Clone JMFF015G13 [sequences]

contigF:000680 contigR:000680

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
ref\|XP_009785778.1\|	1	204	3e-99	327-635	95-197	+3	12	286	2e-92	221-700	160-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana sylvestris]
ref\|XP_004238992.1\|	3	205	7e-99	327-635	95-197	+3	16	285	4e-92	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum lycopersicum]
ref\|XP_006348609.1\|	4	205	2e-98	327-635	95-197	+3	15	285	3e-92	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Solanum tuberosum]
ref\|XP_009605052.1\|	2	204	4e-99	327-635	95-197	+3	22	282	8e-91	221-700	160-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Nicotiana tomentosiformis]
ref\|XP_007042502.1\|	8	190	3e-94	327-635	95-196	+3	2	295	1e-95	221-700	159-318	-1	318	DNA-directed RNA polymerase family protein [Theobroma cacao] gb\|EOX98333.1\| DNA-directed RNA polymerase family protein [
gb\|KHG20623.1\|	13	187	2e-92	327-635	95-196	+3	1	296	3e-96	221-700	159-318	-1	318	DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum]
gb\|KJB77656.1\|	10	189	3e-93	327-635	95-196	+3	3	293	3e-95	221-700	159-318	-1	318	hypothetical protein B456_012G149200 [Gossypium raimondii]
ref\|XP_011092547.1\|	5	197	2e-96	327-635	95-197	+3	18	285	7e-92	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Sesamum indicum]
emb\|CAN60923.1\|	6	191	2e-94	327-635	95-196	+3	7	289	2e-93	221-700	159-318	-1	318	hypothetical protein VITISV_019338 [Vitis vinifera]
ref\|XP_002285322.1\|	9	191	4e-94	327-635	95-196	+3	6	289	2e-93	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Vitis vinifera] ref\|XP_010647901.1\| PREDICTED: DNA-dire
gb\|KHG04309.1\|	11	187	9e-93	327-635	95-196	+3	5	291	3e-94	221-700	159-318	-1	318	DNA-directed RNA polymerase II subunit RPB3-A -like protein [Gossypium arboreum] gb\|KJB47376.1\| hypothetical protein B4
gb\|EYU42691.1\|	77	194	8e-58	327-635	14-116	+3	10	284	9e-93	221-700	79-238	-1	238	hypothetical protein MIMGU_mgv1a012844mg [Erythranthe guttata]
ref\|XP_002518700.1\|	7	191	2e-94	327-635	95-196	+3	19	285	8e-92	221-700	159-318	-1	318	DNA-directed RNA polymerase II subunit, putative [Ricinus communis] gb\|EEF43625.1\| DNA-directed RNA polymerase II subuni
ref\|XP_004505300.1\|	12	188	1e-92	327-635	95-197	+3	11	286	1e-92	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cicer arietinum]
ref\|XP_003556247.1\|	32	183	5e-89	327-635	96-198	+3	9	288	3e-93	221-700	161-320	-1	320	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Glycine max] gb\|KHN08054.1\| DNA-directed RNA polym
ref\|XP_007157771.1\|	24	185	2e-91	327-635	95-196	+3	17	285	4e-92	221-700	159-318	-1	318	hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris] gb\|ESW29765.1\| hypothetical protein PHAVU_002G097400g [Phase
ref\|XP_010065975.1\|	30	184	5e-90	327-635	98-199	+3	14	286	3e-92	221-700	162-321	-1	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Eucalyptus grandis] gb\|KCW63722.1\| hypothetical pr
ref\|XP_003529425.1\|	34	181	3e-88	327-635	96-197	+3	8	288	2e-93	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Glycine max] gb\|KHN42991.1\| DNA-directed RNA polymerase
ref\|XP_009350515.1\|	16	191	4e-92	327-635	95-196	+3	29	278	2e-89	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
ref\|XP_006422955.1\|	21	182	1e-91	44-322	1-93	+2	13	286	3e-92	221-700	160-319	-1	319	hypothetical protein CICLE_v10028849mg [Citrus clementina] ref\|XP_006487022.1\| PREDICTED: DNA-directed RNA polymerases I
gb\|KDP47129.1\|	22	188	1e-91	327-635	95-195	+3	26	279	1e-89	221-700	158-317	-1	317	hypothetical protein JCGZ_22125 [Jatropha curcas]
emb\|CDO97209.1\|	14	189	2e-92	327-635	95-197	+3	33	277	8e-89	221-700	160-319	-1	319	unnamed protein product [Coffea canephora]
ref\|XP_009335010.1\|	19	188	7e-92	327-635	95-196	+3	30	278	2e-89	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Pyrus x bretschneideri]
ref\|XP_002313865.2\|	18	187	6e-92	327-635	95-201	+3	31	278	3e-89	221-700	164-323	-1	323	DNA-directed RNA polymerase II 36 kDa polypeptide B family protein [Populus trichocarpa] gb\|EEE87820.2\| DNA-directed RN
ref\|XP_011000984.1\|	26	185	3e-91	327-635	95-201	+3	27	279	1e-89	221-700	164-323	-1	323	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Populus euphratica] ref\|XP_011000991.1\| PREDICTED:
ref\|XP_008236569.1\|	17	187	4e-92	327-635	95-196	+3	39	276	2e-88	221-700	159-318	-1	318	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Prunus mume]
gb\|AFK41039.1\|	36	179	5e-88	44-322	1-93	+2	21	284	1e-91	221-700	159-318	-1	318	unknown [Medicago truncatula]
ref\|XP_008373098.1\|	20	187	7e-92	327-635	95-196	+3	38	276	2e-88	221-700	159-318	-1	318	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
ref\|XP_003607895.1\|	31	178	3e-89	44-322	1-93	+2	20	284	1e-91	221-700	159-318	-1	318	DNA-directed RNA polymerase II subunit RPB3-A [Medicago truncatula] gb\|ABC75365.1\| RNA polymerase, dimerisation [Medicag
ref\|XP_007201816.1\|	15	187	3e-92	327-635	95-196	+3	44	274	1e-87	221-700	159-318	-1	318	hypothetical protein PRUPE_ppa008812mg [Prunus persica] gb\|EMJ03015.1\| hypothetical protein PRUPE_ppa008812mg [Prunus pe
ref\|XP_004304034.1\|	27	184	7e-91	327-635	95-196	+3	32	277	7e-89	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Fragaria vesca subsp. vesca]
ref\|XP_010518168.1\|	41	177	3e-87	44-322	1-93	+2	23	281	2e-90	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Camelina sativa]
gb\|AIA09926.1\|	33	181	1e-88	327-635	96-195	+3	36	276	2e-88	221-700	158-317	-1	317	RNA polymerase II [Quercus suber]
ref\|XP_004138895.1\|	23	182	1e-91	327-635	95-198	+3	43	274	8e-88	221-700	161-320	-1	320	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Cucumis sativus] gb\|KGN61343.1\| hypothetical protein Csa
ref\|XP_010467299.1\|	43	176	3e-87	44-322	1-93	+2	24	280	4e-90	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
ref\|XP_010488959.1\|	39	176	2e-87	44-322	1-93	+2	25	279	1e-89	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Camelina sativa]
ref\|XP_008441761.1\|	25	182	2e-91	327-635	95-198	+3	47	273	2e-87	221-700	161-320	-1	320	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 3-like [Cucumis melo]
ref\|XP_008367672.1\|	35	177	5e-88	44-322	1-93	+2	37	276	2e-88	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Malus domestica]
ref\|XP_002883895.1\|	47	174	1e-86	44-322	1-93	+2	28	278	2e-89	221-700	160-319	-1	319	RBP36A [Arabidopsis lyrata subsp. lyrata] gb\|EFH60154.1\| RBP36A [Arabidopsis lyrata subsp. lyrata]
ref\|XP_010275045.1\|	37	179	6e-88	44-322	1-93	+2	48	273	3e-87	221-700	162-321	-1	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
ref\|XP_010241296.1\|	52	176	4e-86	44-322	1-93	+2	35	276	2e-88	221-700	162-321	-1	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Nelumbo nucifera]
ref\|XP_006298158.1\|	44	175	5e-87	44-322	1-93	+2	34	276	1e-88	221-700	160-319	-1	319	hypothetical protein CARUB_v10014208mg [Capsella rubella] gb\|EOA31056.1\| hypothetical protein CARUB_v10014208mg [Capsell
ref\|XP_010691712.1\|	29	182	3e-90	327-635	95-197	+3	53	268	2e-85	221-700	160-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Beta vulgaris subsp. vulgaris] ref\|XP_010691713.1\| PRED
ref\|XP_006409557.1\|	54	174	9e-86	327-635	145-247	+3	42	276	5e-88	221-700	210-369	-1	369	hypothetical protein EUTSA_v10022739mg [Eutrema salsugineum] gb\|ESQ51010.1\| hypothetical protein EUTSA_v10022739mg [Eutr
ref\|NP_179145.1\|	49	176	1e-86	44-322	1-93	+2	46	273	2e-87	221-700	160-319	-1	319	DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis thaliana] sp\|Q39211.1\|NRPB3_ARATH RecName: Full=DNA-directed
ref\|XP_006853170.1\|	53	176	5e-86	44-322	1-93	+2	50	272	1e-86	221-700	163-322	-1	324	hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda] gb\|ERN14637.1\| hypothetical protein AMTR_s00038p0019405
