Clone JMFS074D08 [sequences]

contigF:003582 contigR:

name	5'-sequence						3'-sequence						length	description
name	rank	score	Evalue	region1	region2	frame	rank	score	Evalue	region1	region2	frame	length	description
emb\|CDP19325.1\|	1	268	1e-79	6-626	8-212	+3							1120	unnamed protein product [Coffea canephora]
ref\|XP_011071821.1\|	2	263	5e-78	6-626	12-221	+3							1133	PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
ref\|XP_009623301.1\|	3	263	1e-77	3-623	7-211	+3							1120	PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana tomentosiformis]
ref\|XP_009796585.1\|	4	259	2e-76	3-623	7-211	+3							1120	PREDICTED: RNA-dependent RNA polymerase 2 [Nicotiana sylvestris]
gb\|AAU21243.1\|	5	258	5e-76	3-623	7-211	+3							1120	putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
ref\|XP_006345040.1\|	6	251	9e-74	6-623	8-210	+3							1119	PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
ref\|XP_004236120.1\|	7	244	3e-71	6-623	8-210	+3							1119	PREDICTED: RNA-dependent RNA polymerase 2 [Solanum lycopersicum]
gb\|AHL27587.1\|	8	240	6e-70	6-626	12-221	+3							972	RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
ref\|XP_007036161.1\|	9	231	2e-66	12-626	15-217	+3							1149	RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao] ref\|XP_007036162.1\| RNA-dependent RNA polymerase 2 isoform 1
ref\|XP_002280099.1\|	10	231	3e-66	12-623	8-209	+3							1127	PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera] emb\|CBI15062.3\| unnamed protein product [Vitis vinifera]
ref\|XP_007211312.1\|	11	231	3e-66	12-626	8-210	+3							1118	hypothetical protein PRUPE_ppa000513mg [Prunus persica] gb\|EMJ12511.1\| hypothetical protein PRUPE_ppa000513mg [Prunus pe
gb\|ADU04145.1\|	12	229	1e-65	12-626	10-212	+3							1147	hypothetical protein [Gossypium hirsutum]
gb\|KJB53208.1\|	13	227	7e-65	12-626	10-212	+3							1147	hypothetical protein B456_008G296900 [Gossypium raimondii]
gb\|KHG14638.1\|	14	226	2e-64	12-626	10-212	+3							1147	RNA-dependent RNA polymerase 2 -like protein [Gossypium arboreum]
gb\|ADU04140.1\|	15	224	8e-64	12-626	10-212	+3							1147	hypothetical protein [Gossypium hirsutum]
ref\|XP_004298927.1\|	16	223	2e-63	12-626	11-213	+3							1136	PREDICTED: RNA-dependent RNA polymerase 2 [Fragaria vesca subsp. vesca]
ref\|XP_010678731.1\|	17	220	2e-62	9-626	11-213	+3							1116	PREDICTED: RNA-dependent RNA polymerase 2 [Beta vulgaris subsp. vulgaris]
gb\|KDP31126.1\|	18	218	1e-61	12-626	12-214	+3							1122	hypothetical protein JCGZ_11502 [Jatropha curcas]
gb\|EYU42543.1\|	19	218	1e-61	6-626	7-216	+3							1135	hypothetical protein MIMGU_mgv1a000463mg [Erythranthe guttata]
ref\|XP_008453109.1\|	20	217	3e-61	9-626	7-210	+3							1117	PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
gb\|KEH31853.1\|	21	213	1e-59	6-626	8-213	+3							1123	RNA-dependent RNA polymerase family protein [Medicago truncatula]
gb\|AES91141.2\|	22	213	2e-59	6-626	8-213	+3							1277	RNA-dependent RNA polymerase family protein [Medicago truncatula]
ref\|XP_003608944.1\|	23	212	2e-59	6-626	8-213	+3							1308	Rna-dependent RNA polymerase [Medicago truncatula]
ref\|XP_008239735.1\|	24	209	2e-58	12-626	8-192	+3							1100	PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 2 [Prunus mume]
ref\|XP_010107450.1\|	25	209	2e-58	12-626	9-208	+3							1115	RNA-dependent RNA polymerase 2 [Morus notabilis] gb\|EXC16034.1\| RNA-dependent RNA polymerase 2 [Morus notabilis]
gb\|KDO69723.1\|	26	208	4e-58	3-626	2-225	+3							1131	hypothetical protein CISIN_1g001183mg [Citrus sinensis]
ref\|XP_006476748.1\|	27	208	5e-58	3-626	2-225	+3							1131	PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
ref\|XP_010271987.1\|	28	207	1e-57	9-623	6-208	+3							1115	PREDICTED: RNA-dependent RNA polymerase 2 [Nelumbo nucifera] ref\|XP_010271988.1\| PREDICTED: RNA-dependent RNA polymerase
