List of clones in pair P000941.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012A20Sequence471003777 (4)ref|XP_009795542.1|2e-56PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth776008180 (6)gb|KDP29954.1|7e-106hypothetical protein JCGZ_18523 [Jatropha curcas]
JMFF039A14Sequence572003777 (4)ref|XP_009795542.1|2e-77PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth706008180 (6)gb|KDP29954.1|1e-118hypothetical protein JCGZ_18523 [Jatropha curcas]
JMFF050I01Sequence627003777 (4)ref|XP_009795542.1|3e-91PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth637008180 (6)ref|XP_011008074.1|1e-89PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth
JMSF029C13Sequence538008180 (6)ref|XP_011008074.1|2e-76PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth494008180 (6)ref|XP_011008074.1|1e-76PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth
JMSF035M21Sequence657003777 (4)ref|XP_009795542.1|4e-90PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-meth669008180 (6)ref|XP_002320530.2|4e-113hypothetical protein POPTR_0014s16720g [Populus trichocarpa] gb|EEE98845.2| hypo

Contig 3777 BLAST Hits against nr-aa DB Show

Contig 8180 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003777============================================ 661         ============================================Contig008180============================================ 794
  42       ---------------------------------------------------------------------->JMFF012A20                            <-------------------------------------------------------------------------------------------------rJMFF012A20  
  67       --------------------------------------------------------------------------------------------->JMFF050I01                    <-------------------------------------------------------------------------------rJMFF050I01  
 135 -------------------------------------------------------------------------------------------------->JMSF035M21      <--------------------------------------------------------------------------------rJMSF035M21  
 141       ------------------------------------------------------------------------------------->JMFF039A14           <---------------------------------------------------------------------------------------rJMFF039A14  


                                                                                                                                               ------------------------------------------------------------------>JMSF029C13**
                                                                                                                                              <-------------------------------------------------------------rJMSF029C13**