List of clones in pair P000394.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C04Sequence541001609 (7)607000419 (8)ref|XP_009104154.1|8e-19PREDICTED: serine/threonine-protein kinase SRK2A [Brassica rapa] emb|CDY46190.1|
JMFF012I21Sequence551001609 (7)ref|XP_009348751.1|8e-100PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]682000419 (8)gb|KDO50087.1|7e-41hypothetical protein CISIN_1g0187341mg, partial [Citrus sinensis] gb|KDO50088.1|
JMFF028B09Sequence551001609 (7)ref|XP_009348751.1|7e-105PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]765000419 (8)ref|XP_003540159.1|6e-50PREDICTED: serine/threonine-protein kinase SRK2A-like [Glycine max]
JMFF039L08Sequence540001609 (7)679000419 (8)ref|XP_006384980.1|1e-39hypothetical protein POPTR_0004s22770g [Populus trichocarpa] gb|ERP62777.1| hypo
JMFF040J15Sequence681000419 (8)ref|XP_003540159.1|7e-68PREDICTED: serine/threonine-protein kinase SRK2A-like [Glycine max]
JMFF050E24Sequence631001609 (7)emb|CAE54076.1|3e-22serine/threonine-protein kinase [Fagus sylvatica]645000419 (8)emb|CBI29763.3|2e-18unnamed protein product [Vitis vinifera]
JMFS047D07Sequence549000419 (8)
JMFS119C06Sequence621001609 (7)ref|XP_009348751.1|3e-112PREDICTED: serine/threonine-protein kinase SRK2A [Pyrus x bretschneideri]
JMSF010A14Sequence228001609 (7)720000419 (8)ref|XP_009776074.1|5e-58PREDICTED: serine/threonine-protein kinase SRK2A [Nicotiana sylvestris] gb|AAL89

Contig 1609 BLAST Hits against nr-aa DB Show

Contig 419 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001609============================================1079         ============================================Contig000419============================================ 925
 121 --------------------------------------------------------->JMFF050E24                                                                  <-----------------------------------------------------------------rJMFF050E24  
 139 ------------------------------------------------->JMFF039L08                                                                 <------------------------------------------------------------------------rJMFF039L08  
 157 ------------------------------------------------->JMFF012C04                                                                        <---------------------------------------------------------------rJMFF012C04  
 371                   -------------------->JMSF010A14                                                                    <----------------------------------------------------------------------------rJMSF010A14  
 669                                                  ------------------------------------------------>JMFF012I21                <-------------------------------------------------------------------------rJMFF012I21  
 679                                                  -------------------------------------------------->JMFF028B09     <---------------------------------------------------------------------------------rJMFF028B09  
                                                 ---------------------------------------->JMFS119C06-                 
                                                                                                                      <-------------------------------------------------------------------------rJMFF040J15- 
                                                                                                                                                               ---------------------------------------------------------->JMFS047D07-