| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022D22 | Sequence | 520 | 002109 (20) | ref|XP_011048475.1| | 1e-62 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Pop | 760 | 002109 (20) | ref|XP_011079046.1| | 8e-88 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic-like [S |
| JMFF027F24 | Sequence | 528 | 002109 (20) | ref|XP_007043436.1| | 1e-66 | Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet | 682 | 002109 (20) | ref|XP_009592880.1| | 2e-88 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti |
| JMFF032N22 | Sequence | 533 | 002109 (20) | ref|XP_007043436.1| | 2e-65 | Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet | 209 | 002109 (20) | |||
| JMFN006E11 | Sequence | 640 | 002109 (20) | ref|XP_009592880.1| | 4e-85 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti | |||||
| JMFN031K18 | Sequence | 619 | 002109 (20) | ref|XP_010277891.1| | 2e-93 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic [Nelumb | |||||
| JMFN032L22 | Sequence | 634 | 002109 (20) | ref|XP_010060487.1| | 3e-98 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc | |||||
| JMSF003B20 | Sequence | 257 | 002109 (20) | ref|XP_009592880.1| | 9e-40 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti | 770 | 007459 (10) | ref|XP_009626044.1| | 1e-107 | PREDICTED: oxidation resistance protein 1 [Nicotiana tomentosiformis] |
| JMSF008N18 | Sequence | 351 | 002109 (20) | ref|XP_007043436.1| | 3e-18 | Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet | 763 | 002109 (20) | ref|XP_009592880.1| | 3e-98 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti |
| JMSF024F17 | Sequence | 696 | 002109 (20) | ref|XP_010060487.1| | 6e-106 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc | 769 | 002109 (20) | ref|XP_009592880.1| | 6e-97 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti |
| JMSF040H13 | Sequence | 647 | 002109 (20) | ref|XP_007043436.1| | 7e-94 | Photosynthetic electron transfer C [Theobroma cacao] gb|EOX99267.1| Photosynthet | 868 | 002109 (20) | ref|XP_010060487.1| | 5e-105 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc |
| JMSF041H13 | Sequence | 741 | 002109 (20) | ref|XP_010060487.1| | 5e-112 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc | 669 | 002109 (20) | ref|XP_009592880.1| | 1e-84 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic [Nicoti |
| JMSF045M16 | Sequence | 695 | 002109 (20) | ref|XP_010060487.1| | 6e-105 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like [Euc | 520 | 002109 (20) | ref|XP_011079046.1| | 2e-38 | PREDICTED: cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic-like [S |
This contig is upended
. : . : . : . : . : . :
rJMSF045M16- ATATGCNTGCACTGTTCATNGAACAGG
____________________________________________________________
consensus ATATGCNTGCACTGTTCATNGAACAGG
. : . : . : . : . : . :
rJMFF032N22- TTT
rJMSF045M16- CAAAAACAGAAAGCNAAAGCGGGCCAAGCAAGAGAACAGAATGAAATTTCTATGACATTT
rJMFF027F24- TTT
rJMFF022D22- TTT
____________________________________________________________
consensus CAAAAACAGAAAGCNAAAGCGGGCCAAGCAAGAGAACAGAATGAAATTTCTATGACATTT
. : . : . : . : . : . :
rJMFF032N22- GATTGATGATATGATGTTCCAGGC-TACATCCATCACTCAGTGATATGATGATCAANCCA
rJMSF045M16- GNTTGATGATATGATGTTCCAGGCGTACNTCCATCNCTCNNTGAGATGATGATNAAACCA
rJMFF027F24- GATTGATGATATGATGTTCCAGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
JMFN006E11+ AGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
rJMFF022D22- GATTGATGATATGATGTTCCAGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
rJMSF024F17- TGATATGATGATCAAACCA
rJMSF008N18- TCCATCACTCAGTGATATGATGATCAAACCA
rJMSF041H13- CAGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
rJMSF040H13- TGATGTTCCAGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
____________________________________________________________
consensus GATTGATGATATGATGTTCCAGGC-TACATCCATCACTCAGTGATATGATGATCAAACCA
. : . : . : . : . : . :
rJMFF032N22- TTANGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMSF045M16- TTAAGTGGGGTGTTCCTGCANTCCANNANCTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMFF027F24- TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
JMFN006E11+ TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMFF022D22- TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMSF024F17- TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMSF008N18- TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
rJMSF041H13- TTAAGTGGGGTGTTCCTGCAATCCAATANCTTANCTATACATTTTTTTGTTTCTTGATGA
rJMSF040H13- TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
____________________________________________________________
consensus TTAAGTGGGGTGTTCCTGCAATCCAATAACTTAACTATAC-TTTTTTTGTTTCTTGATGA
. : . : . : . : . : . :
rJMFF032N22- TCAATTTTCNATACTCATATACTACAAATANTANAAGGAGCAACTTGCAGGAGCTCGGTT
rJMSF045M16- TCAATTTNCGAGACTCATATACTACNAATAGNACANGGAGCAACTTGCAGGAGCTCGGTT
rJMFF027F24- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
JMFN006E11+ TCAATTTTCGATACTCATATACTA-AAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
rJMFF022D22- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
rJMSF024F17- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
rJMSF008N18- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
rJMSF041H13- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
rJMSF040H13- TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
____________________________________________________________
consensus TCAATTTTCGATACTCATATACTACAAATAGTACAAGGAGCAACTTGCAGGAGCTCGGTT
. : . : . : . : . : . :
rJMFF032N22- TCCTTCAAGCNCNANGTGAAATACC
rJMSF045M16- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCNATGCCC
rJMFF027F24- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
JMFN006E11+ TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
rJMFF022D22- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
rJMSF024F17- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
rJMSF008N18- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
rJMSF041H13- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
rJMSF040H13- TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
JMSF041H13+ CATTCGAAAAAGATGTCTATGCCC
____________________________________________________________
consensus TCCTTCAAGCGCGAGGTGAAATACCCGAGGGTAATTCATTCGAAAAAGATGTCTATGCCC
. : . : . : . : . : . :
rJMSF045M16- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMFF027F24- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
