| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFS099H04 | Sequence | 597 | 002128 (5) | ref|XP_009771507.1| | 8e-117 | PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana sylvestris] | |||||
| JMSF002C20 | Sequence | 314 | 002128 (5) | emb|CDP18816.1| | 4e-24 | unnamed protein product [Coffea canephora] | 789 | 011233 (4) | ref|XP_007010830.1| | 7e-36 | Nuclear matrix protein-related isoform 3 [Theobroma cacao] ref|XP_007010832.1| N |
| JMSF010N19 | Sequence | 320 | 002128 (5) | emb|CDP18816.1| | 3e-23 | unnamed protein product [Coffea canephora] | 720 | 011233 (4) | ref|XP_007010828.1| | 3e-56 | Nuclear matrix protein-related isoform 1 [Theobroma cacao] gb|EOY19638.1| Nuclea |
| JMSF028G03 | Sequence | 685 | 002128 (5) | ref|XP_009771507.1| | 2e-127 | PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana sylvestris] | 728 | 011233 (4) | ref|XP_007010830.1| | 3e-44 | Nuclear matrix protein-related isoform 3 [Theobroma cacao] ref|XP_007010832.1| N |
| JMSF040L08 | Sequence | 682 | 002128 (5) | ref|XP_009771507.1| | 3e-113 | PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana sylvestris] | 859 | 011233 (4) | ref|XP_007010828.1| | 1e-56 | Nuclear matrix protein-related isoform 1 [Theobroma cacao] gb|EOY19638.1| Nuclea |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig002128============================================ 740 ============================================Contig011233============================================ 929 10 ----------------------------------------->JMSF002C20 <------------------------------------------------------------------------------------rJMSF002C20 97 ------------------------------------------------------------------------------------------->JMSF040L08 <------------------------------------------------------------------------------------------rJMSF040L08 153 ------------------------------------------------------------------------------------------->JMSF028G03 <-----------------------------------------------------------------------------rJMSF028G03 206 ------------------------------------------>JMSF010N19 <-----------------------------------------------------------------------------rJMSF010N19 -------------------------------------------------------------------------------->JMFS099H04-