Alignment Contig 419

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFS047D07- ACTATAACTTTTGACCGTGGTAAGCATTTCATCCTACACAATGTTTGATATGGTTTTGGT
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consensus ACTATAACTTTTGACCGTGGTAAGCATTTCATCCTACACAATGTTTGATATGGTTTTGGT

. : . : . : . : . : . :
JMFS047D07- TTTACTAACTTGGGTACACTAATTCCTACAAATATTTAGTACATGGGAAGACATTTTAGT
rJMFF050E24+ T
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consensus TTTACTAACTTGGGTACACTAATTCCTACAAATATTTAGTACATGGGAAGACATTTTAGT

. : . : . : . : . : . :
JMFS047D07- TTCCACACAATCATTCAATTTTCTTCTATTTTCTAGCAAATGGAAACACCAAACACAGGT
rJMFF050E24+ TTCCACACAATCATTCAATTTTCTTCTATTTTCTAGCAAATGGAAACACCAAACACAGGT
rJMFF039L08+ ATTTTCTTCTATTTTCTAGCAAATGGAAACACCAAACACAGGT
rJMFF012C04+ GCAAATGGAAACACCAGACACAGGT
rJMFF012I21+ ATTTTCTTCTATTTTCTAGCAAATGGAAACACCAAACACAGGT
rJMFF028B09+ ATTTTCTAGCAAATGGAAACACCAAACACAGGT
rJMSF010A14+ GGT
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consensus TTCCACACAATCATTCAATTTTCTTCTATTTTCTAGCAAATGGAAACACCAAACACAGGT

. : . : . : . : . : . :
JMFS047D07- CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
rJMFF050E24+ CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
rJMFF039L08+ CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
rJMFF012C04+ CTTANAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCNAATATTGCA
rJMFF012I21+ CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
rJMFF028B09+ CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
rJMSF010A14+ CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA
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consensus CTTAGAGTTCTTGCTTCTTAAAGCTGCACTTCCAATCCTAGATACAACTCCAATATTGCA

. : . : . : . : . : . :
JMFS047D07- TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMFF050E24+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMFF039L08+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMFF012C04+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCANAAAGGNACAAACCTTA
rJMFF012I21+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMFF028B09+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMSF010A14+ TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
rJMFF040J15+ CATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA
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consensus TTCCATTTCCTATGGAAATAATATTCACACTCTCAAGACTCCAGAAAGGTACAAACCTTA

. : . : . : . : . : . :
JMFS047D07- TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF050E24+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF039L08+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF012C04+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF012I21+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF028B09+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMSF010A14+ TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT
rJMFF040J15+ TTTAATTCCATACCTGAAAGTTCAAACCAATTCTACACAAACCATTCCGATATCAAAACT
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consensus TTTAATTCCATACCTGAAAGTTCAAACCAATTTTACACAAACCATTCCGATATCAAAACT

. : . : . : . : . : . :
JMFS047D07- TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMFF050E24+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMFF039L08+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMFF012C04+ TCACTACGAGCANCAAATGCNAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGNCACGCG
rJMFF012I21+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMFF028B09+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMSF010A14+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
rJMFF040J15+ TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG
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consensus TCACTACGAGCAGCAAATGCGAATGGGTGGGTGGGTGGGTGGGCGGGCTCAAGTCACGCG

. : . : . : . : . : . :
JMFS047D07- AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMFF050E24+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMFF039L08+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMFF012C04+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGCATTCATCTTCTCCGTCTTC
rJMFF012I21+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMFF028B09+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMSF010A14+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
rJMFF040J15+ AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC
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consensus AACTTCTCCACTCTCGTGTGCTCGCTTCAGTTGCTTTTCGTATTCATCTTCTCCGTCTTC

. : . : . : . : . : . :
JMFS047D07- TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF050E24+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF039L08+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF012C04+ TTCGNCCTCCTCTTCATCTTCGGCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF012I21+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF028B09+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMSF010A14+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
rJMFF040J15+ TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC
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consensus TTCGTCCTCCTCTTCATCTTCGTCTTCTTGTTCTTGTTCTTCCTCTTCCTCTTCTTCTTC

. : . : . : . : . : . :
JMFS047D07- TTCTTCTAC
rJMFF050E24+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGNCTTCCCAGCCAAAACCTCCCAT
rJMFF039L08+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT
rJMFF012C04+ TTCTTCTACGNCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAANCTCCCAT
rJMFF012I21+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT
rJMFF028B09+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT
rJMSF010A14+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT
rJMFF040J15+ TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT
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consensus TTCTTCTACGTCACCTTCTTTCTTCTCTTCCTCTCCGTCTTCCCAGCCAAAACCTCCCAT

. : . : . : . : . : . :
rJMFF050E24+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMFF039L08+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMFF012C04+ GGAACNAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMFF012I21+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMFF028B09+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMSF010A14+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
rJMFF040J15+ GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC
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consensus GGAACGAGAAGCTGGAGGGGGAGCCTTGGCTTCGTCCACAATTTTCATGATCTCCTCCGC

. : . : . : . : . : . :
rJMFF050E24+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
rJMFF039L08+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
rJMFF012C04+ GCTTTGAAGGGAAAAGGTCNGGTTTTCTCTTCTGNAATAGGCTGCTTGTGCCACTTCCGT
rJMFF012I21+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
rJMFF028B09+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
rJMSF010A14+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
rJMFF040J15+ GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT
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consensus GCTTTGAAGGGAAAAGGTCGGGTTTTCTCTTCTGTAATAGGCTGCTTGTGCCACTTCCGT

. : . : . : . : . : . :
rJMFF050E24+ TAATTC
rJMFF039L08+ TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTNAT
rJMFF012C04+ TAATTCTCATGGCAGATTCTTCAAAAAC
rJMFF012I21+ TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTTAT
rJMFF028B09+ TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTTAT
rJMSF010A14+ TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTTAT
rJMFF040J15+ TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTTAT
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consensus TAATTCTCTTGGCAGATTCTTCAAAAACCACGGGTGGGACTTGATCTCTTTAATGGTTAT

. : . : . : . : . : . :
rJMFF039L08+ CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAG
rJMFF012I21+ CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAGAAG
rJMFF028B09+ CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAGAAGGTGCCTACNATCCTGTGAAAT
rJMSF010A14+ CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAGAAGGTGCCTACAATCCTGTGAAAT
rJMFF040J15+ CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAGAAGGTGCCTACAATCCTGTGAAAT
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consensus CCTCCTTGCAGGATTAGCGACAAATATCCGAGAAAGAAGGTGCCTACAATCCTGTGAAAT

. : . : . : . : . : . :
rJMFF028B09+ ATGGACATAGTCGGGGAATCTTGTACTGCACAGACATTATACGCTGAATAGTTTTCCTGA
rJMSF010A14+ ATGGACATAGTCGGG-AATCTTGTACTGCACAGACATTATACGCTGA
rJMFF040J15+ ATGGACATAGTCGGG-AATCTTGTACTGCACAGACATTATACGCTGAATAGTTTTCCTGA
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consensus ATGGACATAGTCGGG-AATCTTGTACTGCACAGACATTATACGCTGAATAGTTTTCCTGA

. : . : . : . : . : . :
rJMFF028B09+ AGTTC
rJMFF040J15+ AGTTCTTAGGATCGTCATGGTCTTC
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consensus AGTTCTTAGGATCGTCATGGTCTTC