 6-like [Solanum lycopersicum]
gb|AAU21242.1|884.04e-15385-5581-56+11197putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
gb|ACO72600.1|983.65e-15385-5581-56+11197RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
ref|XP_006346784.1|1082.02e-14385-5581-56+11198PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum tuberosum] ref|XP_006346785.1| PREDICTED: RNA-depend
gb|EYU20269.1|1181.62e-14385-5611-57+11196hypothetical protein MIMGU_mgv1a000386mg [Erythranthe guttata]
gb|ADI52625.1|1281.62e-14385-5581-56+11197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
dbj|BAF96019.1|1380.55e-14385-5581-56+11197RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
gb|AHL27586.1|1475.13e-12409-5616-56+11195RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
emb|CDY30979.1|1573.67e-12421-56111-57+1595BnaC04g24450D [Brassica napus]
ref|XP_011081567.1|1672.82e-11385-5615-61+11205PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
gb|KDP38635.1|1772.03e-11385-5611-57+11198hypothetical protein JCGZ_03988 [Jatropha curcas]
ref|XP_007011871.1|1870.51e-10385-5611-57+11197RNA-dependent RNA polymerase 6 [Theobroma cacao] gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
ref|XP_011026450.1|1970.51e-10421-56111-57+11200PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
ref|XP_010254390.1|2070.11e-10385-5611-57+11193PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera] ref|XP_010254391.1| PREDICTED: RNA-dependent RNA polym
ref|XP_010531131.1|2169.72e-10382-5615-62+11200PREDICTED: RNA-dependent RNA polymerase 6-like [Tarenaya hassleriana]
ref|XP_006404133.1|2269.32e-10421-56127-73+1927hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum] gb|ESQ45586.1| hypothetical protein EUTSA_v10010107mg [Eutr
dbj|BAJ34538.1|2369.32e-10421-56111-57+1998unnamed protein product [Thellungiella halophila]
gb|AAF74208.1|AF268093_12469.32e-10421-56111-57+11196RNA-dependent RNA polymerase [Arabidopsis thaliana]
ref|NP_190519.1|2569.33e-10421-56111-57+11196RNA-dependent RNA polymerase 6 [Arabidopsis thaliana] sp|Q9SG02.1|RDR6_ARATH RecName: Full=RNA-dependent RNA polymerase
ref|XP_002877681.1|2668.93e-10385-5611-57+11197RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata] gb|EFH53940.1| RNA-dependent RNA polymerase 6 [Arabido
ref|XP_010531140.1|2768.65e-10382-56113-70+11208PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Tarenaya hassleriana]
ref|XP_010531141.1|2968.26e-10385-5611-57+11195PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Tarenaya hassleriana]
ref|XP_009152135.1|3068.26e-10421-56111-57+11198PREDICTED: RNA-dependent RNA polymerase 6 [Brassica rapa] ref|XP_009152142.1| PREDICTED: RNA-dependent RNA polymerase 6
gb|KDP33599.1|3267.88e-10385-5611-57+11199hypothetical protein JCGZ_07170 [Jatropha curcas]
gb|EPS62146.1|3367.89e-10403-5611-51+11195hypothetical protein M569_12646, partial [Genlisea aurea]
ref|XP_006290518.1|3467.41e-09421-56111-57+11197hypothetical protein CARUB_v10016597mg [Capsella rubella] gb|EOA23416.1| hypothetical protein CARUB_v10016597mg [Capsell
emb|CDY55600.1|2867.05e-10421-5615-51+1327BnaC01g42580D [Brassica napus]
ref|XP_010503610.1|3567.01e-09421-56111-57+1905PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Camelina sativa]
gb|KFK40016.1|3667.01e-09385-5611-57+11198rna-dependent rna polymerase 6 [Arabis alpina]
ref|XP_010515303.1|3767.01e-09421-56111-57+11197PREDICTED: RNA-dependent RNA polymerase 6 [Camelina sativa]
ref|XP_010503608.1|3867.01e-09421-56111-57+11197PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Camelina sativa]
emb|CDY68450.1|3166.67e-10421-56111-57+1333BnaAnng27310D [Brassica napus]