gb\|KFK40018.1\|	42	175	3e-87	327-635	96-198	+3	49	272	5e-87	221-700	161-320	-1	320	hypothetical protein AALP_AA3G319300 [Arabis alpina]
ref\|XP_006393120.1\|	56	171	6e-85	50-322	4-94	+2	40	275	4e-88	221-700	161-320	-1	320	hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum] gb\|ESQ30406.1\| hypothetical protein EUTSA_v10011661mg [Eutr
gb\|AAM65319.1\|	55	173	1e-85	44-322	1-93	+2	45	273	2e-87	221-700	160-319	-1	319	DNA-directed RNA polymerase II, third largest subunit [Arabidopsis thaliana]
ref\|XP_010526970.1\|	40	175	2e-87	327-635	95-196	+3	51	270	3e-86	221-700	159-318	-1	318	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Tarenaya hassleriana]
emb\|CDY62312.1\|	51	175	2e-86	50-322	4-94	+2	52	270	7e-86	221-700	159-318	-1	318	BnaCnng39910D [Brassica napus]
gb\|AFK49173.1\|	78	181	7e-53	327-635	14-115	+3	57	263	2e-84	221-700	78-237	-1	237	unknown [Lotus japonicus]
ref\|XP_009119413.1\|	38	175	2e-87	50-322	4-94	+2	54	268	2e-85	221-700	160-319	-1	319	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa] emb\|CDY36631.1\| BnaA07g04260D [Brassica
emb\|CBI40277.3\|	207	154	1e-42	381-635	1-84	+3	4	289	5e-95	221-700	47-206	-1	206	unnamed protein product [Vitis vinifera]
gb\|EPS71627.1\|	60	176	2e-81	44-322	1-93	+2	56	266	2e-84	224-700	162-320	-1	320	hypothetical protein M569_03132 [Genlisea aurea]
ref\|XP_009123235.1\|	50	174	2e-86	50-322	4-94	+2	59	265	4e-84	221-700	162-321	-1	321	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Brassica rapa]
emb\|CDY37227.1\|	48	174	1e-86	50-322	4-94	+2	60	263	2e-83	221-700	162-321	-1	321	BnaA09g08480D [Brassica napus]
ref\|XP_001765827.1\|	62	161	2e-79	44-322	1-93	+2	41	275	4e-88	221-700	163-322	-1	324	predicted protein [Physcomitrella patens] gb\|EDQ69418.1\| predicted protein [Physcomitrella patens]
ref\|XP_002883894.1\|	57	167	5e-82	327-635	95-197	+3	55	268	4e-85	221-700	160-319	-1	319	RBP36A [Arabidopsis lyrata subsp. lyrata] gb\|EFH60153.1\| RBP36A [Arabidopsis lyrata subsp. lyrata]
ref\|NP_179142.1\|	73	155	4e-75	327-635	95-197	+3	58	265	3e-84	221-700	160-319	-1	319	DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] sp\|Q39212.2\|RPD3B_ARATH RecName: Full=DNA-directed
ref\|XP_002983424.1\|	69	162	1e-75	53-322	3-92	+2	62	258	3e-81	221-700	160-319	-1	320	hypothetical protein SELMODRAFT_180179 [Selaginella moellendorffii] gb\|EFJ15766.1\| hypothetical protein SELMODRAFT_18017
ref\|NP_001062572.1\|	68	169	5e-77	50-322	7-97	+2	65	251	1e-78	221-700	175-330	-1	330	Os09g0110400 [Oryza sativa Japonica Group] dbj\|BAD17541.1\| putative DNA-directed RNA polymerase II [Oryza sativa Japonic
ref\|XP_002960614.1\|	70	162	1e-75	53-322	3-92	+2	63	256	1e-80	221-700	160-319	-1	320	hypothetical protein SELMODRAFT_75337 [Selaginella moellendorffii] gb\|EFJ38153.1\| hypothetical protein SELMODRAFT_75337
ref\|XP_006660419.1\|	64	170	2e-77	50-322	7-97	+2	68	246	1e-76	221-700	175-330	-1	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Oryza brachyantha]
gb\|AAB03740.1\|	72	155	4e-75	327-635	95-197	+3	61	260	4e-82	221-700	160-319	-1	319	RNA polymerase II third largest subunit [Arabidopsis thaliana]
ref\|XP_010943195.1\|	61	165	4e-80	47-322	3-94	+2	67	249	7e-78	221-700	167-322	-1	323	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3 [Elaeis guineensis]
gb\|ADE77570.1\|	63	164	7e-79	53-322	9-98	+2	66	250	4e-78	221-700	168-327	-1	330	unknown [Picea sitchensis]
ref\|XP_009418294.1\|	58	167	6e-82	56-322	15-103	+2	69	244	4e-76	230-700	175-327	-1	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Musa acuminata subsp. malaccensis]
ref\|XP_003576823.1\|	75	169	2e-74	50-322	7-97	+2	73	234	4e-72	230-700	175-327	-1	330	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Brachypodium distachyon]
ref\|XP_004956290.1\|	71	169	1e-75	50-322	7-97	+2	74	228	2e-69	224-700	171-324	-1	325	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like [Setaria italica]
ref\|XP_002462055.1\|	67	169	5e-77	50-322	6-96	+2	76	226	1e-68	224-700	174-327	-1	328	hypothetical protein SORBIDRAFT_02g014460 [Sorghum bicolor] gb\|EER98576.1\| hypothetical protein SORBIDRAFT_02g014460 [So
gb\|EMS46394.1\|	76	161	4e-66	50-322	7-98	+2	72	234	4e-72	284-700	160-298	-1	315	DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
ref\|NP_001149261.1\|	65	168	2e-77	50-322	6-96	+2	77	223	9e-68	224-700	174-327	-1	328	LOC100282883 [Zea mays] gb\|ACG34756.1\| DNA-directed RNA polymerase II 36 kDa polypeptide A [Zea mays] gb\|ACN31311.1\| unk
dbj\|BAN19962.1\|	169	147	2e-43	327-635	29-138	+3	71	239	8e-75	224-700	101-256	-1	257	RNA polymerase II, partial [Echinochloa phyllopogon]
ref\|XP_007200659.1\|	79	136	2e-52	44-322	1-82	+2	75	225	5e-69	221-637	152-290	-1	290	hypothetical protein PRUPE_ppa016873mg [Prunus persica] gb\|EMJ01858.1\| hypothetical protein PRUPE_ppa016873mg [Prunus pe
emb\|CDX71220.1\|	45	175	6e-87	50-322	4-94	+2	80	172	6e-47	377-700	160-267	-1	444	BnaC07g04990D [Brassica napus]
emb\|CDX71219.1\|	46	174	6e-87	50-322	4-94	+2	79	172	1e-48	377-700	160-267	-1	282	BnaC07g04980D [Brassica napus]
ref\|XP_010107867.1\|	28	182	1e-90	44-322	1-93	+2	87	149	5e-38	221-511	492-588	-1	588	DNA-directed RNA polymerase II subunit [Morus notabilis] gb\|EXC17267.1\| DNA-directed RNA polymerase II subunit [Morus no
gb\|EMS66673.1\|	84	169	1e-48	50-322	7-97	+2	98	121	4e-29	221-499	217-305	-1	305	DNA-directed RNA polymerase II subunit RPB3-A [Triticum urartu]
tpg\|DAA39561.1\|	66	167	4e-77	50-322	6-96	+2	99	120	6e-29	494-700	174-242	-1	260	TPA: hypothetical protein ZEAMMB73_135001 [Zea mays]
ref\|NP_001077894.1\|	74	155	1e-74	327-635	95-197	+3	97	120	3e-29	488-700	160-230	-1	235	DNA-directed RNA polymerase II subunit RPB3-B [Arabidopsis thaliana] gb\|AEC06398.1\| DNA-directed RNA polymerase II subun
ref\|XP_001767451.1\|	81	119	1e-51	50-322	17-109	+2	88	144	5e-37	275-700	176-330	-1	385	predicted protein [Physcomitrella patens] gb\|EDQ67775.1\| predicted protein [Physcomitrella patens]
ref\|XP_002504237.1\|	125	106	2e-44	47-310	5-92	+2	82	157	4e-42	260-700	178-324	-1	331	dna-directed RNA polymerase II polypeptide a [Micromonas sp. RCC299] gb\|ACO65495.1\| dna-directed RNA polymerase II poly
ref\|XP_003060124.1\|	232	101	2e-40	62-310	9-91	+2	81	162	3e-44	266-700	177-324	-1	333	predicted protein [Micromonas pusilla CCMP1545] gb\|EEH56076.1\| predicted protein [Micromonas pusilla CCMP1545]
ref\|XP_011397782.1\|	91	107	3e-46	342-635	97-195	+3	83	155	8e-42	299-700	158-291	-1	313	DNA-directed RNA polymerases II, IV and V subunit 3 [Auxenochlorella protothecoides] gb\|KFM24894.1\| DNA-directed RNA po
ref\|XP_005643055.1\|	83	114	6e-50	65-298	9-86	+2	86	146	2e-38	299-697	156-288	-1	303	DNA-directed RNA polymerase II, 36 kDa polypeptide [Coccomyxa subellipsoidea C-169] gb\|EIE18511.1\| DNA-directed RNA pol
gb\|EMT28290.1\|							64	248	5e-79	221-700	37-192	-1	192	DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
gb\|EMT18475.1\|							70	242	5e-76	221-700	100-255	-1	255	DNA-directed RNA polymerase II subunit RPB3-A [Aegilops tauschii]
ref\|XP_629750.1\|	89	107	1e-46	336-635	97-192	+3	91	134	5e-34	299-700	155-290	-1	302	RNA polymerase II core subunit [Dictyostelium discoideum AX4] sp\|Q54DH7.1\|RPB3_DICDI RecName: Full=DNA-directed RNA poly
ref\|XP_003290595.1\|	101	107	2e-45	65-313	10-92	+2	92	134	1e-33	269-700	156-303	-1	303	RNA polymerase II core subunit [Dictyostelium purpureum] gb\|EGC32876.1\| RNA polymerase II core subunit [Dictyostelium pu
gb\|EFA85790.1\|	90	112	3e-46	65-313	7-89	+2	94	128	1e-31	266-700	149-295	-1	295	RNA polymerase II core subunit [Polysphondylium pallidum PN500]
ref\|XP_004355278.1\|	86	112	2e-47	65-313	7-89	+2	96	123	8e-30	299-700	152-285	-1	296	RNA polymerase II core subunit [Dictyostelium fasciculatum] gb\|EGG16804.1\| RNA polymerase II core subunit [Dictyostelium
