List of clones in pair P009101.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002L22Sequence397011236 (72)683011236 (72)
JMFF009A01Sequence503011236 (72)614011236 (72)
JMFF015G13Sequence635000680 (7)ref|XP_009785778.1|3e-99PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve700000680 (7)gb|KHG20623.1|3e-96DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum
JMFF028M19Sequence482011236 (72)582011236 (72)
JMFF029A07Sequence440011236 (72)680011236 (72)
JMFF030P19Sequence428011236 (72)615011236 (72)
JMFF034O07Sequence510011236 (72)604011236 (72)
JMFF036A21Sequence499011236 (72)681011236 (72)
JMFF037A08Sequence472000680 (7)ref|XP_009785778.1|4e-67PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve687000680 (7)ref|XP_009785778.1|2e-120PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve
JMFF039C02Sequence499011236 (72)685011236 (72)
JMFF046B05Sequence524011236 (72)271011236 (72)
JMFN004I02Sequence616011236 (72)
JMFN005F03Sequence605011236 (72)
JMFN005P08Sequence570011236 (72)
JMFN006F20Sequence362011236 (72)
JMFN006O11Sequence546011236 (72)
JMFN007H16Sequence600011236 (72)
JMFN007K13Sequence613011236 (72)
JMFN008E23Sequence617011236 (72)
JMFN008H04Sequence616011236 (72)
JMFN008J04Sequence551011236 (72)
JMFN009M21Sequence617011236 (72)
JMFN009P01Sequence618011236 (72)
JMFN011A11Sequence546011236 (72)
JMFN011J16Sequence611011236 (72)
JMFN012I16Sequence624011236 (72)
JMFN012N13Sequence578011236 (72)
JMFN013C06Sequence622011236 (72)
JMFN013C08Sequence282011236 (72)ref|XP_009760733.1|3e-06PREDICTED: glycine-rich protein-like [Nicotiana sylvestris] gb|ACZ73651.1| glyci
JMFN013C13Sequence641011236 (72)
JMFN015B05Sequence610011236 (72)
JMFN016C24Sequence574011236 (72)
JMFN016E03Sequence615011236 (72)
JMFN017E11Sequence562011236 (72)
JMFN017P15Sequence605011236 (72)
JMFN029E09Sequence386011236 (72)
JMFN030G16Sequence588011236 (72)
JMFN032G14Sequence605011236 (72)
JMFN034G08Sequence570011236 (72)
JMFN036C17Sequence495011236 (72)
JMFN036P21Sequence623011236 (72)
JMFN037D03Sequence452011236 (72)
JMFN038B20Sequence568011236 (72)
JMFN038E20Sequence633011236 (72)
JMFN038H22Sequence619011236 (72)
JMFN038J22Sequence632011236 (72)
JMFN039B04Sequence593011236 (72)
JMFN040L23Sequence584011236 (72)
JMFN040M12Sequence603011236 (72)
JMFN041B02Sequence645011236 (72)
JMFN041F14Sequence625011236 (72)
JMFN041L15Sequence579011236 (72)
JMFN044F16Sequence648011236 (72)
JMFS018B03Sequence608011236 (72)
JMFS033G06Sequence634011236 (72)
JMFS035H07Sequence489011236 (72)
JMFS041D06Sequence489011236 (72)
JMFS111A09Sequence622011236 (72)
JMSF002K21Sequence313000680 (7)ref|XP_009785778.1|6e-50PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve664011236 (72)
JMSF015F14Sequence495000680 (7)ref|XP_009785778.1|6e-91PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve734000680 (7)ref|XP_009785778.1|2e-111PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylve
JMSF020K05Sequence682011236 (72)659011236 (72)
JMSF030I08Sequence685011236 (72)658011236 (72)
JMSF049P20Sequence711011236 (72)658011236 (72)

Contig 680 BLAST Hits against nr-aa DB Show

Contig 11236 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000680============================================1229         ============================================Contig011236============================================ 754
  93  ------------------------>JMSF002K21                                                                             <----------------------------------------------------------------------------------------rJMSF002K21  

