List of clones in pair P001602.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035J01Sequence560003582 (5)emb|CDP19325.1|5e-66unnamed protein product [Coffea canephora]698001150 (4)ref|XP_006345040.1|1e-65PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
JMFS037G12Sequence614001150 (4)ref|XP_006345040.1|2e-65PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
JMFS074D08Sequence626003582 (5)emb|CDP19325.1|1e-79unnamed protein product [Coffea canephora]
JMFS078G05Sequence617003582 (5)emb|CDP19325.1|7e-78unnamed protein product [Coffea canephora]
JMSF010N11Sequence170003582 (5)769001150 (4)ref|XP_009623301.1|1e-90PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis]
JMSF013H05Sequence537003582 (5)emb|CDP19325.1|2e-63unnamed protein product [Coffea canephora]774001150 (4)ref|XP_009796585.1|4e-84PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]

Contig 3582 BLAST Hits against nr-aa DB Show

Contig 1150 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003582============================================ 717         ============================================Contig001150============================================ 820
  53 ----------------------->JMSF010N11                                                                               <---------------------------------------------------------------------------------------------rJMSF010N11  
  74          -------------------------------------------------------------------------->JMSF013H05                        <---------------------------------------------------------------------------------------------rJMSF013H05  
  77            ----------------------------------------------------------------------------->JMFF035J01                             <------------------------------------------------------------------------------------rJMFF035J01  
                   ------------------------------------------------------------------------------------->JMFS078G05-  
                   -------------------------------------------------------------------------------------->JMFS074D08-  
                                                                                                                                           ------------------------------------------------------------------------>JMFS037G12-