clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF018B11 | Sequence | 606 | 002158 (4) | emb|CDP12183.1| | 3e-17 | unnamed protein product [Coffea canephora] | 786 | 006836 (5) | ref|XP_009764747.1| | 2e-47 | PREDICTED: auxin response factor 9-like isoform X1 [Nicotiana sylvestris] |
JMSF011D02 | Sequence | 366 | 002158 (4) | ref|XP_006343828.1| | 6e-08 | PREDICTED: auxin response factor 9-like [Solanum tuberosum] | 727 | 006836 (5) | ref|XP_009764747.1| | 2e-47 | PREDICTED: auxin response factor 9-like isoform X1 [Nicotiana sylvestris] |
JMSF014F22 | Sequence | 229 | 002158 (4) | 829 | 006836 (5) | ref|XP_009764747.1| | 4e-47 | PREDICTED: auxin response factor 9-like isoform X1 [Nicotiana sylvestris] | |||
JMSF044A07 | Sequence | 782 | 002158 (4) | ref|XP_006343828.1| | 5e-52 | PREDICTED: auxin response factor 9-like [Solanum tuberosum] | 693 | 006836 (5) | ref|XP_009764747.1| | 2e-45 | PREDICTED: auxin response factor 9-like isoform X1 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002158============================================ 782 ============================================Contig006836============================================ 947 3 ------------------------------------------------>JMFF018B11 <----------------------------------------------------------------------------------rJMFF018B11 22 ---------------------------->JMSF014F22 <-----------------------------------------------------------------------------------rJMSF014F22 25 --------------------------------------------------------------------------------------------------->JMSF044A07 <------------------------------------------------------------------------rJMSF044A07 134 ---------------------------------->JMSF011D02 <----------------------------------------------------------------------------rJMSF011D02 <--------------------------------------------------------------------------rJMFF016F22#