ref\|XP_007509325.1\|	191	105	4e-43	351-635	94-188	+3	93	130	1e-32	266-700	151-295	-1	298	DNA-directed RNA polymerase II subunit RPB3 [Bathycoccus prasinos] emb\|CCO19782.1\| DNA-directed RNA polymerase II subuni
ref\|XP_008907224.1\|	98	115	2e-45	59-316	3-93	+2	101	119	3e-28	254-700	157-309	-1	319	hypothetical protein PPTG_13362 [Phytophthora parasitica INRA-310] gb\|ETI44008.1\| hypothetical protein F443_11228 [Phyto
emb\|CCA16494.1\|	97	113	2e-45	65-316	5-93	+2	100	120	1e-28	254-700	157-309	-1	319	DNAdirected RNA polymerase II 36 kDa polypeptide A putative [Albugo laibachii Nc14]
ref\|XP_001416207.1\|	243	104	8e-40	354-635	99-190	+3	95	129	1e-31	281-697	154-309	-1	318	DNA-directed RNA polymerase II subunit 3 [Ostreococcus lucimarinus CCE9901] gb\|ABO94500.1\| DNA-directed RNA polymerase
emb\|CCI41220.1\|	95	113	1e-45	65-316	5-93	+2	102	119	5e-28	254-700	157-309	-1	319	unnamed protein product [Albugo candida]
ref\|XP_008869633.1\|	127	116	2e-44	62-316	4-93	+2	105	114	2e-26	287-700	157-298	-1	321	hypothetical protein H310_06366 [Aphanomyces invadans] gb\|ETW01785.1\| hypothetical protein H310_06366 [Aphanomyces invad
ref\|XP_009839409.1\|	136	115	3e-44	65-316	5-93	+2	106	114	2e-26	287-700	157-298	-1	321	hypothetical protein H257_13554 [Aphanomyces astaci] gb\|ETV71163.1\| hypothetical protein H257_13554 [Aphanomyces astaci]
gb\|KDO29260.1\|	151	114	6e-44	59-316	3-93	+2	108	113	5e-26	287-700	157-298	-1	321	RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein [Saprolegnia parasitica CBS 223.65]
ref\|XP_008612909.1\|	186	114	3e-43	59-316	3-93	+2	107	113	5e-26	287-700	157-298	-1	321	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Saprolegnia diclina VS20] gb\|EQC33686.1\| RNA polymera
ref\|XP_007199459.1\|	80	141	3e-52	47-322	7-88	+2	177	80.9	7e-15	458-637	146-205	-1	253	hypothetical protein PRUPE_ppa026986mg [Prunus persica] gb\|EMJ00658.1\| hypothetical protein PRUPE_ppa026986mg [Prunus pe
ref\|XP_001702786.1\|	242	110	8e-40	65-316	11-98	+2	110	108	1e-24	335-700	153-274	-1	275	DNA-directed RNA polymerase II, 36 kDa polypeptide [Chlamydomonas reinhardtii] gb\|EDP06565.1\| DNA-directed RNA polymera
ref\|XP_002948375.1\|	236	100	3e-40	107-316	1-74	+2	104	116	2e-27	335-700	129-250	-1	272	hypothetical protein VOLCADRAFT_88650 [Volvox carteri f. nagariensis] gb\|EFJ50782.1\| hypothetical protein VOLCADRAFT_886
dbj\|GAM20367.1\|	82	119	3e-50	41-316	1-91	+2	143	85.1	2e-16	503-700	152-217	-1	227	hypothetical protein SAMD00019534_035420, partial [Acytostelium subglobosum LB1]
ref\|XP_009514985.1\|	96	115	1e-45	59-316	3-93	+2	186	80.1	1e-14	488-700	157-227	-1	242	hypothetical protein PHYSODRAFT_554134 [Phytophthora sojae] gb\|EGZ27710.1\| hypothetical protein PHYSODRAFT_554134 [Phyto
ref\|XP_002997739.1\|	103	115	3e-45	59-316	3-93	+2	191	79.7	1e-14	488-700	157-227	-1	241	DNA-directed RNA polymerase II 36 kDa polypeptide A [Phytophthora infestans T30-4] gb\|EEY68040.1\| DNA-directed RNA poly
ref\|XP_008907225.1\|	100	115	2e-45	59-316	3-93	+2	206	78.6	4e-14	488-700	157-227	-1	240	hypothetical protein, variant [Phytophthora parasitica INRA-310] gb\|ETI44009.1\| hypothetical protein, variant [Phytophth
ref\|XP_008236581.1\|							78	191	6e-57	221-637	75-204	-1	204	PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like [Prunus mume]
gb\|KIY95324.1\|							84	150	2e-39	266-700	152-300	-1	383	DNA-directed RNA polymerase II subunit RPB3-A [Monoraphidium neglectum]
gb\|KDD74543.1\|							85	144	5e-39	290-697	5-140	-1	156	hypothetical protein H632_c1241p1 [Helicosporidium sp. ATCC 50920]
ref\|XP_005848659.1\|							89	137	4e-35	254-700	125-275	-1	283	hypothetical protein CHLNCDRAFT_144215 [Chlorella variabilis] gb\|EFN56557.1\| hypothetical protein CHLNCDRAFT_144215 [Chl
ref\|XP_003074839.1\|							90	135	4e-34	257-697	154-300	-1	301	Rpb3 DNA-directed RNA polymerase II subunit 3 (IC) [Ostreococcus tauri] emb\|CAL52099.2\| DNA-directed RNA polymerase, 30
ref\|XP_002181139.1\|							103	118	1e-27	296-700	168-308	-1	320	predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb\|EEC47062.1\| predicted protein [Phaeodactylum tricornutum CC
gb\|ACO12911.1\|	87	115	2e-47	59-313	3-88	+2							279	DNA-directed RNA polymerase II subunit RPB3 [Lepeophtheirus salmonis]
gb\|KFH73292.1\|	222	115	1e-41	71-313	9-89	+2							282	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mortierella verticillata NRRL 6337]
gb\|EIE89120.1\|	99	114	2e-45	50-313	4-92	+2							201	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus delemar RA 99-880]
emb\|CEG69748.1\|	102	113	3e-45	50-313	4-92	+2							280	Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus]
ref\|XP_002158521.1\|	88	111	6e-47	59-313	3-88	+2							273	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Hydra vulgaris]
ref\|XP_001471367.1\|							109	111	3e-25	287-700	157-294	-1	310	DNA-directed rna polymerase II subunit [Tetrahymena thermophila] sp\|P16925.1\|CNJC_TETTH RecName: Full=Conjugation stage-
ref\|XP_002741050.1\|	92	110	5e-46	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Saccoglossus kowalevskii]
ref\|XP_011418634.1\|	94	110	6e-46	59-313	3-88	+2							273	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Crassostrea gigas]
ref\|XP_003731306.1\|	226	110	2e-41	339-623	81-174	+3							262	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like, partial [Strongylocentrotus purpuratus]
ref\|XP_956964.1\|	238	110	3e-40	71-316	16-97	+2							337	DNA-directed RNA polymerase II polypeptide [Neurospora crassa OR74A] ref\|XP_009851939.1\| hypothetical protein NEUTE1DRA
ref\|XP_005102061.1\|	85	109	1e-47	59-313	3-88	+2							280	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Aplysia californica]
ref\|XP_781436.3\|	229	109	6e-41	339-623	207-300	+3							388	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like isoform 1, partial [Strongylocentrotus purpuratus]
ref\|XP_006692108.1\|	240	109	4e-40	71-316	17-98	+2							344	RNA polymerase II subunit 3-like protein [Chaetomium thermophilum var. thermophilum DSM 1495] gb\|EGS23116.1\| RNA polyme
ref\|XP_002415909.1\|	105	108	6e-45	59-313	3-88	+2							274	RNA polymerase II, subunit POLR2C/RPB3, putative [Ixodes scapularis] gb\|EEC19576.1\| RNA polymerase II, subunit POLR2C/RP
gb\|KFM80578.1\|	196	108	6e-43	59-313	3-88	+2							274	DNA-directed RNA polymerase II subunit RPB3, partial [Stegodyphus mimosarum]
ref\|XP_003739027.1\|	219	108	7e-42	59-313	3-88	+2							277	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Metaseiulus occidentalis]
ref\|XP_002594919.1\|	93	107	5e-46	59-313	3-88	+2							275	hypothetical protein BRAFLDRAFT_277672 [Branchiostoma floridae] gb\|EEN50930.1\| hypothetical protein BRAFLDRAFT_277672 [B
ref\|XP_008485524.1\|	111	107	8e-45	339-623	94-189	+3							191	PREDICTED: DNA-directed RNA polymerase II subunit RPB3, partial [Diaphorina citri]
ref\|XP_011260585.1\|	132	107	3e-44	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Camponotus floridanus] gb\|EFN65520.1\| DNA-directed RNA polymera
gb\|AIK22454.1\|	133	107	3e-44	59-313	3-88	+2							269	DNA-directed RNA polymerase II polypeptide C, partial [Mytilus edulis]
gb\|EPB91568.1\|	165	107	1e-43	50-313	4-92	+2							280	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Mucor circinelloides f. circinelloides 1006PhL]
dbj\|GAN11086.1\|	172	107	2e-43	50-313	28-116	+2							304	conserved hypothetical protein [Mucor ambiguus]
gb\|EFX86636.1\|	185	107	2e-43	59-313	3-88	+2							274	hypothetical protein DAPPUDRAFT_313021 [Daphnia pulex]
emb\|CEP13513.1\|	190	107	4e-43	50-313	4-92	+2							280	hypothetical protein [Parasitella parasitica]
emb\|CBJ28486.1\|	246	107	1e-39	65-316	5-88	+2							262	conserved unknown protein [Ectocarpus siliculosus]
