clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFS143B08 | Sequence | 614 | 002271 (5) | emb|CDP09162.1| | 5e-25 | unnamed protein product [Coffea canephora] | |||||
JMFS148A03 | Sequence | 585 | 002271 (5) | emb|CDP09162.1| | 8e-21 | unnamed protein product [Coffea canephora] | |||||
JMSF019F23 | Sequence | 465 | 002271 (5) | emb|CDP09162.1| | 4e-08 | unnamed protein product [Coffea canephora] | 788 | 002891 (3) | ref|XP_009616257.1| | 9e-60 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like isofor |
JMSF026N08 | Sequence | 652 | 002271 (5) | emb|CDP09162.1| | 6e-30 | unnamed protein product [Coffea canephora] | 765 | 002891 (3) | ref|XP_009616257.1| | 2e-56 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like isofor |
JMSF028L07 | Sequence | 672 | 002271 (5) | emb|CDP09162.1| | 8e-33 | unnamed protein product [Coffea canephora] | 799 | 002891 (3) | ref|XP_009616257.1| | 1e-59 | PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like isofor |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002271============================================ 672 ============================================Contig002891============================================ 799 6 -------------------------------------------------------------------------------------------------->JMSF028L07 <---------------------------------------------------------------------------------------------------rJMSF028L07 13 ------------------------------------------------------------------------------------------------>JMSF026N08 <----------------------------------------------------------------------------------------------rJMSF026N08 17 -------------------------------------------------------------------->JMSF019F23 <------------------------------------------------------------------------------------------------rJMSF019F23 -------------------------------------------------------------------------------------->JMFS148A03- ------------------------------------------------------------------------------------------>JMFS143B08-