Clone JMSF002C20 [sequences]

contigF:002128 contigR:011233
name5'-sequence3'-sequencelengthdescription
rankscoreEvalueregion1region2framerankscoreEvalueregion1region2frame
ref|XP_009771507.1|31032e-23139-3121-58+1151366e-33371-787474-599-3609PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana sylvestris]
ref|XP_011086264.1|61021e-22127-3122-63+1121365e-33371-787479-604-3614PREDICTED: THO complex subunit 1 [Sesamum indicum]
ref|XP_004230044.1|899.88e-22139-3121-58+1161366e-33371-787474-599-3608PREDICTED: THO complex subunit 1 isoform X3 [Solanum lycopersicum]
ref|XP_007010828.1|3490.12e-18139-3122-59+131441e-35446-787474-591-3602Nuclear matrix protein-related isoform 1 [Theobroma cacao] gb|EOY19638.1| Nuclear matrix protein-related isoform 1 [Theo
ref|XP_006347676.1|799.87e-22139-3121-58+1251313e-31446-787474-591-3609PREDICTED: THO complex subunit 1-like [Solanum tuberosum]
ref|XP_009608815.1|41026e-23139-3121-58+1331283e-30458-787474-587-3605PREDICTED: THO complex subunit 1 isoform X1 [Nicotiana tomentosiformis]
ref|XP_010659079.1|1993.21e-19139-3121-58+191364e-33371-787460-577-3587PREDICTED: THO complex subunit 1-like isoform X2 [Vitis vinifera]
ref|XP_010659074.1|2093.21e-19139-3121-58+1101364e-33371-787460-577-3587PREDICTED: THO complex subunit 1-like isoform X2 [Vitis vinifera]
ref|XP_002264619.2|2293.21e-19139-3121-58+1141365e-33371-787474-591-3601PREDICTED: THO complex subunit 1-like isoform X1 [Vitis vinifera] ref|XP_010659073.1| PREDICTED: THO complex subunit 1-l
ref|XP_010659077.1|2193.21e-19139-3121-58+1171366e-33371-787474-591-3601PREDICTED: THO complex subunit 1-like isoform X1 [Vitis vinifera] ref|XP_010659078.1| PREDICTED: THO complex subunit 1-l
ref|XP_011034701.1|3687.81e-17139-3121-58+141411e-34371-787473-598-3608PREDICTED: THO complex subunit 1-like [Populus euphratica]
emb|CBI35079.3|2392.82e-19100-3121-70+1181366e-33371-787486-603-3613unnamed protein product [Vitis vinifera]
emb|CBI35093.3|2792.04e-19103-3123-70+1191358e-33371-787486-603-3613unnamed protein product [Vitis vinifera]
ref|XP_002299188.1|3787.81e-17139-3121-58+151396e-34371-787473-598-3608hypothetical protein POPTR_0001s06900g [Populus trichocarpa] gb|EEE83993.1| hypothetical protein POPTR_0001s06900g [Popu
ref|XP_006432406.1|1196.31e-20139-3121-58+1321292e-30452-787473-588-3608hypothetical protein CICLE_v10000631mg [Citrus clementina] gb|ESR45646.1| hypothetical protein CICLE_v10000631mg [Citrus
gb|KHG00278.1|3091.36e-19139-3122-59+1211344e-32371-787474-601-3611THO complex subunit 1 [Gossypium arboreum] gb|KHG03477.1| THO complex subunit 1 [Gossypium arboreum] gb|KHG16973.1| THO
gb|KJB75025.1|2991.36e-19139-3122-59+1241338e-32371-787474-601-3611hypothetical protein B456_012G019300 [Gossypium raimondii]
ref|XP_007204592.1|1794.07e-20139-3061-56+1261305e-31446-787469-586-3604hypothetical protein PRUPE_ppa003099mg [Prunus persica] gb|EMJ05791.1| hypothetical protein PRUPE_ppa003099mg [Prunus pe
ref|XP_006465778.1|2492.82e-19139-3121-58+1281307e-31452-787472-587-3607PREDICTED: THO complex subunit 1-like isoform X2 [Citrus sinensis]