ref\|XP_001439135.1\|							111	106	1e-23	254-700	149-294	-1	297	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK71738.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_002289111.1\|							112	106	1e-23	296-700	157-297	-1	297	RP3A,-like protein to dna-directed RNA polymerase II third largest subunit [Thalassiosira pseudonana CCMP1335] gb\|EED94
ref\|XP_004521442.1\|	118	106	1e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Ceratitis capitata]
ref\|XP_011190744.1\|	119	106	1e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Bactrocera cucurbitae] ref\|XP_011197774.1\| PREDICTED: DNA-direc
gb\|ELT93136.1\|	164	106	1e-43	339-623	94-184	+3							270	hypothetical protein CAPTEDRAFT_155833 [Capitella teleta]
gb\|EFW98980.1\|	233	106	2e-40	71-316	16-97	+2							362	RNA polymerase 2 subunit 3 [Grosmannia clavigera kw1407]
ref\|XP_008476147.1\|	249	106	1e-39	339-623	183-278	+3							363	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Diaphorina citri]
ref\|XP_006641241.1\|	104	105	5e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Lepisosteus oculatus]
ref\|XP_003439459.1\|	106	105	7e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Oreochromis niloticus] ref\|XP_004566178.1\| PREDICTED: DNA-
ref\|XP_005796323.1\|	107	105	7e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Xiphophorus maculatus] ref\|XP_007558553.1\| PREDICTED: DNA-
gb\|KDR14837.1\|	113	105	9e-45	339-623	94-189	+3							276	DNA-directed RNA polymerase II subunit RPB3 [Zootermopsis nevadensis]
ref\|XP_001450201.1\|							113	105	2e-23	254-700	160-305	-1	308	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK82804.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_003792622.1\|	120	105	2e-44	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Otolemur garnettii]
ref\|XP_008295027.1\|	122	105	2e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Stegastes partitus]
ref\|XP_002668960.1\|	124	105	2e-44	74-313	12-91	+2							324	predicted protein [Naegleria gruberi] gb\|EFC36216.1\| predicted protein [Naegleria gruberi]
ref\|XP_005181593.1\|	141	105	4e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Musca domestica]
ref\|XP_002079394.1\|	144	105	5e-44	59-313	3-88	+2							275	GD23930 [Drosophila simulans] gb\|EDX04979.1\| GD23930 [Drosophila simulans]
ref\|XP_002088649.1\|	146	105	5e-44	59-313	3-88	+2							275	GE18688 [Drosophila yakuba] gb\|EDW88361.1\| GE18688 [Drosophila yakuba]
ref\|NP_477419.1\|	147	105	5e-44	59-313	3-88	+2							275	RNA polymerase II 33kD subunit [Drosophila melanogaster] emb\|CAB38635.1\| RNA polymerase II p33 subunit [Drosophila melan
ref\|XP_001988351.1\|	150	105	6e-44	59-313	3-88	+2							275	GH11119 [Drosophila grimshawi] ref\|XP_002002474.1\| GI12561 [Drosophila mojavensis] ref\|XP_002057472.1\| GJ18149 [Drosophi
ref\|XP_002064793.1\|	152	105	6e-44	59-313	3-88	+2							275	GK15011 [Drosophila willistoni] gb\|EDW75779.1\| GK15011 [Drosophila willistoni]
ref\|XP_001356237.1\|	153	105	8e-44	59-313	3-88	+2							275	GA20659 [Drosophila pseudoobscura pseudoobscura] ref\|XP_002023215.1\| GL21238 [Drosophila persimilis] gb\|EAL33299.1\| GA20
ref\|XP_002035764.1\|	160	105	9e-44	59-313	3-88	+2							275	GM15286 [Drosophila sechellia] gb\|EDW51687.1\| GM15286 [Drosophila sechellia]
ref\|XP_003486021.1\|	173	105	2e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Bombus impatiens]
ref\|XP_011161410.1\|	181	105	2e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Solenopsis invicta]
ref\|XP_003699728.1\|	184	105	2e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Megachile rotundata]
ref\|XP_624836.1\|	187	105	3e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Apis mellifera] ref\|XP_003698555.1\| PREDICTED: DNA-directe
ref\|XP_011143954.1\|	212	105	3e-42	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Harpegnathos saltator] gb\|EFN81625.1\| DNA-directed RNA polymera
ref\|XP_003398295.1\|	221	105	1e-41	339-623	91-186	+3							273	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Bombus terrestris]
emb\|CCE43818.1\|	248	105	1e-39	62-313	4-87	+2							317	hypothetical protein CPAR2_500440 [Candida parapsilosis]
ref\|XP_006261724.1\|	108	104	8e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator mississippiensis]
ref\|XP_006035547.1\|	109	104	8e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Alligator sinensis]
ref\|XP_005152356.1\|	110	104	8e-45	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Melopsittacus undulatus]
ref\|NP_001232142.1\|	112	104	8e-45	59-313	3-88	+2							275	putative DNA directed RNA polymerase II polypeptide C [Taeniopygia guttata] ref\|XP_005052452.1\| PREDICTED: DNA-directed
gb\|EJK63419.1\|							114	104	7e-23	296-700	172-312	-1	323	hypothetical protein THAOC_15929 [Thalassiosira oceanica]
ref\|NP_001161428.1\|	117	104	1e-44	59-313	3-88	+2							275	DNA-directed RNA polymerase II subunit RPB3 [Danio rerio] gb\|AAH46047.1\| Polymerase (RNA) II (DNA directed) polypeptide
ref\|XP_004069860.1\|	123	104	2e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Oryzias latipes]
ref\|NP_001280231.1\|	145	104	5e-44	59-313	3-88	+2							275	DNA-directed RNA polymerase II subunit RPB3 [Gallus gallus]
gb\|EHJ78455.1\|	163	104	1e-43	59-313	3-88	+2							275	DNA-directed RNA polymerase II polypeptide [Danaus plexippus]
gb\|EFZ17186.1\|	188	104	4e-43	339-623	94-189	+3							325	hypothetical protein SINV_07940 [Solenopsis invicta]
ref\|XP_002111988.1\|	203	104	1e-42	336-623	93-189	+3							274	hypothetical protein TRIADDRAFT_24132 [Trichoplax adhaerens] gb\|EDV25955.1\| hypothetical protein TRIADDRAFT_24132 [Trich
emb\|CDH51848.1\|	224	104	1e-41	50-313	4-93	+2							280	rna polymerase rpb3 rpb11 dimerization domain-containing protein [Lichtheimia corymbifera JMRC:FSU:9682]
emb\|CDS03118.1\|	225	104	1e-41	50-313	4-93	+2							280	Putative RNA polymerase Rpb3/Rpb11 dimerizationdomain-containing protein [Absidia idahoensis var. thermophila]
ref\|XP_003228630.1\|	114	103	1e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Anolis carolinensis]
ref\|XP_003757327.1\|	116	103	1e-44	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 isoform 1 [Sarcophilus harrisii]
ref\|XP_003355849.1\|	121	103	2e-44	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Sus scrofa] ref\|XP_004670779.1\| PREDICTED: DNA-directed RNA poly
ref\|XP_004690587.1\|	126	103	2e-44	59-322	3-90	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Condylura cristata]
ref\|XP_001365715.1\|	128	103	2e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Monodelphis domestica]
ref\|NP_989124.1\|	129	103	3e-44	59-313	3-88	+2							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Xenopus (Silurana) tropicalis] gb\|AAH61444.1\| polymerase (RNA)
ref\|NP_001084998.1\|	131	103	3e-44	330-623	91-189	+3							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Xenopus laevis] gb\|AAH70601.1\| MGC81245 protein [Xenopus laevi
ref\|XP_003967131.1\|	134	103	3e-44	330-623	91-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Takifugu rubripes]
ref\|XP_007883969.1\|	135	103	3e-44	330-623	91-189	+3							275	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB3 [Callorhinchus milii]
ref\|NP_001029384.1\|	137	103	3e-44	59-313	3-88	+2							275	DNA-directed RNA polymerase II subunit RPB3 [Bos taurus] ref\|XP_535283.2\| PREDICTED: DNA-directed RNA polymerase II subu
ref\|XP_004264975.1\|	138	103	4e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Orcinus orca] ref\|XP_004313267.1\| PREDICTED: DNA-directed RNA p
emb\|CAF98942.1\|	139	103	4e-44	330-623	91-189	+3							275	unnamed protein product, partial [Tetraodon nigroviridis]
ref\|XP_011498580.1\|	143	103	4e-44	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Ceratosolen solmsi marchali]
ref\|XP_006148487.1\|	148	103	5e-44	59-313	71-156	+2							343	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tupaia chinensis]
