clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFS076G03 | Sequence | 627 | 010026 (9) | ref|XP_006364983.1| | 4e-55 | PREDICTED: protein TIC 20-I, chloroplastic [Solanum tuberosum] | |||||
JMSF018O23 | Sequence | 270 | 009336 (4) | 731 | 010026 (9) | ref|XP_011028897.1| | 319 | PREDICTED: protein TIC 20-I, chloroplastic-like [Populus euphratica] ref|XP_0110 | |||
JMSF024N07 | Sequence | 661 | 009336 (4) | 759 | 010026 (9) | ref|XP_009587603.1| | 329 | PREDICTED: protein TIC 20-I, chloroplastic-like [Nicotiana tomentosiformis] | |||
JMSF034H23 | Sequence | 661 | 009336 (4) | 642 | 010026 (9) | gb|EPS67780.1| | 3e-81 | tic20-like protein, partial [Genlisea aurea] | |||
JMSF042M24 | Sequence | 777 | 010026 (9) | ref|XP_006364983.1| | 6e-86 | PREDICTED: protein TIC 20-I, chloroplastic [Solanum tuberosum] | 693 | 010026 (9) | ref|XP_011028897.1| | 305 | PREDICTED: protein TIC 20-I, chloroplastic-like [Populus euphratica] ref|XP_0110 |
JMSF050G08 | Sequence | 655 | 009336 (4) | 701 | 010026 (9) | emb|CDP18414.1| | 2e-99 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009336============================================ 661 ============================================Contig010026============================================1158 4 -------------------------------------------------------------------------------------------------->JMSF034H23 <------------------------------------------------------rJMSF034H23 30 -------------------------------------------------------------------------------------------------->JMSF050G08 <-----------------------------------------------------------rJMSF050G08 33 ---------------------------------------->JMSF018O23 <--------------------------------------------------------------rJMSF018O23 86 --------------------------------------------------------------------------------------------------->JMSF024N07 <----------------------------------------------------------------rJMSF024N07 ----------------------------------------------------->JMFS076G03- <----------------------------------------------------------rJMSF049O23# <-------------------------------------------------------------rJMFF023K19# <----------------------------------------------------------rJMSF042M24** ------------------------------------------------------------------>JMSF042M24**