ref\|XP_004508850.1\|	29	207	1e-57	6-626	8-212	+3							1122	PREDICTED: RNA-dependent RNA polymerase 2-like [Cicer arietinum]
ref\|NP_001267608.1\|	30	199	5e-55	9-626	7-210	+3							1117	RNA-dependent RNA polymerase 2-like [Cucumis sativus] gb\|ADU77018.1\| RNA-dependent RNA polymerase 2 [Cucumis sativus] gb
gb\|EPS65825.1\|	31	198	1e-54	78-626	1-186	+3							1094	hypothetical protein M569_08951, partial [Genlisea aurea]
ref\|XP_006579560.1\|	32	197	2e-54	3-626	9-212	+3							1121	PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Glycine max]
ref\|XP_002321582.1\|	33	197	2e-54	12-626	9-212	+3							1110	hypothetical protein POPTR_0015s08500g [Populus trichocarpa] gb\|EEF05709.1\| hypothetical protein POPTR_0015s08500g [Popu
ref\|XP_011028594.1\|	34	197	3e-54	12-626	9-212	+3							1105	PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
ref\|XP_006396953.1\|	35	195	2e-53	9-626	8-213	+3							1124	hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum] gb\|ESQ38406.1\| hypothetical protein EUTSA_v10028370mg [Eutr
ref\|XP_010546021.1\|	36	194	5e-53	12-626	9-213	+3							1120	PREDICTED: RNA-dependent RNA polymerase 2 [Tarenaya hassleriana]
ref\|XP_002872551.1\|	37	191	3e-52	9-626	10-216	+3							1134	RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata] gb\|EFH48810.1\| RNA-dependent RNA polymerase 2 [Arabido
gb\|KFK44224.1\|	38	191	4e-52	12-626	10-214	+3							1134	rna-dependent rna polymerase 2 [Arabis alpina]
emb\|CDY67962.1\|	39	187	8e-51	9-626	8-213	+3							1125	BnaCnng57100D [Brassica napus]
ref\|XP_003550744.1\|	40	187	1e-50	3-626	8-211	+3							1120	PREDICTED: RNA-dependent RNA polymerase 2-like [Glycine max]
ref\|XP_010422054.1\|	41	185	7e-50	12-626	13-218	+3							1136	PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Camelina sativa] ref\|XP_010422055.1\| PREDICTED: RNA-dependent RNA
emb\|CDX86814.1\|	42	184	1e-49	9-626	8-213	+3							1129	BnaA09g22040D [Brassica napus]
ref\|XP_009108193.1\|	43	182	4e-49	9-626	8-213	+3							1122	PREDICTED: RNA-dependent RNA polymerase 2 [Brassica rapa]
ref\|XP_010455516.1\|	44	182	6e-49	6-626	8-215	+3							1133	PREDICTED: RNA-dependent RNA polymerase 2-like [Camelina sativa]
ref\|NP_192851.1\|	45	181	1e-48	9-626	10-215	+3							1133	RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] sp\|O82504.1\|RDR2_ARATH RecName: Full=RNA-dependent RNA polymerase
ref\|XP_010435459.1\|	46	181	1e-48	12-626	13-218	+3							1136	PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Camelina sativa]
ref\|XP_008780950.1\|	47	181	2e-48	3-626	4-208	+3							1117	PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix dactylifera]
ref\|XP_010435450.1\|	48	180	3e-48	12-626	13-218	+3							1136	PREDICTED: RNA-dependent RNA polymerase 2-like isoform X1 [Camelina sativa]
ref\|XP_006836643.1\|	49	180	3e-48	9-626	4-204	+3							1107	hypothetical protein AMTR_s00088p00026960 [Amborella trichopoda] gb\|ERM99496.1\| hypothetical protein AMTR_s00088p0002696
ref\|XP_006286933.1\|	50	180	4e-48	15-626	43-247	+3							1165	hypothetical protein CARUB_v10000076mg, partial [Capsella rubella] gb\|EOA19831.1\| hypothetical protein CARUB_v10000076mg
ref\|XP_010913557.1\|	51	179	5e-48	9-626	6-208	+3							1117	PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis guineensis]
ref\|XP_010037577.1\|	52	178	2e-47	12-626	10-222	+3							1130	PREDICTED: RNA-dependent RNA polymerase 2 [Eucalyptus grandis] gb\|KCW49305.1\| hypothetical protein EUGRSUZ_K02861 [Eucal
ref\|XP_009381640.1\|	53	173	1e-45	9-626	6-208	+3							1106	PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata subsp. malaccensis]
ref\|XP_007155403.1\|	54	171	8e-45	3-623	8-210	+3							1119	hypothetical protein PHAVU_003G198500g [Phaseolus vulgaris] gb\|ESW27397.1\| hypothetical protein PHAVU_003G198500g [Phase
gb\|AJA90762.1\|	55	148	4e-37	9-623	4-206	+3							1117	RNA-dependent RNA polymerase 2 [Cycas revoluta]