ref\|XP_005873579.1\|	154	103	8e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Myotis brandtii] gb\|EPQ12264.1\| DNA-directed RNA polymerase II
ref\|XP_970635.1\|	156	103	8e-44	59-313	3-88	+2							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tribolium castaneum] gb\|EFA03015.1\| hypothetical protein TcasGA
ref\|XP_006098765.1\|	158	103	9e-44	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Myotis lucifugus] ref\|XP_006105249.1\| PREDICTED: DNA-direc
gb\|ACO09755.1\|	161	103	1e-43	330-623	91-189	+3							275	DNA-directed RNA polymerase II 33 kDa polypeptide [Osmerus mordax]
ref\|XP_004704704.1\|	179	103	2e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Echinops telfairi]
ref\|XP_010747372.1\|	183	103	2e-43	330-623	91-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Larimichthys crocea]
ref\|XP_009066251.1\|	189	103	4e-43	339-623	94-188	+3							275	hypothetical protein LOTGIDRAFT_197656 [Lottia gigantea] gb\|ESO83069.1\| hypothetical protein LOTGIDRAFT_197656 [Lottia g
ref\|XP_011065530.1\|	197	103	7e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Acromyrmex echinatior]
ref\|XP_001628658.1\|	204	103	1e-42	59-313	3-88	+2							274	predicted protein [Nematostella vectensis] gb\|EDO36595.1\| predicted protein [Nematostella vectensis]
emb\|CEJ02675.1\|	209	103	2e-42	50-277	4-80	+2							272	Putative RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Rhizopus microsporus] emb\|CEI98448.1\| Putati
ref\|XP_002119306.2\|	210	103	3e-42	32-313	36-130	+2							319	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like isoform X1 [Ciona intestinalis] ref\|XP_009857626.1\| PREDICT
ref\|XP_005422907.1\|	235	103	2e-40	330-623	76-174	+3							260	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Geospiza fortis]
ref\|XP_005446895.1\|	244	103	8e-40	330-623	106-204	+3							290	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Falco cherrug]
ref\|XP_001228344.1\|	247	103	1e-39	71-316	16-97	+2							338	hypothetical protein CHGG_10417 [Chaetomium globosum CBS 148.51] gb\|EAQ84013.1\| hypothetical protein CHGG_10417 [Chaetom
ref\|XP_008309823.1\|	140	102	4e-44	330-623	91-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cynoglossus semilaevis]
ref\|NP_001040388.1\|	142	102	4e-44	59-313	3-88	+2							275	DNA-directed RNA polymerase II polypeptide [Bombyx mori] gb\|ABF51298.1\| DNA-directed RNA polymerase II polypeptide [Bomb
ref\|XP_002426352.1\|	149	102	5e-44	339-623	94-189	+3							275	DNA-directed RNA polymerase II 33 kDa polypeptide, putative [Pediculus humanus corporis] gb\|EEB13614.1\| DNA-directed RN
ref\|XP_010637190.1\|	155	102	8e-44	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Fukomys damarensis]
gb\|ELW66196.1\|	157	102	8e-44	59-313	435-520	+2							707	DNA-directed RNA polymerase II subunit RPB3 [Tupaia chinensis]
dbj\|BAH13217.1\|	159	102	9e-44	339-623	94-189	+3							424	unnamed protein product [Homo sapiens]
ref\|XP_008066216.1\|	162	102	1e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Tarsius syrichta]
ref\|NP_033116.2\|	166	102	1e-43	339-623	94-189	+3							275	DNA-directed RNA polymerase II subunit RPB3 [Mus musculus] ref\|NP_001012491.1\| DNA-directed RNA polymerase II subunit RP
dbj\|BAB23943.1\|	167	102	1e-43	339-623	94-189	+3							275	unnamed protein product [Mus musculus]
ref\|XP_006752933.1\|	168	102	1e-43	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Myotis davidii] gb\|ELK38451.1\| DNA-directed RNA polymerase II s
gb\|EDL87316.1\|	170	102	2e-43	339-623	94-189	+3							241	polymerase (RNA) II (DNA directed) polypeptide C, isoform CRA_a [Rattus norvegicus]
gb\|AEE63493.1\|	171	102	2e-43	339-623	94-189	+3							275	unknown [Dendroctonus ponderosae] gb\|ENN72896.1\| hypothetical protein YQE_10466, partial [Dendroctonus ponderosae] gb\|ER
ref\|XP_003416333.1\|	174	102	2e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Loxodonta africana]
ref\|XP_004371607.1\|	175	102	2e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Trichechus manatus latirostris]
gb\|AAA36586.1\|	176	102	2e-43	339-623	94-189	+3							275	RNA polymerase subunit hRPB 33 [Homo sapiens] emb\|CAA11842.1\| RNA polymerase II subunit [Homo sapiens] emb\|CAA11843.1\| R
ref\|NP_116558.1\|	177	102	2e-43	339-623	94-189	+3							275	DNA-directed RNA polymerase II subunit RPB3 [Homo sapiens] ref\|NP_001245048.1\| DNA-directed RNA polymerase II subunit RP
ref\|XP_006897193.1\|	178	102	2e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Elephantulus edwardii]
ref\|XP_002711589.1\|	180	102	2e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Oryctolagus cuniculus] ref\|XP_004583942.1\| PREDICTED: DNA-direc
ref\|XP_007228370.1\|	182	102	2e-43	330-623	91-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Astyanax mexicanus]
ref\|NP_001135345.1\|	193	102	4e-43	330-623	91-189	+3							275	DNA-directed RNA polymerase II subunit RPB3 [Salmo salar] gb\|ACI68248.1\| DNA-directed RNA polymerase II subunit RPB3 [Sa
ref\|XP_011351433.1\|	194	102	5e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cerapachys biroi] gb\|EZA61007.1\| DNA-directed RNA polymerase II
ref\|XP_007610346.1\|	199	102	8e-43	339-623	94-189	+3							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Cricetulus griseus]
ref\|XP_008549234.1\|	200	102	9e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Microplitis demolitor]
ref\|XP_003384595.1\|	201	102	1e-42	59-313	3-88	+2							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Amphimedon queenslandica]
gb\|KFO26949.1\|	213	102	4e-42	339-623	92-187	+3							273	DNA-directed RNA polymerase II subunit RPB3 [Fukomys damarensis]
ref\|XP_001659470.1\|	214	102	4e-42	59-313	3-88	+2							275	AAEL008755-PA [Aedes aegypti] gb\|EAT39449.1\| AAEL008755-PA [Aedes aegypti]
ref\|XP_006680656.1\|	217	102	4e-42	56-313	6-95	+2							285	hypothetical protein BATDEDRAFT_20338 [Batrachochytrium dendrobatidis JAM81] gb\|EGF78507.1\| hypothetical protein BATDED
gb\|ETN64477.1\|	218	102	5e-42	59-313	3-88	+2							273	DNA-directed RNA polymerase II subunit [Anopheles darlingi]
ref\|XP_002473129.1\|	250	102	2e-39										265	predicted protein [Postia placenta Mad-698-R] gb\|EED81699.1\| predicted protein, partial [Postia placenta Mad-698-R]
ref\|NP_001291019.1\|	192	101	4e-43	330-623	91-189	+3							275	polymerase (RNA) II (DNA directed) polypeptide C, 33kDa [Esox lucius] gb\|ACO13863.1\| DNA-directed RNA polymerase II sub
ref\|XP_011306562.1\|	195	101	5e-43	339-623	94-189	+3							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Fopius arisanus]
dbj\|BAE23500.1\|	198	101	7e-43	56-313	2-88	+2							332	unnamed protein product [Mus musculus]
ref\|XP_005345644.1\|	205	101	1e-42	339-623	94-189	+3							275	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB3 [Microtus ochrogaster]
ref\|XP_008205458.1\|	208	101	2e-42	59-313	3-88	+2							276	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Nasonia vitripennis]
ref\|XP_318245.2\|	215	101	4e-42	59-313	3-88	+2							273	AGAP010321-PA [Anopheles gambiae str. PEST] gb\|EAA13388.2\| AGAP010321-PA [Anopheles gambiae str. PEST]
gb\|KFB45912.1\|	216	101	4e-42	59-313	3-88	+2							273	AGAP010321-PA-like protein [Anopheles sinensis]
ref\|XP_006088697.1\|	220	101	8e-42	59-313	3-88	+2							274	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Myotis lucifugus]
gb\|EWM29508.1\|							115	100	1e-21	287-697	116-255	-1	267	rna polymerase ii core subunit, partial [Nannochloropsis gaditana]
ref\|XP_009306510.1\|							116	100	2e-21	275-697	147-296	-1	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma grayi] gb\|KEG15249.1\| DNA-directed RNA polymerase II subunit 3 [Tr
dbj\|BAE01792.1\|	202	100	1e-42	59-313	3-88	+2							251	unnamed protein product [Macaca fascicularis]