ref|XP_006465777.1|2592.82e-19139-3121-58+1291308e-31452-787473-588-3608PREDICTED: THO complex subunit 1-like isoform X1 [Citrus sinensis]
ref|XP_011020432.1|4784.32e-16139-3121-58+1201351e-32371-787473-598-3608PREDICTED: THO complex subunit 1-like [Populus euphratica]
ref|XP_010057860.1|1395.13e-20139-3121-58+1341241e-28371-787474-598-3608PREDICTED: THO complex subunit 1 [Eucalyptus grandis] gb|KCW75199.1| hypothetical protein EUGRSUZ_E03954 [Eucalyptus gra
ref|XP_009353122.1|1594.74e-20139-3121-58+1361242e-28446-787474-584-3603PREDICTED: THO complex subunit 1 [Pyrus x bretschneideri] ref|XP_009353123.1| PREDICTED: THO complex subunit 1 [Pyrus x
gb|KDP40562.1|1494.74e-20139-3121-58+1391196e-27452-787474-588-3608hypothetical protein JCGZ_24561 [Jatropha curcas]
ref|XP_002303943.2|4384.32e-16139-3121-58+1311292e-30371-787492-619-3629hypothetical protein POPTR_0003s19340g [Populus trichocarpa] gb|EEE78922.2| hypothetical protein POPTR_0003s19340g [Popu
ref|XP_002529986.1|2891.75e-19139-3121-58+1381204e-27371-787474-598-3608nuclear matrix protein, putative [Ricinus communis] gb|EEF32391.1| nuclear matrix protein, putative [Ricinus communis]
ref|XP_007148665.1|2692.04e-19139-3121-58+1431145e-25371-787473-594-3604hypothetical protein PHAVU_005G004500g [Phaseolus vulgaris] gb|ESW20659.1| hypothetical protein PHAVU_005G004500g [Phase
ref|XP_008460496.1|4086.73e-17148-31210-64+1401169e-26371-787480-604-3614PREDICTED: THO complex subunit 1 [Cucumis melo]
gb|KGN51016.1|4984.03e-16148-31210-64+1411161e-25371-787480-604-3614hypothetical protein Csa_5G407100 [Cucumis sativus]
ref|XP_004140313.1|4884.02e-16148-31210-64+1421151e-25371-787473-597-3607PREDICTED: THO complex subunit 1-like [Cucumis sativus]
ref|XP_003522894.1|3291.37e-19139-3121-58+1461062e-22371-787474-595-3605PREDICTED: THO complex subunit 1 isoform X1 [Glycine max] ref|XP_006578423.1| PREDICTED: THO complex subunit 1 isoform X
ref|XP_010684230.1|3390.11e-18139-3121-58+1501001e-20371-787410-535-3545PREDICTED: THO complex subunit 1 isoform X2 [Beta vulgaris subsp. vulgaris]
ref|XP_010684229.1|3590.12e-18139-3121-58+1521002e-20371-787472-597-3607PREDICTED: THO complex subunit 1 isoform X1 [Beta vulgaris subsp. vulgaris]
ref|XP_004307195.1|1894.07e-20139-3121-58+15594.04e-18449-787473-588-3611PREDICTED: THO complex subunit 1 isoform X1 [Fragaria vesca subsp. vesca]
ref|XP_004498672.1|3986.73e-17139-3121-58+1511011e-20446-787463-576-3595PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 1-like [Cicer arietinum]
ref|XP_010557907.1|4584.02e-16139-3121-58+1481026e-21446-787473-590-3600PREDICTED: THO complex subunit 1 isoform X2 [Tarenaya hassleriana]
ref|XP_010557906.1|4684.02e-16139-3121-58+1471025e-21446-787474-591-3601PREDICTED: THO complex subunit 1 isoform X1 [Tarenaya hassleriana]
ref|XP_010266403.1|4185.96e-17139-31234-91+15498.22e-19467-787507-613-3635PREDICTED: THO complex subunit 1-like [Nelumbo nucifera]
gb|EYU26934.1|21055e-24139-3121-58+17373.91e-11455-787474-595-3616hypothetical protein MIMGU_mgv1a003005mg [Erythranthe guttata]
