clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFS010D08 | Sequence | 639 | 003762 (4) | emb|CDP09904.1| | 1e-94 | unnamed protein product [Coffea canephora] | |||||
JMFS044F04 | Sequence | 642 | 003400 (6) | emb|CBI25910.3| | 2e-95 | unnamed protein product [Vitis vinifera] | |||||
JMFS045B02 | Sequence | 564 | 003400 (6) | emb|CBI25910.3| | 1e-92 | unnamed protein product [Vitis vinifera] | |||||
JMSF009E05 | Sequence | 400 | 003762 (4) | emb|CDP09904.1| | 7e-35 | unnamed protein product [Coffea canephora] | 703 | 003400 (6) | ref|XP_003635538.1| | 1e-130 | PREDICTED: elongation factor G-2, chloroplastic-like, partial [Vitis vinifera] |
JMSF033O08 | Sequence | 625 | 003762 (4) | emb|CDP09904.1| | 6e-72 | unnamed protein product [Coffea canephora] | 712 | 003400 (6) | ref|XP_003635538.1| | 3e-131 | PREDICTED: elongation factor G-2, chloroplastic-like, partial [Vitis vinifera] |
JMSF041D05 | Sequence | 818 | 003762 (4) | emb|CDP09904.1| | 3e-120 | unnamed protein product [Coffea canephora] | 734 | 003400 (6) | ref|XP_003635538.1| | 1e-144 | PREDICTED: elongation factor G-2, chloroplastic-like, partial [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003762============================================ 818 ============================================Contig003400============================================ 861 81 --------------------------------------------------------------------------->JMSF033O08 <--------------------------------------------------------------------------------rJMSF033O08 114 --------------------------------------------------------------------------------------------------->JMSF041D05 <-----------------------------------------------------------------------------rJMSF041D05 151 ------------------------------------------------>JMSF009E05 <--------------------------------------------------------------------------------rJMSF009E05 ----------------------------------------------------------------------------->JMFS010D08- <--------------------------------------------------------------------------JMFS044F04- <---------------------------------------------------------------------------rJMSF053M13* ----------------------------------------------------------------->JMFS045B02-