gb\|ACI66208.1\|	206	100	1e-42	59-313	3-88	+2							275	DNA-directed RNA polymerase II subunit RPB3 [Salmo salar]
ref\|XP_006887722.1\|	211	100	3e-42	59-313	3-88	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3-like [Elephantulus edwardii]
sp\|P97760.1\|RPB3_MOUSE	223	100	1e-41	59-313	3-88	+2							275	RecName: Full=DNA-directed RNA polymerase II subunit RPB3; Short=RNA polymerase II subunit 3; Short=RNA polymerase II s
ref\|XP_009024941.1\|	227	100	3e-41	59-313	3-88	+2							273	hypothetical protein HELRODRAFT_86044 [Helobdella robusta] gb\|ESN96826.1\| hypothetical protein HELRODRAFT_86044 [Helobde
ref\|XP_009024924.1\|	228	100	3e-41	59-313	3-88	+2							273	hypothetical protein HELRODRAFT_85938 [Helobdella robusta] gb\|ESN96823.1\| hypothetical protein HELRODRAFT_85938 [Helobde
gb\|ESS68208.1\|							117	99.8	4e-21	275-697	147-296	-1	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma cruzi Dm28c]
gb\|EKF98383.1\|							118	99.8	5e-21	275-697	175-324	-1	365	DNA-directed RNA polymerase II subunit 3, putative [Trypanosoma cruzi]
gb\|EPZ35785.1\|	231	99.8	1e-40	71-316	8-98	+2							282	DNA-directed RNA polymerase, insert domain-containing protein [Rozella allomycis CSF55]
dbj\|GAA27309.2\|	245	99.8	1e-39	339-623	94-187	+3							266	DNA-directed RNA polymerase II subunit RPB3 [Clonorchis sinensis]
gb\|EKF33119.1\|							119	99.4	5e-21	275-697	147-296	-1	337	DNA-directed RNA polymerase II subunit 3, putative [Trypanosoma cruzi marinkellei]
gb\|KII92453.1\|	234	99.4	2e-40	71-313	9-90	+2							367	hypothetical protein PLICRDRAFT_37223 [Plicaturopsis crispa FD-325 SS-3]
gb\|ESA10282.1\|	237	98.6	3e-40	71-316	10-91	+2							279	hypothetical protein GLOINDRAFT_348258 [Rhizophagus irregularis DAOM 181602]
gb\|EXX68254.1\|	239	98.6	3e-40	71-316	10-91	+2							279	Rpb3p [Rhizophagus irregularis DAOM 197198w]
ref\|XP_818836.1\|							121	98.2	1e-20	287-697	173-316	-1	363	DNA-directed RNA polymerase II subunit 3 [Trypanosoma cruzi strain CL Brener] gb\|EAN96985.1\| DNA-directed RNA polymeras
emb\|CBK22749.2\|							120	97.8	1e-20	287-700	154-290	-1	312	unnamed protein product [Blastocystis hominis]
ref\|XP_007520161.1\|	230	97.1	1e-40	59-280	3-76	+2							275	PREDICTED: DNA-directed RNA polymerase II subunit RPB3 [Erinaceus europaeus]
gb\|ESL08184.1\|							122	96.3	6e-20	287-697	147-290	-1	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma rangeli SC58]
ref\|XP_002142225.1\|							123	95.9	9e-20	299-700	156-307	-1	348	DNA-directed RNA polymerase II subunit RPB3 [Cryptosporidium muris RN66] gb\|EEA07876.1\| DNA-directed RNA polymerase II
ref\|XP_002773904.1\|							124	94.0	4e-19	245-700	168-318	-1	336	conjugation stage-specific protein, putative [Perkinsus marinus ATCC 50983] gb\|EER05720.1\| conjugation stage-specific p
ref\|XP_004035127.1\|							125	91.3	2e-18	299-700	162-295	-1	307	hypothetical protein IMG5_105540 [Ichthyophthirius multifiliis] gb\|EGR31641.1\| hypothetical protein IMG5_105540 [Ichthyo
gb\|EUR70396.1\|							126	91.3	3e-18	287-700	195-324	-1	333	hypothetical protein PFBG_03623 [Plasmodium falciparum 7G8]
ref\|XP_001348113.1\|							127	91.3	3e-18	287-700	195-324	-1	333	DNA-directed RNA polymerase I, putative [Plasmodium falciparum 3D7] gb\|AAN36026.1\|AE014842_48 DNA-directed RNA polymera
emb\|CDO65232.1\|							128	90.1	8e-18	287-700	195-324	-1	333	DNA-directed RNA polymerase I, putative [Plasmodium reichenowi]
gb\|KDO59170.1\|							130	90.1	1e-17	290-700	244-377	-1	382	hypothetical protein CISIN_1g016805mg [Citrus sinensis] gb\|KDO59171.1\| hypothetical protein CISIN_1g016805mg [Citrus sin
ref\|XP_006474843.1\|							131	90.1	1e-17	290-700	244-377	-1	382	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Citrus sinensis]
gb\|EUR54704.1\|							129	89.7	1e-17	302-700	195-319	-1	319	hypothetical protein PFBG_06059, partial [Plasmodium falciparum 7G8]
ref\|XP_006452630.1\|							134	89.7	3e-17	290-700	283-416	-1	421	hypothetical protein CICLE_v10008413mg [Citrus clementina] gb\|ESR65870.1\| hypothetical protein CICLE_v10008413mg [Citrus
ref\|XP_001612274.1\|							132	89.4	1e-17	302-700	180-303	-1	319	DNA-directed RNA polymerase, alpha subunit, N terminal domain containing protein [Babesia bovis] gb\|EDO08706.1\| DNA-dir
ref\|XP_003880837.1\|							133	89.4	2e-17	302-700	207-330	-1	346	rna polymerase II, related [Neospora caninum Liverpool] emb\|CBZ50804.1\| rna polymerase II, related [Neospora caninum Liv
dbj\|BAN65959.1\|							136	88.6	4e-17	287-700	203-347	-1	382	DNA-directed RNA polymerase II, putative [Babesia bovis]
gb\|EPR60376.1\|							140	88.6	1e-16	299-697	309-446	-1	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii GT1] gb\|KFG34038.1\| DNA-directed RNA polymerase II RPB3 [Toxoplas
gb\|KFG39349.1\|							141	88.6	1e-16	299-697	309-446	-1	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii p89] gb\|KFG99589.1\| DNA-directed RNA polymerase II RPB3 [Toxoplas
gb\|KFH02814.1\|							142	88.6	1e-16	299-697	309-446	-1	484	DNA-directed RNA polymerase II RPB3 [Toxoplasma gondii MAS]
ref\|XP_008887664.1\|							138	88.2	4e-17	302-700	207-330	-1	346	DNA-directed RNA polymerase I RPAC1 [Hammondia hammondi] gb\|KEP61675.1\| DNA-directed RNA polymerase I RPAC1 [Hammondia h
gb\|EPY40328.1\|							135	87.8	4e-17	275-697	111-260	-1	301	DNA-directed RNA polymerase II subunit RPB3 [Angomonas deanei] gb\|EPY41503.1\| DNA-directed RNA polymerase II subunit RPB
gb\|EPY29248.1\|							137	87.8	4e-17	275-700	147-297	-1	338	DNA-directed RNA polymerase II subunit RPB3 [Angomonas deanei] gb\|EPY35318.1\| DNA-directed RNA polymerase II subunit RPB
ref\|XP_002368807.1\|							139	87.8	5e-17	302-700	207-330	-1	346	DNA-directed RNA polymerases I and III subunit RPAC1, putative [Toxoplasma gondii ME49] gb\|EPR57260.1\| DNA-directed RNA
ref\|XP_002366511.1\|							150	87.0	3e-16	299-697	309-446	-1	484	DNA-directed RNA polymerase II, putative [Toxoplasma gondii ME49] gb\|EPT30854.1\| DNA-directed RNA polymerase II RPB3 [To
ref\|XP_009412082.1\|							144	86.7	2e-16	290-700	232-363	-1	368	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Musa acuminata subsp. malaccensis]
ref\|XP_003600393.1\|							145	86.7	3e-16	290-700	252-394	-1	399	DNA-directed RNA polymerase subunit D [Medicago truncatula] gb\|AES70644.1\| DNA-directed RNA polymerase [Medicago truncat
ref\|XP_008349337.1\|							146	86.3	3e-16	290-700	256-389	-1	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Malus domestica]
ref\|XP_002300385.1\|							147	86.3	3e-16	290-700	252-385	-1	390	DNA-directed RNA polymerase family protein [Populus trichocarpa] gb\|EEE85190.1\| DNA-directed RNA polymerase family prote
ref\|XP_009349148.1\|							148	86.3	3e-16	290-700	256-389	-1	394	PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases I and III subunit rpac1-like [Pyrus x bretschneideri]
emb\|CCC89910.1\|							149	86.3	3e-16	260-697	207-356	-1	392	unnamed protein product [Trypanosoma congolense IL3000]
ref\|XP_008887556.1\|							157	86.3	7e-16	299-697	309-446	-1	484	DNA-directed RNA polymerase II RPB3 [Hammondia hammondi] gb\|KEP61891.1\| DNA-directed RNA polymerase II RPB3 [Hammondia h
ref\|XP_001608910.1\|							151	85.9	3e-16	287-700	203-347	-1	382	DNA-directed RNA polymerase II [Babesia bovis T2Bo] gb\|EDO05342.1\| DNA-directed RNA polymerase II, putative [Babesia bov
ref\|XP_009367231.1\|							153	85.9	4e-16	290-700	256-389	-1	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X2 [Pyrus x bretschneideri] ref\|XP_0093794
emb\|CCW67473.1\|							152	85.5	4e-16	275-697	148-297	-1	338	unnamed protein product [Phytomonas sp. isolate Hart1]
ref\|XP_011038839.1\|							154	85.5	5e-16	290-700	252-385	-1	390	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Populus euphratica] ref\|XP_011038840.1\| PREDICTED: DNA