ref|XP_002515520.1|3966.62e-09421-56111-57+11203RNA-dependent RNA polymerase, putative [Ricinus communis] gb|EEF46969.1| RNA-dependent RNA polymerase, putative [Ricinus
ref|XP_002324295.1|4064.78e-09421-56111-57+11200SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEF02860.1| SILENCING DEFECTIVE 1 family protein [Populus
ref|XP_004968861.1|4164.39e-09418-56119-66+11211PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_010250107.1|4263.52e-08418-56110-57+11200PREDICTED: RNA-dependent RNA polymerase 6-like [Nelumbo nucifera]
ref|XP_010048973.1|4363.52e-08421-56111-57+11195PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81403.1| hypothetical protein EUGRSUZ_C02780 [
gb|ADG57590.1|4463.52e-08421-56111-57+11196RNA-dependent RNA polymerase 6 [Gossypium hirsutum] gb|ADG57592.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
gb|KHG28504.1|4563.52e-08421-56111-57+11214RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
ref|XP_011039698.1|4663.22e-08421-56111-57+11195PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
ref|XP_003522618.1|4763.22e-08394-5582-56+11204PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006578148.1| PREDICTED: RNA-dependent RN
ref|XP_007137030.1|4863.23e-08421-56111-57+11204hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris] gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phase
gb|KDO48832.1|4962.83e-08403-5613-55+11117hypothetical protein CISIN_1g048783mg, partial [Citrus sinensis]
gb|KJB55000.1|5062.83e-08421-56111-57+11196hypothetical protein B456_009G057700 [Gossypium raimondii]
ref|XP_003526410.1|5162.44e-08421-55811-56+11204PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine max] ref|XP_006581359.1| PREDICTED: RNA-dependent RN
gb|AHO49120.1|5262.44e-08421-56111-57+11195RNA-dependent RNA polymerase 6 [Carica papaya]
ref|XP_002308662.1|5462.44e-08421-56111-57+11198SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] gb|EEE92185.1| SILENCING DEFECTIVE 1 family protein [Populus
gb|KHN07082.1|5662.06e-08394-5582-56+11204RNA-dependent RNA polymerase 6 [Glycine soja]
ref|XP_002282647.1|5761.21e-07385-5611-57+11197PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera] ref|XP_010648660.1| PREDICTED: RNA-dependent RNA polymerase 6
ref|XP_003561343.1|5960.81e-07418-56116-63+11208PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
ref|XP_008778879.1|6060.52e-07385-5611-61+11198PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Phoenix dactylifera]
ref|XP_010921974.1|6160.52e-07385-5611-61+11198PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Elaeis guineensis]
sp|Q8LHH9.1|SHL2_ORYSJ6260.52e-07418-56127-74+11218RecName: Full=Probable RNA-dependent RNA polymerase SHL2; AltName: Full=Protein SHOOTLESS 2 [Oryza sativa Japonica Grou
gb|EEE54718.1|6360.12e-07418-56127-74+11571hypothetical protein OsJ_02054 [Oryza sativa Japonica Group]
ref|XP_009389500.1|6459.34e-07406-5589-59+11199PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase SHL2 [Musa acuminata subsp. malaccensis]
gb|AAO11660.1|5358.94e-08415-5619-58+1143hypothetical protein [Arabidopsis thaliana]
ref|NP_001154496.1|5558.94e-08415-5619-58+1143uncharacterized protein [Arabidopsis thaliana] gb|AAX55107.1| hypothetical protein At2g05370 [Arabidopsis thaliana] gb|A
ref|NP_178605.1|5858.91e-07415-5613-52+1211uncharacterized protein [Arabidopsis thaliana] gb|AAD32900.1| hypothetical protein [Arabidopsis thaliana] gb|AEC05921.1|
ref|XP_002457941.1|6558.95e-07418-56119-66+11207hypothetical protein SORBIDRAFT_03g022880 [Sorghum bicolor] gb|EES03061.1| hypothetical protein SORBIDRAFT_03g022880 [So
