clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF035J01 | Sequence | 560 | 003582 (5) | emb|CDP19325.1| | 5e-66 | unnamed protein product [Coffea canephora] | 698 | 001150 (4) | ref|XP_006345040.1| | 1e-65 | PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum] |
JMFS037G12 | Sequence | 614 | 001150 (4) | ref|XP_006345040.1| | 2e-65 | PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum] | |||||
JMFS074D08 | Sequence | 626 | 003582 (5) | emb|CDP19325.1| | 1e-79 | unnamed protein product [Coffea canephora] | |||||
JMFS078G05 | Sequence | 617 | 003582 (5) | emb|CDP19325.1| | 7e-78 | unnamed protein product [Coffea canephora] | |||||
JMSF010N11 | Sequence | 170 | 003582 (5) | 769 | 001150 (4) | ref|XP_009623301.1| | 1e-90 | PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis] | |||
JMSF013H05 | Sequence | 537 | 003582 (5) | emb|CDP19325.1| | 2e-63 | unnamed protein product [Coffea canephora] | 774 | 001150 (4) | ref|XP_009796585.1| | 4e-84 | PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003582============================================ 717 ============================================Contig001150============================================ 820 53 ----------------------->JMSF010N11 <---------------------------------------------------------------------------------------------rJMSF010N11 74 -------------------------------------------------------------------------->JMSF013H05 <---------------------------------------------------------------------------------------------rJMSF013H05 77 ----------------------------------------------------------------------------->JMFF035J01 <------------------------------------------------------------------------------------rJMFF035J01 ------------------------------------------------------------------------------------->JMFS078G05- -------------------------------------------------------------------------------------->JMFS074D08- ------------------------------------------------------------------------>JMFS037G12-