List of clones in pair P000139.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001I19Sequence556005118 (12)691005578 (11)gb|AAF14242.1|AF110226_15e-35nuclear RNA binding protein [Nicotiana tabacum]
JMFF003B02Sequence500005118 (12)759005578 (11)emb|CDP08361.1|9e-38unnamed protein product [Coffea canephora]
JMFF025E03Sequence525005118 (12)731005578 (11)gb|AAF14242.1|AF110226_11e-35nuclear RNA binding protein [Nicotiana tabacum]
JMFF035I16Sequence559005118 (12)762005578 (11)emb|CDP08361.1|2e-39unnamed protein product [Coffea canephora]
JMFF047D08Sequence590005118 (12)570005578 (11)gb|AAF14242.1|AF110226_12e-15nuclear RNA binding protein [Nicotiana tabacum]
JMFF047P11Sequence590005118 (12)601005578 (11)emb|CDP08361.1|6e-25unnamed protein product [Coffea canephora]
JMFF051M03Sequence558005118 (12)619005578 (11)emb|CDP08361.1|4e-28unnamed protein product [Coffea canephora]
JMFS096B10Sequence620005578 (11)emb|CDP08361.1|4e-58unnamed protein product [Coffea canephora]
JMFS168E01Sequence577005118 (12)
JMSF027C19Sequence746005118 (12)770005578 (11)emb|CDP08361.1|1e-32unnamed protein product [Coffea canephora]
JMSF046C11Sequence750005118 (12)767005578 (11)emb|CDP08361.1|2e-53unnamed protein product [Coffea canephora]
JMSF047H17Sequence702005118 (12)784005578 (11)emb|CDP08361.1|9e-45unnamed protein product [Coffea canephora]

Contig 5118 BLAST Hits against nr-aa DB Show

Contig 5578 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig005118============================================ 842         ============================================Contig005578============================================ 946
  30    ----------------------------------------------------------------->JMFF051M03                                                                    <-----------------------------------------------------------------rJMFF051M03  
  37 ---------------------------------------------------------->JMFF003B02                                                            <-------------------------------------------------------------------------------rJMFF003B02  
  37 ----------------------------------------------------------------->JMFF035I16                                                     <-------------------------------------------------------------------------------rJMFF035I16  
  42 --------------------------------------------------------------------->JMFF047D08                                                                        <--------------------------------------------------------rJMFF047D08  
  42 --------------------------------------------------------------------->JMFF047P11                                                                      <----------------------------------------------------------rJMFF047P11  
  46 ---------------------------------------------------------------------------------->JMSF027C19                                   <-------------------------------------------------------------------------------rJMSF027C19  
  52 ------------------------------------------------------------->JMFF025E03                                                            <---------------------------------------------------------------------------rJMFF025E03  
  63  ----------------------------------------------------------------->JMFF001I19                                                         <------------------------------------------------------------------------rJMFF001I19  
 143        ---------------------------------------------------------------------------------------->JMSF046C11                 <--------------------------------------------------------------------------------rJMSF046C11  
 191                  ---------------------------------------------------------------------------------->JMSF047H17                 <--------------------------------------------------------------------------------rJMSF047H17  
      ----------------------------------------------------------------->JMSF039H17*                                   
               -------------------------------------------------------------------->JMFS168E01-                       
                                                                                                                      ----------------------------------------------------------------->JMFS096B10-