                                                                                                                           ------------------------------------------------------------------------------------>JMFN038E20-  
                                                                                                                         ------------------------------------------------------------------------------------->JMFN013C13-  
                                                                                                                                      <------------------------------------------------------------------------------JMFS111A09-  
                                                                                                                         --------------------------------------------------------------------------------->JMFN011J16-  
                                                                                                                            ---------------------------------------------------------------------------------->JMFN038H22-  
                                                                                                                         ---------------------------------------------------------------------------->JMFN012N13-  
                                                                                                                           -------------------------------------------------------------------------->JMFN017E11-  
                                                                                                                         ----------------------------------------------------------------------------->JMFN040L23-  
                                                                                                                         ---------------------------------------------------------------------------->JMFN039B04-  
                                                                                                                          ------------------------------------------------------------------------------->JMFN007H16-  
                                                                                                                                                    ---------------------------------------------------------------->JMFS041D06-  
                                                                                                                             ------------------------------------------------------------------------>JMFN006O11-  
                                                                                                                             --------------------------------------------------------------------------------->JMFN008H04-  
                                                                                                                                                    ---------------------------------------------------------------->JMFS035H07-  
                                                                                                                           ------------------------------------------------------------------------------------>JMFN044F16-  
                                                                                                                             --------------------------------------------------------------------------------->JMFN016E03-  
                                                                                                                           ---------------------------------------------------------------------------------->JMFN013C06-  
                                                                                                                            ----------------------------------------------------------------------------------->JMFN038J22-  
                                                                                                                                      ------------------------------------------------------------------------------>JMFN032G14-  
                                                                                                                          --------------------------------------------------------------------------------->JMFN004I02-  
                                                                                                                            --------------------------------------------------------------------------------->JMFN009M21-  
                                                                                                                           --------------------------------------------------->JMFN029E09-  
                                                                                                                             ---------------------------------------------------------------------------------->JMFN036P21-  
                                                                                                                            ------------------------------------>JMFN013C08-  
                                                                                                                                       ---------------------------------------------------------------------------->JMFN041L15-  
                                                                                                                           --------------------------------------------------------------------------------->JMFN007K13-  
                                                                                                                            ------------------------------------------------------------------------------------->JMFN041B02-  
                                                                                                                         --------------------------------------------------------------------------------->JMFN015B05-  
                                                                                                                           ------------------------------------------------------------------------------>JMFN030G16-  
                                                                                                                          --------------------------------------------------------------------------------->JMFN008E23-  
                                                                                                                           ---------------------------------------------------------------------------------->JMFN012I16-  
                                                                                                                           ------------------------------------------------------------------------------------>JMFS033G06-  
                                                                                                                           --------------------------------------------------------------------------->JMFN038B20-  
                                                                                                                                            ------------------------------------------------------------------------>JMFN011A11-  
                                                                                                                             ------------------------------------------------------------------------->JMFN008J04-  
                                                                                                                                       <----------------------------------------------------------------------------------JMFN041F14-  
                                                                                                                           ---------------------------------------------------------------------------------->JMFN009P01-  
                                                                                                                                    ----------------------------------------------------------------->JMFN036C17-  
                                                                                                                              -------------------------------------------------------------------------------->JMFS018B03-  
                                                                                                                          ----------------------------------------------------------->JMFN037D03-  
                                                                                                                            <--------------------------------------------------------------------------JMFN040M12-  
                                                                                                                          -------------------------------------------------------------------------------->JMFN017P15-  
                                                                                                                                       --------------------------------------------------------------------------->JMFN005P08-  
                                                                                                                                        ----------------------------------------------->JMFN006F20-  
                                                                                                                          --------------------------------------------------------------------------->JMFN034G08-  
                                                                                                                           -------------------------------------------------------------------------------->JMFN005F03-  
                                                                                                                          ---------------------------------------------------------------------------->JMFN016C24-  
      --------------------------------------------------->JMFF015G13**
                                                <--------------------------------------------------------rJMFF015G13**
     --------------------------------------->JMSF015F14**
      ------------------------------------->JMFF037A08**
                                      <-------------------------------------------------------rJMFF037A08**
                                         <-----------------------------------------------------------rJMSF015F14**
                                                                                                                        <------------------------------------------------------------------------------------------rJMFF036A21**
                                                                                                                       ---------------------------------------------------------->JMFF029A07**
                                                                                                                       <-------------------------------------------------------------------------------------------rJMFF039C02**
                                                                                                                       <---------------------------------------------------------------------------------------rJMSF049P20**
                                                                                                                        ------------------------------------------------->JMFF002L22**
                                                                                                                       <---------------------------------------------------------------------------------------rJMSF020K05**
                                                                                                                                <---------------------------------------------------------------------------------rJMFF030P19**
                                                                                                                       ------------------------------------------------------------------>JMFF009A01**
                                                                                                                       ---------------------------------------------------------------->JMFF039C02**
                                                                                                                                                                                 <-----------------------------------rJMFF046B05**
                                                                                                                       <---------------------------------------------------------------------------------------rJMSF030I08**
                                                                                                                       --------------------------------------------------------------------->JMFF046B05**
                                                                                                                                   <-----------------------------------------------------------------------------rJMFF028M19**
                                                                                                                        <------------------------------------------------------------------------------------------rJMFF029A07**
                                                                                                                                 <---------------------------------------------------------------------------------rJMFF009A01**
                                                                                                                       ------------------------------------------------------------------------------------------>JMSF020K05**
                                                                                                                       -------------------------------------------------------->JMFF030P19**
                                                                                                                       ------------------------------------------------------------------------------------------->JMSF030I08**
                                                                                                                       ------------------------------------------------------------------>JMFF036A21**
                                                                                                                       --------------------------------------------------------------------------------------------->JMSF049P20**
                                                                                                                       ------------------------------------------------------------------->JMFF034O07**
                                                                                                                       --------------------------------------------------------------->JMFF028M19**
                                                                                                                        <------------------------------------------------------------------------------------------rJMFF002L22**
                                                                                                                                <--------------------------------------------------------------------------------rJMFF034O07**