clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF017O14 | Sequence | 493 | 003906 (4) | ref|XP_006350582.1| | 5e-29 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ | 798 | 008444 (4) | ref|XP_011084487.1| | 4e-118 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ |
JMSF008B18 | Sequence | 219 | 003906 (4) | ref|XP_004234179.1| | 2e-08 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isofor | 770 | 008444 (4) | ref|XP_011084487.1| | 8e-122 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ |
JMSF021C02 | Sequence | 676 | 003906 (4) | ref|XP_006350582.1| | 4e-42 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ | 753 | 008444 (4) | ref|XP_006350582.1| | 1e-113 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ |
JMSF050J23 | Sequence | 615 | 003906 (4) | ref|XP_006350582.1| | 2e-36 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ | 709 | 008444 (4) | ref|XP_006350582.1| | 3e-107 | PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like [ |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003906============================================ 676 ============================================Contig008444============================================ 770 2 ------------------------------------------------------------------------------------------>JMSF050J23 <-------------------------------------------------------------------------------------------rJMSF050J23 4 ------------------------------->JMSF008B18 <---------------------------------------------------------------------------------------------------rJMSF008B18 115 ------------------------------------------------------------------------>JMFF017O14 <-----------------------------------------------------------------------------------rJMFF017O14 115 --------------------------------------------------------------------------------------------------->JMSF021C02 <--------------------------------------------------------------------------------rJMSF021C02