JMFN006E11+ ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMFF022D22- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMSF024F17- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMSF008N18- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMSF041H13- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
rJMSF040H13- ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
JMFN032L22+ CCCATGGAACGAACACTACCTTAT
JMFN031K18+ T
JMSF024F17+ TGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
JMSF045M16+ GAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
JMSF041H13+ ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
____________________________________________________________
consensus ACCATGGGTTCTCGCCAGTTCTGAAATCAGTCTCGACCCATGGAACGAACACTACCTTAT
. : . : . : . : . : . :
rJMSF045M16- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMFF027F24- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMFN006E11+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMFF022D22- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMSF024F17- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMSF008N18- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMSF041H13- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
rJMSF040H13- CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMFN032L22+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMFN031K18+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMSF024F17+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMSF045M16+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMSF040H13+ GTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
JMSF041H13+ CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
____________________________________________________________
consensus CATCATCAATGTCGGCATGAGCCAATGCCAAGGACAAAGGAGCTGGTCCTCGAACGACTC
. : . : . : . : . : . :
rJMSF045M16- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMFF027F24- TTCCTTGGTTGTTGTACTGTGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMFN006E11+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMFF022D22- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMSF024F17- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMSF008N18- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMSF041H13- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
rJMSF040H13- TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMFN032L22+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMFN031K18+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMSF024F17+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMSF045M16+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMFF032N22+ GT
JMFF027F24+ GGCTGCGT
JMSF040H13+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
JMFF022D22+ GGCTGCGT
JMSF041H13+ TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
____________________________________________________________
consensus TTCCTTGGTTGTTGTACTGGGATCCATGGCAAGGACAGATGAATTTGTTCTCGGCTGCGT
. : . : . : . : . : . :
rJMSF045M16- TCCATGGCACCACG
rJMFF027F24- TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFN006E11+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
rJMFF022D22- TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
rJMSF024F17- TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
rJMSF008N18- TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
rJMSF041H13- TCCATGGCACCACGCAACCAANGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAANTT
rJMSF040H13- TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFN032L22+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFN031K18+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMSF024F17+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMSF045M16+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFF032N22+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFF027F24+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMSF040H13+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMFF022D22+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMSF003B20- GCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
JMSF041H13+ TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
____________________________________________________________
consensus TCCATGGCACCACGCAACCAAGGTGGGTGCAAACAGCGTTGATCCCGTAGGTTGCAAGTT
. : . : . : . : . : . :
rJMFF027F24- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFN006E11+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
rJMFF022D22- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
rJMSF024F17- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
rJMSF008N18- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
rJMSF041H13- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
rJMSF040H13- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFN032L22+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFN031K18+ GCCCGTCATTCTTGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMSF024F17+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMSF045M16+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFF032N22+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFF027F24+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMSF040H13+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMFF022D22+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMSF003B20- GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
JMSF041H13+ GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
____________________________________________________________
consensus GCCCGTCATTCTCGACAACAAGATAGGTGGGGTCTCCCTTCAACCCTTGGGTGAGGGTAC
. : . : . : . : . : . :
rJMFF027F24- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMFN006E11+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
rJMFF022D22- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
rJMSF024F17- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
rJMSF008N18- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
rJMSF041H13- GGTTCCCAGGTGCATGAGTCTTTANCCACTCANAAGCAAGGACATCATTTCCTAGGGCAT
rJMSF040H13- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMFN032L22+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMFN031K18+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMSF024F17+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMSF045M16+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMFF032N22+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCACTTCCTAGGGCAT
JMFF027F24+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMSF040H13+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMFF022D22+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMSF003B20- GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
