List of clones in pair P007382.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003F22Sequence560007459 (10)ref|XP_006355348.1|146PREDICTED: uncharacterized protein LOC102586632 [Solanum tuberosum]710007459 (10)ref|XP_009626044.1|1e-109PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis]
JMFF022D22Sequence520002109 (20)ref|XP_011048475.1|1e-62PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Pop760002109 (20)ref|XP_011079046.1|8e-88PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic-like [S
JMFF022M23Sequence229007459 (10)732007459 (10)ref|XP_009626044.1|7e-114PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis]
JMFF027F24Sequence528002109 (20)ref|XP_007043436.1|1e-66Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet682002109 (20)ref|XP_009592880.1|2e-88PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti
JMFF032N22Sequence533002109 (20)ref|XP_007043436.1|2e-65Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet209002109 (20)
JMFF042E08Sequence628007459 (10)ref|XP_006355348.1|82.4PREDICTED: uncharacterized protein LOC102586632 [Solanum tuberosum]608007459 (10)ref|XP_009626044.1|4e-50PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis]
JMFN006E11Sequence640002109 (20)ref|XP_009592880.1|4e-85PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti
JMFN031K18Sequence619002109 (20)ref|XP_010277891.1|2e-93PREDICTED: cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic [Nelumb
JMFN032L22Sequence634002109 (20)ref|XP_010060487.1|3e-98PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc
JMFS072A08Sequence627007459 (10)ref|XP_006355348.1|188PREDICTED: uncharacterized protein LOC102586632 [Solanum tuberosum]
JMSF003B20Sequence257002109 (20)ref|XP_009592880.1|9e-40PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti770007459 (10)ref|XP_009626044.1|1e-107PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis]
JMSF008N18Sequence351002109 (20)ref|XP_007043436.1|3e-18Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet763002109 (20)ref|XP_009592880.1|3e-98PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti
JMSF024F17Sequence696002109 (20)ref|XP_010060487.1|6e-106PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc769002109 (20)ref|XP_009592880.1|6e-97PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti
JMSF040E18Sequence678007459 (10)ref|XP_006355348.1|115PREDICTED: uncharacterized protein LOC102586632 [Solanum tuberosum]825007459 (10)ref|XP_009626044.1|4e-113PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis]
JMSF040H13Sequence647002109 (20)ref|XP_007043436.1|7e-94Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet868002109 (20)ref|XP_010060487.1|5e-105PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc
JMSF041H13Sequence741002109 (20)ref|XP_010060487.1|5e-112PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc669002109 (20)ref|XP_009592880.1|1e-84PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti
JMSF045M16Sequence695002109 (20)ref|XP_010060487.1|6e-105PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc520002109 (20)ref|XP_011079046.1|2e-38PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic-like [S

Contig 2109 BLAST Hits against nr-aa DB Show

Contig 7459 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig002109============================================1107         ============================================Contig007459============================================1796
 692                               <----------------------JMSF003B20                                                                                                  <------------------------------------------rJMSF003B20  
               -------------------------------------------------------->JMFN032L22-                                   
              ------------------------------------------------------->JMFN031K18-                                     
                                     --------------------------------------------------------->JMFN006E11-            
                                                                                                                                           ---------------------------------->JMFS072A08-  
                  <------------------------------------------------------------------------------rJMSF040H13**
           ------------------------------------------------------------------>JMSF041H13**
           -------------------------------------------------------------->JMSF024F17**
                                                                               <------------------rJMFF032N22**
                                    <-------------------------------------------------------------rJMFF027F24**
           -------------------------------------------------------------->JMSF045M16**
                             <--------------------------------------------------------------------rJMFF022D22**
            ----------------------------------------------->JMFF027F24**
                                    <----------------------------------------------------------rJMSF041H13**
             ---------------------------------------------->JMFF022D22**
           --------------------------------------------------------->JMSF040H13**
     ------------------------------->JMSF008N18**
                                                          <----------------------------------------------rJMSF045M16**
                          <-------------------------------------------------------------------rJMSF024F17**
           ----------------------------------------------->JMFF032N22**
                          <--------------------------------------------------------------------rJMSF008N18**
                                                                                                                                                                  <--------------------------------------------rJMSF040E18**
                                                                                                                      ---------------------------------->JMFF042E08**
                                                                                                                                                                        <----------------------------------------rJMFF022M23**
                                                                                                                                                                                        <---------------------------------rJMFF042E08**
                                                                                                                                                                         <---------------------------------------rJMFF003F22**
                                                                                                                                     ------------------------------>JMFF003F22**
                                                                                                                           ------------>JMFF022M23**
                                                                                                                          ------------------------------------->JMSF040E18**