Clone JMFF028B20 [sequences]

contigF:005217 contigR:004866

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
emb\|CDP17754.1\|	1	120	5e-28	75-515	1-154	+3							779	unnamed protein product [Coffea canephora]
ref\|XP_004302309.1\|	36	61.2	7e-08	87-515	2-142	+3	2	50.8	4e-04				772	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Fragaria vesca subsp. vesca]
ref\|XP_009789500.1\|	2	108	9e-24	75-515	1-129	+3							741	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Nicotiana sylvestris]
ref\|XP_009604646.1\|	3	107	2e-23	75-515	1-125	+3							737	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2 [Nicotiana tomentosiformis]
ref\|XP_009604645.1\|	4	107	2e-23	75-515	1-125	+3							738	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1 [Nicotiana tomentosiformis]
ref\|XP_006355275.1\|	5	106	3e-23	114-515	14-130	+3							744	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Solanum tuberosum]
gb\|EYU33253.1\|	6	104	2e-22	87-515	3-142	+3							806	hypothetical protein MIMGU_mgv1a001505mg [Erythranthe guttata]
ref\|XP_004244948.1\|	7	102	9e-22	114-515	14-130	+3							746	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Solanum lycopersicum]
ref\|XP_011087584.1\|	8	101	3e-21	114-515	14-141	+3							770	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Sesamum indicum]
ref\|XP_010094933.1\|	9	83.2	4e-15	87-515	2-135	+3							810	DEAD-box ATP-dependent RNA helicase 3 [Morus notabilis] gb\|EXB57576.1\| DEAD-box ATP-dependent RNA helicase 3 [Morus nota
ref\|XP_002512602.1\|	10	80.9	3e-14	84-515	3-145	+3							772	dead box ATP-dependent RNA helicase, putative [Ricinus communis] gb\|EEF50054.1\| dead box ATP-dependent RNA helicase, put
ref\|XP_007208352.1\|	11	80.1	4e-14	87-515	2-140	+3							766	hypothetical protein PRUPE_ppa001778mg [Prunus persica] gb\|EMJ09551.1\| hypothetical protein PRUPE_ppa001778mg [Prunus pe
ref\|XP_008246347.1\|	12	79.0	1e-13	87-515	2-140	+3							768	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Prunus mume]
gb\|EPS66084.1\|	13	77.0	4e-13	75-515	1-130	+3							775	hypothetical protein M569_08688 [Genlisea aurea]
ref\|XP_009337853.1\|	14	75.9	1e-12	87-515	2-138	+3							765	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Pyrus x bretschneideri]
ref\|XP_002278318.1\|	15	74.7	2e-12	87-515	3-141	+3							764	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Vitis vinifera] emb\|CBI39694.3\| unnamed protein produc
emb\|CAN77581.1\|	16	74.7	3e-12	87-515	3-141	+3							786	hypothetical protein VITISV_015347 [Vitis vinifera]
ref\|XP_008370322.1\|	17	72.8	1e-11	87-515	2-137	+3							764	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Malus domestica]
ref\|XP_009365993.1\|	18	72.4	2e-11	87-515	2-137	+3							764	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Pyrus x bretschneideri]
ref\|XP_006382239.1\|	19	68.2	4e-10	75-515	1-158	+3							775	hypothetical protein POPTR_0005s00240g [Populus trichocarpa] gb\|ERP60036.1\| hypothetical protein POPTR_0005s00240g [Popu
ref\|XP_006382238.1\|	20	68.2	5e-10	75-515	1-158	+3							731	hypothetical protein POPTR_0005s00240g [Populus trichocarpa] gb\|ERP60035.1\| hypothetical protein POPTR_0005s00240g [Popu
gb\|KDP23314.1\|	21	66.6	1e-09	126-515	16-143	+3							758	hypothetical protein JCGZ_23147 [Jatropha curcas]
ref\|XP_011039072.1\|	22	66.2	2e-09	75-515	1-158	+3							776	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Populus euphratica]
ref\|XP_011039071.1\|	23	65.5	3e-09	75-515	1-158	+3							627	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X3 [Populus euphratica]
ref\|XP_011039068.1\|	24	65.5	3e-09	75-515	1-158	+3							776	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X1 [Populus euphratica]
ref\|XP_011039069.1\|	25	65.5	4e-09	75-515	1-158	+3							775	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X2 [Populus euphratica]
ref\|XP_003521635.1\|	26	63.9	9e-09	87-515	2-136	+3							771	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max]
