Contig 012532:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS084C07-                                                  AAAGAGACCGGCAAATGGCTA
                      ____________________________________________________________
consensus                                                    AAAGAGACCGGCAAATGGCTA
 
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JMFS084C07-           CAGGTTATTTGGAATTGAGTTGCTGGACCATTCCACGGTTGAAGATACCTCACCCGTGGC
                      ____________________________________________________________
consensus             CAGGTTATTTGGAATTGAGTTGCTGGACCATTCCACGGTTGAAGATACCTCACCCGTGGC
 
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JMFS084C07-           TGCACCTCCAGCTGTGGTGGAGAGTCATCCTAATCCATCTTTCGATACTGAATCTGACCA
                      ____________________________________________________________
consensus             TGCACCTCCAGCTGTGGTGGAGAGTCATCCTAATCCATCTTTCGATACTGAATCTGACCA
 
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JMFS084C07-           AAATTCTGACCCATCAGACCCTACTCAATCTGACATTGATCCTGAAAGATCATCACTGAG
                      ____________________________________________________________
consensus             AAATTCTGACCCATCAGACCCTACTCAATCTGACATTGATCCTGAAAGATCATCACTGAG
 
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JMFS084C07-           ATCCACCCATGAATCACAAAGCAAGCAAATTAGGAGCTGCACTAAGGTCCACATGCAAGG
                      ____________________________________________________________
consensus             ATCCACCCATGAATCACAAAGCAAGCAAATTAGGAGCTGCACTAAGGTCCACATGCAAGG
 
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JMFS084C07-           AAAGGCAGTTGGGAGAGCAGTAGATCTTGCAGGGTTTGATGGGTATGAAGATTTGCTCAA
                      ____________________________________________________________
consensus             AAAGGCAGTTGGGAGAGCAGTAGATCTTGCAGGGTTTGATGGGTATGAAGATTTGCTCAA
 
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JMFS084C07-           GAAATTGGACGAGATGTTTGAGATGGAAGGTGAACTGTGTGGATCAGTCAAGAAATGGCA
                      ____________________________________________________________
consensus             GAAATTGGACGAGATGTTTGAGATGGAAGGTGAACTGTGTGGATCAGTCAAGAAATGGCA
 
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JMFS084C07-           GGTTGTGTACACAGACGATGAGGATGACATGATGATGGTTGGAGACGACCCATGGCATGA
rJMSF013D21+                     CAGACGATGAGGATGACATGATGATGGTTGGAGACGACCCATGGCATGA
rJMFF029C23+                     CAGACGATGAGGATGACATGATGATGGTTGGAGACGACCCATGGCATGA
                      ____________________________________________________________
consensus             GGTTGTGTACACAGACGATGAGGATGACATGATGATGGTTGGAGACGACCCATGGCATGA
 
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JMFS084C07-           ATTCTGCTTCATGGTCCGAAAAATCTACATCTACTCGAATGAAGAAGCCAAGATGCTTTC
rJMSF013D21+          ATTTTGCTTCATGGTCCGAAAAATCTACATCTACTCGAATGAAGAAGCCAAGATGCTTTC
rJMFF029C23+          ATTTTGCTTCATGGTCCGAAAAATNTACATNTACTCGAATGAAGAAGCCAAGATGCTTTC
rJMSF009M02+                                           CTCGAATGAAGAAGCCAAGATGCTTTC
                      ____________________________________________________________
consensus             ATTTTGCTTCATGGTCCGAAAAATCTACATCTACTCGAATGAAGAAGCCAAGATGCTTTC
 
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JMFS084C07-           ACCTAAGATTAAGCTCCCTGCCAAGGACGTTAAACCATGCAAGCCAGTTTCAGATGCTGC
rJMSF013D21+          ACCTAAGATTAAGCTCCCTGCCAAGGACGTTAAACCATGCAAGCCAGTTTCAGATGCTGC
rJMFF029C23+          ACCTAAGATTAAGCTCCCTGCCAAGGACGTTAAACCATGCAAGCCAGTTTCAGATGCTGC
rJMFF046E03+                                                             AGATGCTGC
rJMSF009M02+          ACCTAAGATTAAGCTCCCTGCCAAGGACGTTAAACCATGCAAGCCAGTTTCAGATGCTGC
                      ____________________________________________________________
consensus             ACCTAAGATTAAGCTCCCTGCCAAGGACGTTAAACCATGCAAGCCAGTTTCAGATGCTGC
 
