clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF001M11 | Sequence | 217 | 003686 (5) | ||||||||
JMSF013B23 | Sequence | 222 | 003686 (5) | 719 | 004339 (4) | emb|CDX97868.1| | 7e-39 | BnaC04g40710D [Brassica napus] | |||
JMSF024J08 | Sequence | 696 | 003686 (5) | ref|XP_010650926.1| | 123 | PREDICTED: uncharacterized protein LOC100253483 [Vitis vinifera] | 747 | 004339 (4) | emb|CDX97868.1| | 3e-45 | BnaC04g40710D [Brassica napus] |
JMSF026G16 | Sequence | 623 | 003686 (5) | ref|XP_010650926.1| | 117 | PREDICTED: uncharacterized protein LOC100253483 [Vitis vinifera] | 803 | 004339 (4) | emb|CDX97868.1| | 1e-50 | BnaC04g40710D [Brassica napus] |
JMSF039H19 | Sequence | 689 | 003686 (5) | ref|XP_010650926.1| | 122 | PREDICTED: uncharacterized protein LOC100253483 [Vitis vinifera] | 842 | 004339 (4) | emb|CDY02002.1| | 3e-44 | BnaC04g14990D [Brassica napus] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003686============================================ 696 ============================================Contig004339============================================ 842 9 -------------------------------------------------------------------------------------------------->JMSF039H19 <---------------------------------------------------------------------------------------------------rJMSF039H19 11 --------------------------------------------------------------------------------------------------->JMSF024J08 <---------------------------------------------------------------------------------------rJMSF024J08 12 ------------------------------->JMSF013B23 <-----------------------------------------------------------------------------------rJMSF013B23 12 ----------------------------------------------------------------------------------------->JMSF026G16 <-----------------------------------------------------------------------------------------rJMSF026G16 ------------------------------>JMSF001M11-