ref|XP_009355733.1|6658.96e-07409-5617-57+11197PREDICTED: RNA-dependent RNA polymerase 6 [Pyrus x bretschneideri] ref|XP_009355734.1| PREDICTED: RNA-dependent RNA poly
tpg|DAA54873.1|6758.96e-07418-56119-66+1937TPA: hypothetical protein ZEAMMB73_768916 [Zea mays]
gb|AES73660.2|6858.96e-07385-5611-59+11203RNA-dependent RNA polymerase family protein [Medicago truncatula]
ref|XP_008394093.1|6958.96e-07409-5617-57+11197PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica] ref|XP_008394094.1| PREDICTED: RNA-dependent RNA polymerase
ref|XP_008445204.1|7058.56e-07400-5613-56+11197PREDICTED: RNA-dependent RNA polymerase 6 [Cucumis melo]
ref|XP_011459183.1|7158.56e-07421-56111-57+11197PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca subsp. vesca]
ref|XP_004291459.2|7258.56e-07421-56114-60+11200PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_006842072.1|7358.58e-07403-5618-60+11207hypothetical protein AMTR_s00078p00055040 [Amborella trichopoda] gb|ERN03747.1| hypothetical protein AMTR_s00078p0005504
ref|NP_001267634.1|7458.29e-07400-5613-56+11197RNA-dependent RNA polymerase 6-like [Cucumis sativus] gb|ADU77019.1| RNA-dependent RNA polymerase 6 [Cucumis sativus] gb
ref|XP_004160762.1|7558.29e-07400-5613-56+11197PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
ref|XP_010232159.1|7657.81e-06418-56120-67+11200PREDICTED: probable RNA-dependent RNA polymerase SHL2 [Brachypodium distachyon]
ref|XP_010696115.1|7757.81e-06385-5611-58+11208PREDICTED: RNA-dependent RNA polymerase 6 [Beta vulgaris subsp. vulgaris]
gb|AGU69384.1|7857.41e-06394-5582-56+11201RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
ref|XP_006483358.1|7957.02e-06418-56110-57+11025PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus sinensis]
gb|KDO61726.1|8057.02e-06418-56110-57+11197hypothetical protein CISIN_1g041430mg [Citrus sinensis]
ref|XP_006483356.1|8157.02e-06418-56110-57+11197PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus sinensis] ref|XP_006483357.1| PREDICTED: RNA-dependen
ref|XP_004501325.1|8257.02e-06394-5582-56+11201PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer arietinum] ref|XP_004501326.1| PREDICTED: RNA-dependen
ref|XP_008219491.1|8357.02e-06421-56111-57+11196PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
ref|XP_004501324.1|8457.02e-06394-55848-102+11247PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer arietinum]
ref|XP_010101266.1|8556.63e-06421-55811-56+11194RNA-dependent RNA polymerase 6 [Morus notabilis] gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
ref|XP_010048974.1|8655.85e-06418-56110-57+11196PREDICTED: RNA-dependent RNA polymerase 6-like [Eucalyptus grandis] gb|KCW81405.1| hypothetical protein EUGRSUZ_C02782 [
ref|XP_007225440.1|8755.86e-06421-56111-57+11196hypothetical protein PRUPE_ppa000422mg [Prunus persica] gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe
ref|XP_004974341.1|8855.11e-05430-56112-55+11257PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_004974340.1|8952.85e-05415-56162-110+11432PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria italica]
ref|XP_002445216.1|9052.47e-05421-5619-56+11220hypothetical protein SORBIDRAFT_07g006150 [Sorghum bicolor] gb|EES14711.1| hypothetical protein SORBIDRAFT_07g006150 [So
ref|XP_006842073.1|9152.48e-05403-5618-60+11207hypothetical protein AMTR_s00078p00056260 [Amborella trichopoda] gb|ERN03748.1| hypothetical protein AMTR_s00078p0005626
ref|XP_008380344.1|9250.88e-05409-5617-57+1205PREDICTED: RNA-dependent RNA polymerase 6 [Malus domestica]
gb|KCW81402.1|9350.43e-04967hypothetical protein EUGRSUZ_C02779 [Eucalyptus grandis]