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JMFS084C07-           TCCAAACAGCACCGAGGAACAGGCATGACGCCTACCTACCCCCTCAC             
rJMSF013D21+          TCCAAACAGCACCGAGGAACAGGCATGACGCCTACCTACCCCCTCACTCTTCAGAAGACA
rJMFF029C23+          TCCAAACAGCACCGAGGAACAGGCATGACGCCTACCTACCCCCTCACTTTTCAGAAGACA
rJMFF046E03+          TCCAAACAGCACCGAGGAACAGGCATGACGCCTACCTACCCCCTCACTTTTCAGAAGACA
rJMSF009M02+          TCCAAACAGCNCCGAGGAACAGGCATGACGCCTACCTACCCCCTCACTCTTCAGAAGACA
                      ____________________________________________________________
consensus             TCCAAACAGCACCGAGGAACAGGCATGACGCCTACCTACCCCCTCACTTTTCAGAAGACA
 
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rJMSF013D21+          AAGTAATAACACGGGACCGGAGGACATACCCCCCTCGTGATTTTTATTTTGACTGCAAGC
rJMFF029C23+          AAGTAATAACNCGGGACCGGAGGACATACCCCCCTCGTGATTTTTATTTTGACTGCAAGC
rJMFF046E03+          AAGTAATAACACGGGACCGGAGGACATACCCCCCTCGTGATTTTTATTTTGACTGCAAGC
rJMSF009M02+          AAGTAATAACACGGGACCGGAGGACATACCCCCCTCGTGATTTTTATTTTGACTGCAAGC
                      ____________________________________________________________
consensus             AAGTAATAACACGGGACCGGAGGACATACCCCCCTCGTGATTTTTATTTTGACTGCAAGC
 
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rJMSF013D21+          GTTGTTGAGCCTGACACATAACTCATGCTGAAAGGGCCGATTTTGTTAGTTAACTTACCG
rJMFF029C23+          GTTGTTGAGCCTGACACATAACTCATGCTGAAAGGGCCGATTTTGTTAGTTAACTTACCG
rJMFF046E03+          GTTGTTGAGCCTGACACATAACTCATGCTGAAAGGGCCGATTTTGTTAGTTAACTTACCG
rJMSF009M02+          GTTGTTGAGCCTGACACATAACTCATGCTGAAAGGGCCGATTTTGTTAGTTAACTTACCG
                      ____________________________________________________________
consensus             GTTGTTGAGCCTGACACATAACTCATGCTGAAAGGGCCGATTTTGTTAGTTAACTTACCG
 
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rJMSF013D21+          TGTGGTGGTGGTGGGAAGAAAGATCAGATAGCTGGCAAGACACNGTCTGTGCACTAAAGA
rJMFF029C23+          TGTGGTGGTGGTGGGAAGAAAGATCAGATAGCTGGCAAGACACAGTNTGTGCACTAAAGA
rJMFF046E03+          TGTGGTGGTGGTGGGAAGAAAGATCAGATAGCTGGCAAGACACAGTCTGTGCACTAAAGA
rJMSF009M02+          TGTGGTGGTGGTGGGAAGAAAGATCAGATAGCTGGCAAGACACNGTCTGTGCNCTAAAGA
                      ____________________________________________________________
consensus             TGTGGTGGTGGTGGGAAGAAAGATCAGATAGCTGGCAAGACACAGTCTGTGCACTAAAGA
 
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rJMSF013D21+          TAAGAACTCCTATCCCTATCCTAGTAGNGTCTTTGTTTTCATGGTTTCTGTACGTTTTTC
rJMFF029C23+          TAAGAACTCCTATCCCTATCCTAGTAGTGTCTTTGTTTTCATGGTTTCTGTACGTTTTTC
rJMFF046E03+          TAAGAACTCCTATCCCTATCCTAGTAGTGTCTTTGTTTTCATGGTTTCTGTACGTTTTTC
rJMSF009M02+          TAAGAACTCCTATCCCTATCCTAGTAGTGTCTTTGTTTTCATGGTTTCTGTACGTTTTTC
                      ____________________________________________________________
consensus             TAAGAACTCCTATCCCTATCCTAGTAGTGTCTTTGTTTTCATGGTTTCTGTACGTTTTTC
 
