List of clones in pair P008255.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF016O21Sequence612000778 (22)ref|XP_009625859.1|4e-34PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]760000778 (22)ref|XP_009625859.1|4e-83PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]
JMFF021I13Sequence519000778 (22)ref|XP_009625859.1|8e-26PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]705000778 (22)emb|CBI24963.3|2e-94unnamed protein product [Vitis vinifera]
JMFF028J02Sequence540000778 (22)ref|XP_009625859.1|1e-22PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]609000778 (22)emb|CBI24963.3|5e-56unnamed protein product [Vitis vinifera]
JMFN037O02Sequence574000778 (22)emb|CDP17822.1|4e-77unnamed protein product [Coffea canephora]
JMSF006G09Sequence419008655 (4)ref|XP_009611208.1|6e-51PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like i
JMSF006G11Sequence266000778 (22)489008655 (4)ref|XP_006362231.1|3e-47PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [
JMSF012G19Sequence246000778 (22)775000778 (22)emb|CBI24963.3|1e-124unnamed protein product [Vitis vinifera]
JMSF019E17Sequence545000778 (22)ref|XP_009625859.1|2e-32PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]763000778 (22)emb|CDP17822.1|1e-118unnamed protein product [Coffea canephora]
JMSF025M05Sequence660000778 (22)ref|XP_009625859.1|2e-60PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]783000778 (22)emb|CDP17822.1|2e-120unnamed protein product [Coffea canephora]
JMSF026K06Sequence651000778 (22)ref|XP_009625859.1|1e-40PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]714000778 (22)emb|CBI24963.3|3e-107unnamed protein product [Vitis vinifera]
JMSF032B12Sequence672000778 (22)ref|XP_009625859.1|3e-63PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]755000778 (22)emb|CDP17822.1|4e-114unnamed protein product [Coffea canephora]
JMSF037P18Sequence652000778 (22)ref|XP_009625859.1|2e-48PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]731000778 (22)emb|CBI24963.3|1e-96unnamed protein product [Vitis vinifera]
JMSF041L13Sequence750000778 (22)ref|XP_009625859.1|3e-83PREDICTED: 50S ribosomal protein L1, chloroplastic [Nicotiana tomentosiformis]748000778 (22)emb|CBI24963.3|6e-85unnamed protein product [Vitis vinifera]
JMSF047H18Sequence655008655 (4)ref|XP_009611208.1|1e-75PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like i756008655 (4)ref|XP_004249168.1|2e-80PREDICTED: non-structural maintenance of chromosomes element 4 homolog A [Solan

Contig 778 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000778============================================1448         
  31   ------------------------------------>JMFF028J02                                                                
                                                               <-----------------------------------------rJMFF028J02  
  42  ----------------------------------------->JMFF016O21                                                            
                                                  <----------------------------------------------------rJMFF016O21  
 101 -------------------------------------------->JMSF026K06                                                          
                                                 <------------------------------------------------rJMSF026K06  
 142      --------------------------------------------------->JMSF041L13                                              
                                                  <--------------------------------------------------rJMSF041L13  
 154      --------------------------------------------->JMSF032B12                                                    
                                               <---------------------------------------------------rJMSF032B12  
 158      ----------------------------------->JMFF021I13                                                              
                                                  <------------------------------------------------rJMFF021I13  
 159      --------------------------------------------->JMSF025M05                                                    
                                             <-----------------------------------------------------rJMSF025M05  
 162      ------------------------------------->JMSF019E17                                                            
                                              <----------------------------------------------------rJMSF019E17  
 207      ----------------------------------------->JMSF037P18                                                        
                                                    <-------------------------------------------rJMSF037P18  
 212      ---------------->JMSF012G19                                                                                 
                                         <-----------------------------------------------------rJMSF012G19  

The following clones don't have the opposite end in this pair.

          ----------------->JMSF006G11*                                                                               
                                                          ------------------------->JMFN037O02-