JMSF041H13+ GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
____________________________________________________________
consensus GGTTCCCAGGTGCATGAGTCTTTAGCCACTCAGAAGCAAGGACATCATTTCCTAGGGCAT
. : . : . : . : . : . :
rJMFF027F24- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFN006E11+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
rJMFF022D22- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
rJMSF024F17- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
rJMSF008N18- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
rJMSF041H13- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCNAGGAGGTACAAAGAANGCTGCAT
rJMSF040H13- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFN032L22+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFN031K18+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMSF024F17+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMSF045M16+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFF032N22+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFF027F24+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMSF040H13+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMFF022D22+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMSF003B20- CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
JMSF041H13+ CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
____________________________________________________________
consensus CCTTAGCAACGGTACCACCACTTCCACCTCCCGACCCAGGAGGTACAAAGAAGGCTGCAT
. : . : . : . : . : . :
rJMFF027F24- AAGGTACCAACATGGCAGAA
JMFN006E11+ AAG
rJMFF022D22- AAGGTGCCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
rJMSF024F17- AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
rJMSF008N18- AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
rJMSF041H13- ANGGTACCAACATGG
rJMSF040H13- AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMFN032L22+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMFN031K18+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMSF024F17+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMSF045M16+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMFF032N22+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMFF027F24+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMSF040H13+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMFF022D22+ AAGGTGCCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMSF003B20- AAGGTACCAACATGGCAGAAGAGGG
JMSF041H13+ AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
JMSF008N18+ ACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
____________________________________________________________
consensus AAGGTACCAACATGGCAGAAGAGGGGAGAGAAAGGGCACCCAAGAGAAGCAAGTTCATGA
. : . : . : . : . : . :
rJMFF022D22- GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCG
rJMSF024F17- GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
rJMSF008N18- GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
rJMSF040H13- GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMFN032L22+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMFN031K18+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMSF024F17+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMSF045M16+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMFF032N22+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMFF027F24+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMSF040H13+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMFF022D22+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
JMSF041H13+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATANTGGTGGCCATGCACG
JMSF008N18+ GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
____________________________________________________________
consensus GCTGCCTCTTACCCATATCCGGCACCCGATCGTCGGCCGGAATACTGGTGGCCATGCACG
. : . : . : . : . : . :
rJMSF024F17- TGANCCTCA
rJMSF008N18- TGACCCTCAACCC
rJMSF040H13- TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMFN032L22+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMFN031K18+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCAACATCAACG
JMSF024F17+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMSF045M16+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMFF032N22+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMFF027F24+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMSF040H13+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMFF022D22+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMSF041H13+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
JMSF008N18+ TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
____________________________________________________________
consensus TGACCCTCAACCCCTTCTTCCTCCCGCCGGCGCCGCTCCTCACGGATTTCACCATCAACG
. : . : . : . : . : . :
rJMSF040H13- CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCAT
JMFN032L22+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMFN031K18+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMSF024F17+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMSF045M16+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGTAGTGACGG
JMFF032N22+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMFF027F24+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMSF040H13+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMFF022D22+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMSF041H13+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
JMSF008N18+ CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
____________________________________________________________
consensus CTTGGGAGCCGCCGGAGCACATGCCATTCCTGCTCGAGCATAGCTGAGAAGGAGTGACGG
. : . : . : . : . : . :
JMFN032L22+ GTGGGAGTGT
JMFN031K18+ GTGAGAGTGTGGAAGAAG
JMSF024F17+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTG
JMSF045M16+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTGT
JMFF032N22+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGAT
JMFF027F24+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGTTTTT
JMSF040H13+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTGT
JMFF022D22+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGC
JMSF041H13+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTGT
JMSF008N18+ GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTGTAGAA
____________________________________________________________
consensus GTGAGAGTGTGGAAGAAGCCATGAATTTTTGCGCGATTTTGTTTTGCTGATAGTGTAGAA
. : . : . : . : . : . :
JMSF008N18+ GAAAAAATGGAGGGAGGGTAGGAGAGGAGATTTGATGACCAAGGATGAAATGATTGGACC
____________________________________________________________
consensus GAAAAAATGGAGGGAGGGTAGGAGAGGAGATTTGATGACCAAGGATGAAATGATTGGACC