ref|XP_010271740.1|5082.49e-16139-31234-91+15784.75e-15371-787507-633-3638PREDICTED: THO complex subunit 1-like [Nelumbo nucifera]
ref|XP_006847924.1|5879.71e-14139-31236-93+15880.99e-14452-787510-624-3667hypothetical protein AMTR_s00029p00122290 [Amborella trichopoda] gb|ERN09505.1| hypothetical protein AMTR_s00029p0012229
ref|XP_009385660.1|5182.09e-16139-31235-92+16475.94e-12446-787420-524-3563PREDICTED: THO complex subunit 1 isoform X2 [Musa acuminata subsp. malaccensis]
ref|XP_009385659.1|5282.01e-15139-31235-92+16575.94e-12446-787510-614-3653PREDICTED: THO complex subunit 1 isoform X1 [Musa acuminata subsp. malaccensis]
ref|XP_002871388.1|5979.02e-14139-3121-58+15978.65e-13443-787475-581-3597hypothetical protein ARALYDRAFT_908935 [Arabidopsis lyrata subsp. lyrata] gb|EFH47647.1| hypothetical protein ARALYDRAF
ref|XP_010933275.1|5382.01e-15139-31234-91+17274.31e-11470-787507-604-3652PREDICTED: THO complex subunit 1 [Elaeis guineensis]
ref|XP_010452987.1|5680.17e-15127-31220-81+17174.31e-11443-787497-605-3621PREDICTED: THO complex subunit 1-like isoform X1 [Camelina sativa]
ref|XP_006399470.1|5580.54e-15139-3121-58+17473.62e-11443-787466-571-3587hypothetical protein EUTSA_v10013059mg [Eutrema salsugineum] gb|ESQ40923.1| hypothetical protein EUTSA_v10013059mg [Eutr
ref|XP_010452988.1|5779.39e-15139-3121-58+17074.78e-12443-787474-582-3598PREDICTED: THO complex subunit 1-like isoform X2 [Camelina sativa]
ref|XP_006399469.1|5480.54e-15139-3121-58+17673.22e-11443-787465-570-3586hypothetical protein EUTSA_v10013059mg [Eutrema salsugineum] gb|ESQ40922.1| hypothetical protein EUTSA_v10013059mg [Eutr
dbj|BAB09407.1|6576.68e-14139-3121-58+16177.01e-12443-787466-572-3588unnamed protein product [Arabidopsis thaliana]
gb|AAN33204.1|6876.68e-14139-3121-58+16077.01e-12443-787477-583-3599At5g09860/MYH9_7 [Arabidopsis thaliana]
ref|NP_568219.1|6776.68e-14139-3121-58+16277.01e-12443-787477-583-3599THO complex subunit 1 [Arabidopsis thaliana] sp|Q93VM9.1|THOC1_ARATH RecName: Full=THO complex subunit 1; Short=AtTHO1;
ref|NP_001190269.1|6676.68e-14139-3121-58+16376.62e-12443-787476-582-3598THO complex subunit 1 [Arabidopsis thaliana] gb|AED91457.1| THO complex subunit 1 [Arabidopsis thaliana]
ref|XP_010491629.1|6078.62e-14139-3121-58+17573.22e-11443-787478-586-3602PREDICTED: THO complex subunit 1 [Camelina sativa]
ref|XP_006287317.1|7176.31e-13139-3121-58+16875.15e-12443-787475-581-3597hypothetical protein CARUB_v10000519mg [Capsella rubella] gb|EOA20215.1| hypothetical protein CARUB_v10000519mg [Capsell
ref|XP_006287318.1|7276.31e-13139-3121-58+16975.16e-12443-787476-582-3598hypothetical protein CARUB_v10000519mg [Capsella rubella] gb|EOA20216.1| hypothetical protein CARUB_v10000519mg [Capsell
ref|XP_010422932.1|6178.62e-14139-3121-58+17872.06e-11443-787477-585-3601PREDICTED: THO complex subunit 1-like isoform X2 [Camelina sativa]
ref|XP_010422931.1|7076.61e-13127-31220-81+17772.06e-11443-787500-608-3624PREDICTED: THO complex subunit 1-like isoform X1 [Camelina sativa]