ref\|XP_004498147.1\|							155	85.5	5e-16	290-700	250-383	-1	388	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Cicer arietinum]
ref\|XP_009367230.1\|							156	85.5	6e-16	290-700	256-390	-1	395	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1 [Pyrus x bretschneideri] ref\|XP_0093794
ref\|XP_009791015.1\|							159	84.7	1e-15	290-700	261-393	-1	398	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 isoform X1 [Nicotiana sylvestris] ref\|XP_009791016.1\| P
emb\|CDR11955.1\|							158	84.3	8e-16	287-700	198-327	-1	336	DNA-directed RNA polymerase I, putative [Plasmodium chabaudi chabaudi]
ref\|XP_004488284.1\|							164	84.3	1e-15	290-700	250-383	-1	388	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Cicer arietinum]
gb\|EUD73052.1\|							162	84.0	1e-15	287-700	198-327	-1	336	DNA-directed RNA polymerase I and III subunit RPAC1 [Plasmodium vinckei petteri]
emb\|CCW59538.1\|							163	84.0	1e-15	275-697	148-297	-1	338	unnamed protein product [Phytomonas sp. isolate EM1]
ref\|XP_004251939.1\|							166	84.0	2e-15	290-700	256-388	-1	393	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Solanum lycopersicum] ref\|XP_010313951.1\| PREDICTED: D
gb\|EMD49037.1\|							160	83.6	1e-15	299-697	140-272	-1	283	DNA-directed RNA polymerase II subunit, putative [Entamoeba histolytica KU27] gb\|EMS14826.1\| DNA-directed RNA polymeras
ref\|XP_008857990.1\|							161	83.6	1e-15	299-697	140-272	-1	283	DNA-directed RNA polymerase, alpha subunit, N-terminal domain containing protein [Entamoeba nuttalli P19] gb\|EKE39676.1
ref\|XP_010676084.1\|							167	83.6	2e-15	290-700	221-352	-1	357	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Beta vulgaris subsp. vulgaris]
gb\|KDP39298.1\|							168	83.6	2e-15	290-700	238-371	-1	376	hypothetical protein JCGZ_01055 [Jatropha curcas]
ref\|XP_009407931.1\|							169	83.6	2e-15	290-700	234-365	-1	370	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Musa acuminata subsp. malaccensis]
ref\|XP_001737769.1\|							165	82.8	2e-15	299-697	140-272	-1	283	DNA-directed RNA polymerase subunit D [Entamoeba dispar SAW760] gb\|EDR25860.1\| DNA-directed RNA polymerase subunit D, pu
ref\|XP_668386.1\|							171	82.8	3e-15	290-700	157-317	-1	355	conjugation stage-specific protein [Cryptosporidium hominis TU502]
ref\|XP_651491.1\|							170	82.4	3e-15	299-697	140-272	-1	283	DNA-directed RNA polymerase II subunit [Entamoeba histolytica HM-1:IMSS] gb\|EAL46103.1\| DNA-directed RNA polymerase II
ref\|XP_009597355.1\|							176	82.4	7e-15	290-700	256-388	-1	393	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Nicotiana tomentosiformis]
ref\|XP_008384587.1\|							178	82.4	7e-15	290-700	256-389	-1	394	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X2 [Malus domestica]
ref\|XP_003881797.1\|							187	82.4	1e-14	299-697	322-459	-1	514	hypothetical protein NCLIV_015560 [Neospora caninum Liverpool] emb\|CBZ51764.1\| hypothetical protein NCLIV_015560 [Neospo
ref\|XP_005840731.1\|							172	82.0	4e-15	266-697	164-318	-1	319	hypothetical protein GUITHDRAFT_100722 [Guillardia theta CCMP2712] gb\|EKX53751.1\| hypothetical protein GUITHDRAFT_100722
ref\|XP_628094.1\|							179	82.0	7e-15	290-700	157-317	-1	355	RNA polymerase II B3 subunit [Cryptosporidium parvum Iowa II] gb\|EAK88359.1\| RNA polymerase II B3 subunit [Cryptosporidi
ref\|XP_008384586.1\|							180	82.0	9e-15	290-700	256-390	-1	395	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like isoform X1 [Malus domestica]
ref\|XP_006344900.1\|							181	82.0	9e-15	290-700	256-388	-1	393	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like [Solanum tuberosum]
gb\|KJB12014.1\|							173	81.6	5e-15	290-700	166-298	-1	303	hypothetical protein B456_002G1021002, partial [Gossypium raimondii]
ref\|XP_008624975.1\|							175	81.6	6e-15	287-700	196-325	-1	334	DNA-directed RNA polymerase I and III subunit RPAC1 [Plasmodium vinckei vinckei] gb\|KEG02362.1\| DNA-directed RNA polyme
emb\|CDR95474.1\|							189	81.6	1e-14	287-700	226-370	-1	402	DNA-directed RNA polymerase II, putative [Babesia bigemina]
ref\|XP_011461865.1\|							192	81.6	1e-14	296-700	260-391	-1	398	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Fragaria vesca subsp. vesca]
ref\|XP_007020446.1\|							174	81.3	6e-15	290-700	133-265	-1	270	DNA-directed RNA polymerases I and III subunit rpac1 isoform 3 [Theobroma cacao] gb\|EOY11971.1\| DNA-directed RNA polyme
ref\|XP_008218433.1\|							194	81.3	2e-14	290-700	256-389	-1	394	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Prunus mume]
emb\|CDW73871.1\|							184	80.9	1e-14	299-700	176-310	-1	325	rna polymerase ii core subunit [Stylonychia lemnae]
ref\|XP_007020445.1\|							185	80.9	1e-14	290-700	174-306	-1	311	RNA polymerase I subunit 43 isoform 2 [Theobroma cacao] gb\|EOY11970.1\| RNA polymerase I subunit 43 isoform 2 [Theobroma
ref\|XP_007020447.1\|							188	80.9	1e-14	290-700	186-318	-1	323	RNA polymerase I subunit 43 isoform 4 [Theobroma cacao] gb\|EOY11972.1\| RNA polymerase I subunit 43 isoform 4 [Theobroma
ref\|XP_008384583.1\|							193	80.9	2e-14	290-700	219-352	-1	357	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Malus domestica]
ref\|XP_007205309.1\|							197	80.9	2e-14	290-700	256-389	-1	394	hypothetical protein PRUPE_ppa006811mg [Prunus persica] gb\|EMJ06508.1\| hypothetical protein PRUPE_ppa006811mg [Prunus pe
ref\|XP_007020444.1\|							199	80.9	3e-14	290-700	246-378	-1	383	RNA polymerase I subunit 43 isoform 1 [Theobroma cacao] gb\|EOY11969.1\| RNA polymerase I subunit 43 isoform 1 [Theobroma
ref\|WP_004030361.1\|							182	80.5	1e-14	290-700	130-257	-1	266	DNA-directed RNA polymerase subunit D [Methanobacterium formicicum] gb\|EKF85921.1\| DNA-directed RNA polymerase subunit D
ref\|XP_001444646.1\|							190	80.5	1e-14	299-700	185-310	-1	316	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK77249.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_844140.1\|							195	80.5	2e-14	260-697	147-301	-1	337	DNA-directed RNA polymerase II subunit 3 [Trypanosoma brucei brucei TREU927] gb\|AAX81059.1\| DNA-directed RNA polymerase
ref\|XP_002139766.1\|							196	80.5	2e-14	275-700	214-347	-1	351	DNA-directed RNA polymerases I and III subunit RPAC1 [Cryptosporidium muris RN66] gb\|EEA05417.1\| DNA-directed RNA polym
ref\|XP_676509.1\|							198	80.1	2e-14	272-700	198-334	-1	334	DNA-directed RNA polymerase I [Plasmodium berghei strain ANKA] emb\|CAH97452.1\| DNA-directed RNA polymerase I, putative [
ref\|XP_765556.1\|							200	80.1	3e-14	203-700	164-346	-1	354	DNA-directed RNA polymerase II [Theileria parva strain Muguga] gb\|EAN33273.1\| DNA-directed RNA polymerase II, putative [
gb\|KFH65202.1\|							204	80.1	4e-14	242-700	210-354	-1	357	DNA-directed RNA Polymerase III subunit C5 [Mortierella verticillata NRRL 6337]
ref\|XP_002547167.1\|							201	79.7	3e-14	287-700	201-331	-1	337	DNA-directed RNA polymerases I and III 40 kDa polypeptide [Candida tropicalis MYA-3404] gb\|EER34612.1\| DNA-directed RNA
gb\|EAR92630.3\|							203	79.7	4e-14	281-700	207-338	-1	339	DNA-directed RNA polymerase I and III subunit RPAC1 [Tetrahymena thermophila SB210]
ref\|XP_003866410.1\|							205	79.7	4e-14	287-700	201-330	-1	336	Rpc40 RNA polymerase [Candida orthopsilosis Co 90-125] emb\|CCG20970.1\| Rpc40 RNA polymerase [Candida orthopsilosis Co 90
gb\|EYU27454.1\|							207	79.7	5e-14	290-700	244-376	-1	381	hypothetical protein MIMGU_mgv1a008198mg [Erythranthe guttata]
ref\|XP_010248371.1\|							208	79.7	5e-14	290-700	235-367	-1	372	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Nelumbo nucifera]
gb\|KJB74905.1\|							211	79.3	6e-14	308-700	211-336	-1	340	hypothetical protein B456_012G013700 [Gossypium raimondii]
