| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF010L14 | Sequence | 764 | 001242 (6) | gb|KHG24434.1| | 3e-84 | WD40 repeat-containing SMU1 [Gossypium arboreum] | |||||
| JMFF028N17 | Sequence | 567 | 010733 (4) | emb|CDP18866.1| | 4e-84 | unnamed protein product [Coffea canephora] | |||||
| JMFF050J11 | Sequence | 630 | 010733 (4) | emb|CDP18866.1| | 4e-93 | unnamed protein product [Coffea canephora] | 546 | 001242 (6) | ref|NP_001234868.1| | 6e-51 | WD-40 repeat protein [Solanum lycopersicum] gb|AAK52092.1| WD-40 repeat protein |
| JMSF020I11 | Sequence | 707 | 001242 (6) | ref|XP_010255536.1| | 3e-163 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera] | 716 | 001242 (6) | ref|XP_006356514.1| | 4e-88 | PREDICTED: WD40 repeat-containing protein SMU1-like [Solanum tuberosum] |
| JMSF026H21 | Sequence | 654 | 010733 (4) | emb|CDP18866.1| | 1e-102 | unnamed protein product [Coffea canephora] | 758 | 001242 (6) | ref|XP_010255536.1| | 2e-117 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera] |
| JMSF030K19 | Sequence | 645 | 010733 (4) | emb|CDP18866.1| | 3e-117 | unnamed protein product [Coffea canephora] | 721 | 001242 (6) | ref|XP_010255536.1| | 2e-112 | PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig010733============================================ 715 ============================================Contig001242============================================1045 7 --------------------------------------------------------------------------------------->JMFF050J11 <---------------------------------------------------rJMFF050J11 61 ------------------------------------------------------------------------------------------>JMSF026H21 <------------------------------------------------------------------------rJMSF026H21 144 ----------------------------------------------------------------------------------------->JMSF030K19 <--------------------------------------------------------------------rJMSF030K19 ------------------------------------------------------------------------------>JMFF028N17- <------------------------------------------------------------------------rJMFF010L14- <-----------------------------------------------------------------rJMSF020I11** ------------------------------------------------------------------->JMSF020I11**