ref|XP_008797926.1|7471.65e-12139-31234-90+16775.55e-12470-787506-603-3651PREDICTED: THO complex subunit 1 isoform X2 [Phoenix dactylifera]
ref|XP_007010829.1|21447e-36446-787444-561-3572Nuclear matrix protein-related isoform 2 [Theobroma cacao] gb|EOY19639.1| Nuclear matrix protein-related isoform 2 [Theo
ref|XP_007010830.1|11437e-36446-787329-446-3457Nuclear matrix protein-related isoform 3 [Theobroma cacao] ref|XP_007010832.1| Nuclear matrix protein-related isoform 3
emb|CAN81713.1|61373e-33371-787538-655-3665hypothetical protein VITISV_038974 [Vitis vinifera]
emb|CDX85792.1|6477.07e-14115-31210-75+18059.78e-07443-787492-596-3612BnaA02g00210D [Brassica napus]
ref|XP_010327387.1|71363e-33371-787374-499-3508PREDICTED: THO complex subunit 1 isoform X2 [Solanum lycopersicum]
ref|XP_009771508.1|81364e-33371-787398-523-3533PREDICTED: THO complex subunit 1 isoform X2 [Nicotiana sylvestris]
emb|CDY40064.1|6976.69e-14136-31216-74+18159.31e-06443-787508-612-3628BnaC02g00660D [Brassica napus]
ref|XP_010659080.1|111355e-33371-787410-527-3537PREDICTED: THO complex subunit 1-like isoform X3 [Vitis vinifera]
ref|XP_010327384.1|131355e-33371-787410-535-3544PREDICTED: THO complex subunit 1 isoform X1 [Solanum lycopersicum]
ref|XP_009125342.1|6278.22e-14139-3121-58+18256.61e-05443-787477-590-3606PREDICTED: THO complex subunit 1 isoform X2 [Brassica rapa]
ref|XP_009125341.1|6378.22e-14139-3121-58+18356.21e-05443-787478-591-3607PREDICTED: THO complex subunit 1 isoform X1 [Brassica rapa]
gb|KJB75026.1|221336e-32371-787429-556-3566hypothetical protein B456_012G019300 [Gossypium raimondii]
ref|XP_009608816.1|301282e-30458-787398-511-3529PREDICTED: THO complex subunit 1 isoform X2 [Nicotiana tomentosiformis]
ref|XP_008240508.1|231267e-32446-78724-141-3159PREDICTED: THO complex subunit 1-like [Prunus mume]
ref|XP_006649251.1|8269.72e-11139-31249-106+18455.52e-05452-787522-625-3644PREDICTED: THO complex subunit 1-like [Oryza brachyantha]
ref|XP_008360535.1|271246e-31446-78739-149-3168PREDICTED: THO complex subunit 1-like [Malus domestica]
emb|CAN77205.1|351231e-28371-787358-497-3507hypothetical protein VITISV_014783 [Vitis vinifera]
ref|NP_001048715.1|8667.81e-10139-31249-106+18552.03e-04452-787519-622-3638Os03g0110400 [Oryza sativa Japonica Group] gb|ABF93587.1| THO complex subunit 1, putative, expressed [Oryza sativa Japon
gb|AAN61477.1|8567.81e-10139-31249-106+18652.03e-04452-787534-637-3653Unknown protein [Oryza sativa Japonica Group]
gb|EEE58188.1|8468.29e-11145-31260-115+18751.25e-04643hypothetical protein OsJ_09127 [Oryza sativa Japonica Group]
emb|CDP18815.1|451069e-23371-787330-453-3463unnamed protein product [Coffea canephora]
gb|KHN12335.1|441059e-23371-787308-429-3439THO complex subunit 1 [Glycine soja]
ref|XP_010684231.1|491016e-21371-787351-476-3486PREDICTED: THO complex subunit 1 isoform X3 [Beta vulgaris subsp. vulgaris] ref|XP_010684233.1| PREDICTED: THO complex
emb|CDP18816.1|11004e-24142-31212-68+1158unnamed protein product [Coffea canephora]
