List of clones in pair P001696.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018L01Sequence485000459 (13)ref|XP_009794563.1|3e-28PREDICTED: TMV resistance protein N-like [Nicotiana sylvestris]735013948 (4)ref|XP_010245461.1|4e-35PREDICTED: topless-related protein 2-like isoform X2 [Nelumbo nucifera]
JMSF032I24Sequence688000459 (13)ref|XP_006342676.1|3e-50PREDICTED: TMV resistance protein N-like [Solanum tuberosum]709013948 (4)ref|XP_010245461.1|3e-31PREDICTED: topless-related protein 2-like isoform X2 [Nelumbo nucifera]
JMSF035A03Sequence261000459 (13)719013948 (4)ref|XP_010245461.1|4e-33PREDICTED: topless-related protein 2-like isoform X2 [Nelumbo nucifera]

Contig 459 BLAST Hits against nr-aa DB Show

Contig 13948 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000459============================================ 927         ============================================Contig013948============================================ 735
  95         ------------------------------------------------------------------------>JMSF032I24                        <----------------------------------------------------------------------------------------------rJMSF032I24  
 180                    ------------------------------->JMSF018L01                                                    <---------------------------------------------------------------------------------------------------rJMSF018L01  
 200                    ------->JMSF035A03                                                                              <----------------------------------------------------------------------------------------------rJMSF035A03  
                                                   --------------------------------->JMSF004C18#                      
                                                      ------------------------------->JMFS075D09-                     
                        ------------------------>JMSF005C24-                                                          
            ------------------------------------------------------------------>JMSF024L20*                            
             ------------------------------------------------------------------------>JMSF046H06*                     
            ------------------------------------------->JMSF011N01*                                                   
                       <---------------------------------------------------------------------------------rJMSF001J13# 
     --------------------------------------------------------------->JMFS091B01-                                      
             ------------------------------------------------------------------------>JMSF030F23*                     
                        <------------------------------------------------------------------------rJMSF018F17#         
                                                                                                                                                                       <-------------------------------------------rJMSF005A22*