gb\|KHN48606.1\|	56	144	2e-35	132-626	61-221	+3							1130	RNA-dependent RNA polymerase 2 [Glycine soja]
ref\|XP_003579930.1\|	57	143	3e-35	6-623	11-214	+3							1140	PREDICTED: probable RNA-dependent RNA polymerase 2 [Brachypodium distachyon]
ref\|XP_003560510.1\|	58	140	5e-34	6-623	11-211	+3							1138	PREDICTED: probable RNA-dependent RNA polymerase 2 [Brachypodium distachyon]
ref\|XP_008668575.1\|	59	138	1e-33	6-623	11-214	+3							1091	PREDICTED: RNA-dependent DNA polymerase isoform X1 [Zea mays]
ref\|NP_001183867.1\|	60	138	1e-33	6-623	11-214	+3							1127	RNA-dependent DNA polymerase [Zea mays] gb\|ABD72708.1\| RNA-dependent RNA polymerase [Zea mays] gb\|AEZ01781.1\| RNA-depend
ref\|XP_002446635.1\|	61	134	3e-32	15-623	14-214	+3							1128	hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor] gb\|EES10963.1\| hypothetical protein SORBIDRAFT_06g019330 [So
ref\|XP_004978058.1\|	62	134	5e-32	15-623	16-215	+3							1130	PREDICTED: probable RNA-dependent RNA polymerase 2-like [Setaria italica]
gb\|AJA90786.1\|	63	124	2e-28	9-623	4-203	+3							1114	RNA-dependent RNA polymerase 2 [Pinus canariensis]
gb\|AJA90778.1\|	64	120	2e-27	6-623	3-208	+3							1114	RNA-dependent RNA polymerase 2 [Ginkgo biloba]
dbj\|BAJ85295.1\|	65	119	4e-27	6-623	11-214	+3							1127	predicted protein [Hordeum vulgare subsp. vulgare]
sp\|Q7XM31.1\|RDR2_ORYSJ	67	117	3e-26	12-623	11-212	+3							1136	RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2 [Oryza sativa Japonica Group] emb\|CAE04828.1\| OSJNB
gb\|EAY94464.1\|	68	117	3e-26	12-623	11-212	+3							1136	hypothetical protein OsI_16234 [Oryza sativa Indica Group]
gb\|EAZ31020.1\|	66	115	7e-27	12-623	11-212	+3							352	hypothetical protein OsJ_15103 [Oryza sativa Japonica Group]
tpg\|DAA37404.1\|	69	103	1e-23	6-536	11-185	+3							207	TPA: mediator of paramutation1 [Zea mays]
gb\|KHN18473.1\|	71	91.3	2e-17	327-626	1-99	+3							1008	RNA-dependent RNA polymerase 2 [Glycine soja]
gb\|EMS60432.1\|	70	90.1	2e-18	6-539	11-186	+3							225	putative RNA-dependent RNA polymerase 2 [Triticum urartu]
gb\|EMT07612.1\|	72	86.3	9e-16	6-623	11-237	+3							1160	hypothetical protein F775_11614 [Aegilops tauschii]
gb\|AJA90770.1\|	73	85.5	2e-15	3-623	1-202	+3							1111	RNA-dependent RNA polymerase 2 [Ephedra trifurca]
gb\|EMT21060.1\|	74	82.8	2e-14	6-539	11-186	+3							1246	hypothetical protein F775_12206 [Aegilops tauschii]
ref\|XP_006653498.1\|	75	82.4	2e-14	12-623	13-161	+3							1055	PREDICTED: probable RNA-dependent RNA polymerase 2-like [Oryza brachyantha]
ref\|XP_002511431.1\|	76	74.3	7e-12	447-626	1-59	+3							983	RNA-dependent RNA polymerase, putative [Ricinus communis] gb\|EEF52033.1\| RNA-dependent RNA polymerase, putative [Ricinus
ref\|XP_002991339.1\|	77	65.9	4e-09	21-491	5-165	+3							1134	hypothetical protein SELMODRAFT_448382 [Selaginella moellendorffii] gb\|EFJ07637.1\| hypothetical protein SELMODRAFT_44838
ref\|XP_002281315.1\|	78	57.0	3e-06	12-560	4-181	+3							1109	PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera] ref\|XP_010650995.1\| PREDICTED: probable RNA-dependen
ref\|XP_010527810.1\|	79	52.4	9e-05	12-590	4-192	+3							1109	PREDICTED: RNA-dependent RNA polymerase 1 [Tarenaya hassleriana]
ref\|XP_006579561.1\|	80	51.2	3e-04	531-626	1-32	+3							941	PREDICTED: RNA-dependent RNA polymerase 2-like isoform X2 [Glycine max]
ref\|XP_006849794.1\|	81	50.8	3e-04	12-605	77-267	+3							1210	hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda] gb\|ERN11375.1\| hypothetical protein AMTR_s00176p0003953
emb\|CDY41107.1\|	82	50.8	4e-04	12-560	4-183	+3							1093	BnaC05g10980D [Brassica napus]
emb\|CBI26821.3\|	84	49.3	0.001										943	unnamed protein product [Vitis vinifera]
ref\|XP_001774551.1\|	83	48.9	7e-04	15-239	60-134	+3							235	predicted protein [Physcomitrella patens] gb\|EDQ60619.1\| predicted protein, partial [Physcomitrella patens]