ref\|XP_010942580.1\|							213	79.3	6e-14	290-700	231-362	-1	367	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Elaeis guineensis]
emb\|CEA12664.1\|							202	79.0	4e-14	290-700	130-257	-1	266	DNA-directed RNA polymerase subunit D [Methanobacterium formicicum] gb\|AIS31200.1\| DNA-directed RNA polymerase subunit D
ref\|XP_001615546.1\|							212	79.0	6e-14	263-700	195-333	-1	333	DNA-directed RNA polymerase I [Plasmodium vivax Sal-1] gb\|EDL45819.1\| DNA-directed RNA polymerase I, putative [Plasmodiu
ref\|XP_954676.1\|							217	79.0	8e-14	203-700	164-346	-1	354	DNA-directed RNA polymerase ii [Theileria annulata] emb\|CAI73996.1\| DNA-directed RNA polymerase ii, putative [Theileria
ref\|XP_003562359.1\|							219	79.0	9e-14	290-700	224-355	-1	360	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 [Brachypodium distachyon]
ref\|XP_010534813.1\|							221	79.0	1e-13	290-700	242-374	-1	379	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Tarenaya hassleriana]
ref\|WP_011751955.1\|							209	78.6	5e-14	296-700	137-261	-1	283	RNA polymerase, insert [Thermofilum pendens] ref\|YP_919693.1\| RNA polymerase, insert [Thermofilum pendens Hrk 5] gb\|ABL7
ref\|WP_008514834.1\|							210	78.6	5e-14	290-700	130-257	-1	266	DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Methanobacterium sp. Maddingley MBC34] gb\|EKQ53003.1\| DNA-dir
ref\|XP_002259436.1\|							216	78.6	8e-14	287-700	195-324	-1	333	DNA-diDNA-directed RNA polymerase I [Plasmodium knowlesi strain H] emb\|CAQ40209.1\| DNA-diDNA-directed RNA polymerase I,
emb\|CDS12355.1\|							224	78.6	1e-13	254-700	207-350	-1	352	hypothetical protein LRAMOSA04550 [Absidia idahoensis var. thermophila]
ref\|XP_729812.1\|							214	78.2	7e-14	272-700	149-285	-1	286	DNA-directed RNA polymerases I and III 40 kDa polypeptide [Plasmodium yoelii yoelii 17XNL] gb\|EAA21377.1\| DNA-directed
ref\|XP_002896889.1\|							218	78.2	8e-14	296-700	148-277	-1	304	DNA-directed RNA polymerases I and III 40 kDa polypeptide [Phytophthora infestans T30-4] gb\|EEY66588.1\| DNA-directed RN
ref\|XP_001445184.1\|							220	78.2	1e-13	299-700	185-310	-1	316	hypothetical protein [Paramecium tetraurelia strain d4-2] emb\|CAK77787.1\| unnamed protein product [Paramecium tetraureli
ref\|XP_004829485.1\|							223	78.2	1e-13	284-700	180-307	-1	315	DNA-directed RNA polymerase I, putative [Babesia equi] gb\|AFZ79819.1\| DNA-directed RNA polymerase I, putative [Babesia e
ref\|XP_002896890.1\|							227	78.2	1e-13	296-700	183-312	-1	339	DNA-directed RNA polymerase I and III subunit RPAC1, putative [Phytophthora infestans T30-4] gb\|EEY66589.1\| DNA-directe
ref\|XP_004222652.1\|							228	78.2	1e-13	287-700	195-324	-1	333	DNA-directed RNA polymerase I, partial [Plasmodium cynomolgi strain B] dbj\|GAB66705.1\| DNA-directed RNA polymerase I, p
gb\|ETL99722.1\|							229	78.2	1e-13	296-700	187-316	-1	344	hypothetical protein L917_03475 [Phytophthora parasitica]
gb\|ETB57477.1\|							230	78.2	1e-13	272-700	198-334	-1	335	hypothetical protein YYC_04366 [Plasmodium yoelii 17X] emb\|CDU17846.1\| DNA-directed RNA polymerase I, putative [Plasmodi
ref\|XP_008915724.1\|							231	78.2	1e-13	296-700	187-316	-1	344	hypothetical protein PPTG_19124 [Phytophthora parasitica INRA-310] gb\|ETI55259.1\| hypothetical protein F443_02053 [Phyto
ref\|XP_002997258.1\|							232	78.2	1e-13	296-700	187-316	-1	343	DNA-directed RNA polymerase I and III subunit RPAC1, putative [Phytophthora infestans T30-4] gb\|EEY69491.1\| DNA-directe
ref\|XP_001773900.1\|							233	78.2	2e-13	290-700	224-355	-1	360	predicted protein [Physcomitrella patens] gb\|EDQ61248.1\| predicted protein [Physcomitrella patens]
ref\|XP_002270559.1\|							235	78.2	2e-13	290-700	235-367	-1	372	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Vitis vinifera] ref\|XP_010644604.1\| PREDICTED: DNA-dir
ref\|XP_004956050.1\|							238	78.2	2e-13	290-700	236-367	-1	372	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Setaria italica]
ref\|XP_011130152.1\|							225	77.8	1e-13	296-697	110-265	-1	300	putative DNA-directed RNA polymerase II, partial [Gregarina niphandrodes] gb\|EZG67819.1\| putative DNA-directed RNA polym
ref\|XP_001466520.1\|							234	77.8	2e-13	278-697	148-292	-1	337	DNA-directed RNA polymerase I-like protein [Leishmania infantum JPCM5] ref\|XP_003862432.1\| DNA-directed RNA polymerase
emb\|CCC47320.1\|							237	77.8	2e-13	287-697	147-290	-1	337	putative DNA-directed RNA polymerase II subunit 3 [Trypanosoma vivax Y486]
ref\|NP_001049823.1\|							240	77.8	2e-13	290-700	236-374	-1	379	Os03g0295400 [Oryza sativa Japonica Group] gb\|ABF95431.1\| RNA polymerase Rpb3/Rpb11 dimerisation domain containing prote
ref\|XP_007146596.1\|							242	77.8	3e-13	290-700	248-381	-1	386	hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris] gb\|ESW18590.1\| hypothetical protein PHAVU_006G053600g [Phase
ref\|XP_008384584.1\|							222	77.4	1e-13	290-700	132-265	-1	270	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like [Malus domestica]
ref\|XP_008797751.1\|							236	77.4	2e-13	290-700	182-313	-1	318	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X2 [Phoenix dactylifera]
ref\|XP_008816250.1\|							239	77.4	2e-13	287-700	195-324	-1	333	DNA-directed RNA polymerase I and III subunit RPAC1 [Plasmodium inui San Antonio 1] gb\|EUD67279.1\| DNA-directed RNA pol
ref\|XP_010248372.1\|							241	77.4	3e-13	290-700	208-340	-1	345	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X2 [Nelumbo nucifera]
ref\|XP_002453469.1\|							244	77.4	3e-13	290-700	234-365	-1	370	hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor] gb\|EES06445.1\| hypothetical protein SORBIDRAFT_04g006420 [So
ref\|XP_008797750.1\|							245	77.4	3e-13	290-700	231-362	-1	367	PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1 isoform X1 [Phoenix dactylifera]
ref\|XP_003682332.1\|							247	77.0	3e-13	287-700	199-329	-1	335	hypothetical protein TDEL_0F03100 [Torulaspora delbrueckii] emb\|CCE93121.1\| hypothetical protein TDEL_0F03100 [Torulaspo
ref\|XP_010064071.1\|							243	76.6	3e-13	290-700	156-289	-1	294	PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 isoform X2 [Eucalyptus grandis]
gb\|EPY23512.1\|							246	76.6	3e-13	260-697	111-265	-1	301	DNA-directed RNA polymerase II subunit RPB3 [Strigomonas culicis]
ref\|XP_002774720.1\|							248	76.6	4e-13	233-700	152-294	-1	310	DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC 50983] gb\|EER06536.1\| DNA-directed RNA polymerase I, pu
emb\|CDR95985.1\|							249	76.6	4e-13	287-700	180-308	-1	319	DNA-directed RNA polymerase, alpha subunit, N terminal domain containing protein, putative [Babesia bigemina]
gb\|KDE02207.1\|							250	76.6	4e-13				342	RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein [Microbotryum violaceum p1A1 Lamole]
ref\|XP_002897134.1\|							226	75.5	1e-13	254-613	1-124	-1	134	conserved hypothetical protein [Phytophthora infestans T30-4] gb\|EEY65416.1\| conserved hypothetical protein [Phytophthor
gb\|KHG01265.1\|							183	1	81.6				380	DNA-directed RNA polymerases I and III subunit RPAC1 [Gossypium arboreum]
emb\|CDH56512.1\|							215	1	79.0				352	dna-directed rna polymerases i and iii subunitrpac1 [Lichtheimia corymbifera JMRC:FSU:9682]
gb\|AAZ32911.1\|	59	t	167										184	DNA-directed RNA polymerase II third largest subunit [Medicago sativa]
dbj\|BAD06460.1\|	115	t	104										275	homologue of DNA-directed RNA polymerase II subunit [Antheraea pernyi] dbj\|BAD06461.1\| homologue of DNA-directed RNA po
ref\|NP_001156090.1\|	130	e	107										273	DNA-directed RNA polymerase II polypeptide-like [Acyrthosiphon pisum] dbj\|BAH71223.1\| ACYPI001769 [Acyrthosiphon pisum]
ref\|XP_009289087.1\|	241	0	101										550	PREDICTED: uncharacterized protein LOC103908430 [Aptenodytes forsteri]