clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF029C23 | Sequence | 582 | 001879 (9) | ref|XP_009786487.1| | 7e-44 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | 741 | 012532 (5) | ref|XP_009786487.1| | 6e-11 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR |
JMFF046E03 | Sequence | 627 | 001879 (9) | ref|XP_009786487.1| | 2e-44 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | 605 | 012532 (5) | |||
JMFS004C12 | Sequence | 197 | 001879 (9) | ||||||||
JMFS008E08 | Sequence | 623 | 001879 (9) | ref|XP_009786487.1| | 2e-57 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | |||||
JMFS041G05 | Sequence | 614 | 001879 (9) | ref|XP_009786487.1| | 4e-56 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | |||||
JMFS068G01 | Sequence | 618 | 001879 (9) | ref|XP_009786487.1| | 2e-58 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | |||||
JMFS072G07 | Sequence | 627 | 001879 (9) | ref|XP_009786487.1| | 4e-59 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR | |||||
JMFS084C07 | Sequence | 608 | 012532 (5) | ref|XP_009627009.1| | 2e-76 | PREDICTED: auxin response factor 1 [Nicotiana tomentosiformis] ref|XP_009627014. | |||||
JMSF009M02 | Sequence | 390 | 001879 (9) | 687 | 012532 (5) | ||||||
JMSF013D21 | Sequence | 231 | 001879 (9) | 737 | 012532 (5) | ref|XP_009786487.1| | 3e-12 | PREDICTED: auxin response factor 1 [Nicotiana sylvestris] ref|XP_009786488.1| PR |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001879============================================ 677 ============================================Contig012532============================================1161 27 -------------------------------------------------------->JMSF009M02 <----------------------------------------------------------rJMSF009M02 37 -------------------------------------------------------------------------------------------->JMFF046E03 <---------------------------------------------------rJMFF046E03 113 --------------------------------->JMSF013D21 <----------------------------------------------------------rJMSF013D21 113 ------------------------------------------------------------------------------------->JMFF029C23 <----------------------------------------------------------rJMFF029C23 ------------------------------------------------------------------------------------------->JMFS008E08- -------------------------------------------------------------------------------------------->JMFS072G07- ------------------------------------------------------------------------------------------>JMFS041G05- ------------------------------------------------------------------------------------------>JMFS068G01- ---------------------------->JMFS004C12- --------------------------------------------------->JMFS084C07-