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rJMSF013D21+          TTGTCTGGACTCGAGTTAGTTATGGAGAAGAAAGCGTGGACTACCTACCGCCTCTAATGT
rJMFF029C23+          TTGTNTGGACTCGAGTTAGTTATGGAGAAGAAAGCGTGGACTACCTACCGCCTNTAATGT
rJMFF046E03+          TTGTCTGGACTCGAGTTAGTTATGGAGAAGAAAGCGTGGACTACCTACCGCCTCTAATGT
rJMSF009M02+          TTGTCTGGACTCGAGTTAGTTATGGAGAAGAAAGCGTGGACTACCTACCGCCTCTAATGT
                      ____________________________________________________________
consensus             TTGTCTGGACTCGAGTTAGTTATGGAGAAGAAAGCGTGGACTACCTACCGCCTCTAATGT
 
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rJMSF013D21+          GGAGGTGGACAGATACTCGTCTTTATTTATTTTAATTTTTTGGGGATTTTTGTAAGTTTT
rJMFF029C23+          GGAGGTGGACAGATACTCGTCTTTATTTATTTTAATTTTTTGGGGATTTTTGTAAGTTTT
rJMFF046E03+          GGAGGTGGACAGATACTCGTCTTTATTTATTTTAATTTTTTGGGGATTTTTGTAAGTTTT
rJMSF009M02+          GGAGGNGGACAGATACTCGTCTTTATTTATTTTAATTTTTTGGGGATTTTTGTAAGTTTT
                      ____________________________________________________________
consensus             GGAGGTGGACAGATACTCGTCTTTATTTATTTTAATTTTTTGGGGATTTTTGTAAGTTTT
 
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rJMSF013D21+          TTTTTTCTTCAATATAATAAAAGCGTGTCATCGTAATAGGTGGCTTCTGTGTATATATAT
rJMFF029C23+          TTTTTTCTTCAATATAATAAAAGCGTGTCATCGTAATAGGTGGCTTCTGTGTATATATAT
rJMFF046E03+          TTTTTTCTTCAATATAATAAAAGCGTGTCATCGTAATAGGTGGCTTCTGTGTATATATAT
rJMSF009M02+          TTTTTTCTTCAATATAATAAAAGCGTGTCATCGTAATAGGTGGCTTCTGTGTATATATAT
                      ____________________________________________________________
consensus             TTTTTTCTTCAATATAATAAAAGCGTGTCATCGTAATAGGTGGCTTCTGTGTATATATAT
 
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rJMSF013D21+          AGTAAGTAGATAGCCATAGCCTTGCATTTTTCAA                          
rJMFF029C23+          AGTAAGTAGATAGCCATAGCCTTGCATTTTTCAA                          
rJMFF046E03+          AGTAAGTAGATAGCCATAGCCTTGCATTTTTCAACTGGGGTCTTATCAGTTATCACGTGT
rJMSF009M02+          AGTAAGTAGATAGCCATAGCCTTGCATTTTTCAACTGGGGTCTTATCAGTTATCACGTGT
                      ____________________________________________________________
consensus             AGTAAGTAGATAGCCATAGCCTTGCATTTTTCAACTGGGGTCTTATCAGTTATCACGTGT
 
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rJMFF046E03+          ATGAATAGTGGTTGAAGGAAAAAAATTGTGTTTGTAATATGAGTTTGTTTGAGTCT    
rJMSF009M02+          ATGAATAGTGGTTGAAGGAAAAAAATTGTGTTTGTAATATGAGTTTGTTTGAGTCTGACT
                      ____________________________________________________________
consensus             ATGAATAGTGGTTGAAGGAAAAAAATTGTGTTTGTAATATGAGTTTGTTTGAGTCTGACT