ref\|XP_010932029.1\|	28	62.8	2e-08	87-515	2-148	+3							761	PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Elaeis guineensis]
ref\|XP_008798630.1\|	29	62.4	3e-08	87-515	2-142	+3							762	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Phoenix dactylifera]
gb\|KCW58706.1\|	30	62.0	4e-08	111-515	11-169	+3							669	hypothetical protein EUGRSUZ_H01352 [Eucalyptus grandis]
ref\|XP_010070121.1\|	31	62.0	4e-08	111-515	11-169	+3							784	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Eucalyptus grandis] gb\|KCW58705.1\| hypothetical protei
ref\|XP_003554590.1\|	32	62.0	5e-08	87-515	3-135	+3							771	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Glycine max]
ref\|XP_004165586.1\|	33	61.6	6e-08	87-515	2-137	+3							726	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like, partial [Cucumis sativus]
ref\|XP_004135577.1\|	34	61.2	7e-08	87-515	2-137	+3							748	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Cucumis sativus] gb\|KGN66001.1\| hypothetical prot
ref\|XP_008450498.1\|	35	61.2	7e-08	87-515	2-137	+3							748	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo]
ref\|XP_010680184.1\|	38	60.8	1e-07	84-515	3-132	+3							778	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Beta vulgaris subsp. vulgaris]
gb\|AAC13590.1\|	37	60.5	9e-08	87-515	2-127	+3							477	contains similarity to the conserved C-terminal domain of helicases (Pfam: helicase_C.hmm, score: 90.11), similar to DE
emb\|CAA09196.1\|	39	60.5	1e-07	87-515	2-127	+3							748	RNA helicase [Arabidopsis thaliana]
ref\|XP_007163272.1\|	40	60.5	1e-07	87-515	2-140	+3							776	hypothetical protein PHAVU_001G220500g [Phaseolus vulgaris] gb\|ESW35266.1\| hypothetical protein PHAVU_001G220500g [Phase
gb\|AAM91087.1\|	41	60.5	1e-07	87-515	2-127	+3							748	At5g26740 [Arabidopsis thaliana]
ref\|NP_680225.2\|	42	60.5	1e-07	87-515	2-127	+3							747	DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] gb\|AAM26693.1\| At5g26743 [Arabidopsis thaliana] gb\|AAO42779
ref\|NP_001031943.1\|	43	60.5	1e-07	87-515	2-127	+3							748	DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis thaliana] sp\|Q8L7S8.2\|RH3_ARATH RecName: Full=DEAD-box ATP-dependent
ref\|XP_006290010.1\|	44	59.3	3e-07	87-515	2-126	+3							746	hypothetical protein CARUB_v10003641mg [Capsella rubella] gb\|EOA22908.1\| hypothetical protein CARUB_v10003641mg [Capsell
ref\|XP_006394884.1\|	45	59.3	3e-07	87-515	2-129	+3							751	hypothetical protein EUTSA_v10003698mg [Eutrema salsugineum] ref\|XP_006394885.1\| hypothetical protein EUTSA_v10003698mg
ref\|XP_010245402.1\|	46	59.3	3e-07	87-515	2-142	+3							761	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Nelumbo nucifera]
ref\|XP_006480317.1\|	47	58.5	5e-07	84-515	3-149	+3							766	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X3 [Citrus sinensis]
ref\|XP_006480316.1\|	48	58.5	5e-07	84-515	3-149	+3							767	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X2 [Citrus sinensis]
ref\|XP_006480315.1\|	49	58.5	5e-07	84-515	3-149	+3							768	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X1 [Citrus sinensis]
ref\|XP_006423935.1\|	50	58.5	5e-07	84-515	3-149	+3							779	hypothetical protein CICLE_v10027858mg [Citrus clementina] ref\|XP_006423937.1\| hypothetical protein CICLE_v10027858mg [C
ref\|XP_006423936.1\|	51	58.5	5e-07	84-515	3-149	+3							780	hypothetical protein CICLE_v10027858mg [Citrus clementina] gb\|ESR37176.1\| hypothetical protein CICLE_v10027858mg [Citrus
ref\|XP_002874312.1\|	52	58.2	7e-07	87-515	2-127	+3							748	RNA helicase [Arabidopsis lyrata subsp. lyrata] gb\|EFH50571.1\| RNA helicase [Arabidopsis lyrata subsp. lyrata]
ref\|XP_008777792.1\|	53	57.4	1e-06	87-515	2-147	+3							759	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Phoenix dactylifera]
ref\|XP_010421509.1\|	54	57.4	1e-06	87-515	2-127	+3							747	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Camelina sativa]
emb\|CDX87045.1\|	55	57.0	2e-06	87-515	2-122	+3							746	BnaC09g03600D [Brassica napus]
ref\|XP_010455001.1\|	56	57.0	2e-06	87-515	2-127	+3							747	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Camelina sativa]