ref|XP_008240536.1|1096.73e-21139-3121-58+1452PREDICTED: THO complex subunit 1, partial [Prunus mume]
gb|KDO38373.1|595.56e-23139-3121-58+185hypothetical protein CISIN_1g043208mg, partial [Citrus sinensis]
gb|AFK47582.1|5395.53e-20371-78749-169-3179unknown [Lotus japonicus]
ref|XP_008367274.1|994.71e-21139-3121-58+1176PREDICTED: THO complex subunit 1-like [Malus domestica]
ref|XP_008391776.1|1294.71e-20139-3121-58+1423PREDICTED: THO complex subunit 1, partial [Malus domestica]
ref|XP_011469469.1|1694.05e-20139-3121-58+1525PREDICTED: THO complex subunit 1 isoform X2 [Fragaria vesca subsp. vesca]
ref|XP_007010831.1|3190.17e-19139-3122-59+1423Nuclear matrix protein-related isoform 4, partial [Theobroma cacao] gb|EOY19641.1| Nuclear matrix protein-related isofo
emb|CAN77893.1|3885.51e-17133-309186-244+1327hypothetical protein VITISV_030448 [Vitis vinifera]
gb|KDO44607.1|5684.34e-17452-6431-67-387hypothetical protein CISIN_1g040840mg, partial [Citrus sinensis]
ref|XP_004162641.1|4284.02e-16148-31214-68+1483PREDICTED: THO complex subunit 1-like [Cucumis sativus]
gb|EPS68583.1|4484.02e-16142-3122-58+1510hypothetical protein M569_06184, partial [Genlisea aurea]
ref|XP_008797925.1|6675.55e-12470-787438-535-3583PREDICTED: THO complex subunit 1 isoform X1 [Phoenix dactylifera]
ref|XP_004986033.1|7372.43e-12139-31244-101+1638PREDICTED: THO complex subunit 1-like [Setaria italica]
gb|EMS55911.1|7671.27e-12139-31246-103+1593hypothetical protein TRIUR3_26611 [Triticum urartu]
gb|EMT12508.1|7771.28e-12139-31245-102+1666hypothetical protein F775_14078 [Aegilops tauschii]
dbj|BAK02227.1|7570.96e-12139-31243-100+1470predicted protein [Hordeum vulgare subsp. vulgare]
ref|XP_008681264.1|7870.91e-11133-3127-66+1604PREDICTED: hypothetical protein isoform X1 [Zea mays] tpg|DAA42877.1| TPA: hypothetical protein ZEAMMB73_799316 [Zea may
ref|XP_002468664.1|7970.91e-11139-31243-100+1637hypothetical protein SORBIDRAFT_01g049910 [Sorghum bicolor] gb|EER95662.1| hypothetical protein SORBIDRAFT_01g049910 [So
ref|NP_001159168.1|8070.51e-11139-31243-100+1638hypothetical protein [Zea mays] gb|ACN25299.1| unknown [Zea mays] tpg|DAA42878.1| TPA: hypothetical protein ZEAMMB73_799
ref|XP_010229325.1|8169.72e-11139-31244-101+1638PREDICTED: THO complex subunit 1 isoform X1 [Brachypodium distachyon]
ref|XP_003558999.1|8369.72e-11139-31244-101+1630PREDICTED: THO complex subunit 1 isoform X2 [Brachypodium distachyon]
ref|XP_001753133.1|8766.62e-10139-31219-76+1566predicted protein [Physcomitrella patens] gb|EDQ82174.1| predicted protein [Physcomitrella patens]
emb|CBI35083.3|7958.22e-07371-61942-108-3118unnamed protein product [Vitis vinifera]
ref|XP_002992565.1|8852.81e-05142-31249-105+1583hypothetical protein SELMODRAFT_135550 [Selaginella moellendorffii] gb|EFJ06371.1| hypothetical protein SELMODRAFT_13555
ref|XP_002972508.1|8952.42e-05583hypothetical protein SELMODRAFT_96989 [Selaginella moellendorffii] gb|EFJ26594.1| hypothetical protein SELMODRAFT_96989
ref|XP_004155746.1|378115191PREDICTED: uncharacterized protein LOC101232578 [Cucumis sativus]