List of clones in pair P001360.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028B20Sequence516005217 (5)emb|CDP17754.1|5e-28unnamed protein product [Coffea canephora]695004866 (6)gb|EYU35387.1|3e-04hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
JMFF041O07Sequence651005217 (5)ref|XP_011087584.1|4e-127PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Sesamum indicu414004866 (6)gb|EYU35387.1|2e-06hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
JMFS043H07Sequence416004866 (6)gb|EYU35387.1|5e-05hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
JMFS057A02Sequence614005217 (5)emb|CDP17754.1|3e-55unnamed protein product [Coffea canephora]
JMFS095C10Sequence607005217 (5)emb|CDP17754.1|3e-55unnamed protein product [Coffea canephora]
JMFS132B07Sequence623004866 (6)gb|EYU35387.1|1e-04hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
JMFS165A10Sequence602004866 (6)gb|EYU35387.1|1e-04hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
JMSF037L06Sequence655005217 (5)emb|CDP17754.1|2e-43unnamed protein product [Coffea canephora]711004866 (6)ref|XP_010546798.1|2e-11PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Tarenaya hassl

Contig 5217 BLAST Hits against nr-aa DB Show

Contig 4866 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005217============================================1184         ============================================Contig004866============================================ 816
  86  ------------------------------------------->JMFF028B20                                                               <------------------------------------------------------------------------------------rJMFF028B20  
 107 ------------------------------------------------------>JMSF037L06                                                <--------------------------------------------------------------------------------------rJMSF037L06  
 570                                              ------------------------------------------------------>JMFF041O07                                                <--------------------------------------------------rJMFF041O07  
        -------------------------------------------------->JMFS095C10-                                                
        -------------------------------------------------->JMFS057A02-                                                
                                                                                                                                        ------------------------------------------------------------------------->JMFS165A10-  
                                                                                                                                                            -------------------------------------------------->JMFS043H07-  
                                                                                                                                              <---------------------------------------------------------------------------JMFS132B07-