ref\|XP_010493908.1\|	57	56.6	2e-06	87-515	2-127	+3							748	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X1 [Camelina sativa]
emb\|CDY05524.1\|	58	56.6	2e-06	87-515	2-112	+3							738	BnaA02g31670D [Brassica napus]
ref\|XP_009129927.1\|	59	56.6	2e-06	87-515	2-112	+3							739	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Brassica rapa]
gb\|KFK26417.1\|	60	56.2	3e-06	87-515	2-119	+3							746	hypothetical protein AALP_AA8G245800 [Arabis alpina]
ref\|XP_009151140.1\|	61	55.5	5e-06	87-515	2-123	+3							748	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Brassica rapa]
emb\|CDY61108.1\|	62	55.5	5e-06	87-515	2-123	+3							750	BnaA06g39420D [Brassica napus]
ref\|XP_006841548.1\|	63	55.1	7e-06	87-515	2-152	+3							768	hypothetical protein AMTR_s00003p00168720 [Amborella trichopoda] gb\|ERN03223.1\| hypothetical protein AMTR_s00003p0016872
ref\|XP_010546798.1\|	64	55.1	8e-06	87-515	2-123	+3							739	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Tarenaya hassleriana]
emb\|CDY66725.1\|	65	54.7	1e-05	87-515	2-118	+3							743	BnaC02g48430D [Brassica napus]
gb\|AHW45791.1\|	67	54.3	1e-05	87-515	2-124	+3							751	DEAD-box ATP-dependent RNA helicase 3 [Brassica rapa subsp. chinensis]
ref\|XP_009111705.1\|	69	54.3	1e-05	87-515	2-122	+3							743	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Brassica rapa]
emb\|CDY19766.1\|	70	53.9	2e-05	87-515	2-120	+3							761	BnaA09g04190D [Brassica napus]
ref\|XP_006382233.1\|	71	52.8	4e-05	75-515	1-160	+3							773	hypothetical protein POPTR_0005s00200g [Populus trichocarpa] gb\|ERP60030.1\| hypothetical protein POPTR_0005s00200g [Popu
ref\|XP_006382234.1\|	72	52.8	4e-05	75-515	1-160	+3							774	hypothetical protein POPTR_0005s00200g [Populus trichocarpa] gb\|ERP60031.1\| hypothetical protein POPTR_0005s00200g [Popu
ref\|XP_010551750.1\|	73	52.4	6e-05	291-515	68-133	+3							756	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Tarenaya hassleriana]
gb\|EYU35387.1\|							1	51.2	3e-04	290-364	753-777	-2	777	hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
gb\|AIG56841.1\|	74	51.2	1e-04	291-515	49-121	+3							550	DEAD-box RNA helicase [Triticum aestivum]
emb\|CDX80564.1\|	75	50.4	2e-04	87-515	2-104	+3							728	BnaC07g28800D [Brassica napus]
ref\|XP_009381386.1\|	76	50.4	2e-04	78-515	3-139	+3							769	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X1 [Musa acuminata subsp. malaccensis]
ref\|XP_009381394.1\|	77	50.4	2e-04	78-515	3-139	+3							754	PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like isoform X2 [Musa acuminata subsp. malaccensis]
dbj\|BAD21122.1\|	79	50.1	3e-04	291-515	47-116	+3							764	ATP-dependent RNA helicase [Hordeum vulgare subsp. vulgare] dbj\|BAK05234.1\| predicted protein [Hordeum vulgare subsp. vu
sp\|P85199.1\|RH3_HELAN	78	49.7	2e-04	84-515	13-145	+3							234	RecName: Full=DEAD-box ATP-dependent RNA helicase 3, partial [Helianthus annuus]
ref\|XP_007031309.1\|	80	48.9	7e-04	87-515	2-133	+3							622	DEAD box RNA helicase (RH3) isoform 4 [Theobroma cacao] gb\|EOY11811.1\| DEAD box RNA helicase (RH3) isoform 4 [Theobroma
ref\|XP_007031308.1\|	81	48.5	0.001	87-515	2-133	+3							689	DEAD box RNA helicase (RH3) isoform 3, partial [Theobroma cacao] gb\|EOY11810.1\| DEAD box RNA helicase (RH3) isoform 3, p
ref\|XP_007031306.1\|	82	48.5	0.001	87-515	2-133	+3							742	DEAD box RNA helicase isoform 1 [Theobroma cacao] gb\|EOY11808.1\| DEAD box RNA helicase isoform 1 [Theobroma cacao]
ref\|XP_007031307.1\|	83	48.5	0.001										732	DEAD box RNA helicase isoform 2 [Theobroma cacao] gb\|EOY11809.1\| DEAD box RNA helicase isoform 2 [Theobroma cacao]
ref\|XP_010045735.1\|	66	6	53.5										268	PREDICTED: uncharacterized protein LOC104434526 [Eucalyptus grandis]
ref\|XP_010063916.1\|	68	1	53.9										402	PREDICTED: uncharacterized protein LOC104450901 [Eucalyptus grandis]
gb\|KHN43389.1\|	27	c	63.9										817	DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Glycine soja]