clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF007A22 | Sequence | 292 | 007865 (4) | ref|XP_011085741.1| | 1e-41 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Sesamum indic | 725 | 013889 (5) | ref|XP_009592903.1| | 9e-78 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana tom |
JMSF007M02 | Sequence | 380 | 007865 (4) | ref|XP_009774058.1| | 6e-24 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana syl | 685 | 013889 (5) | ref|XP_009592903.1| | 2e-43 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana tom |
JMSF020F21 | Sequence | 621 | 007865 (4) | ref|XP_009774058.1| | 2e-57 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana syl | 780 | 013889 (5) | ref|XP_009592903.1| | 4e-61 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana tom |
JMSF021A22 | Sequence | 620 | 007865 (4) | ref|XP_011085741.1| | 3e-71 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Sesamum indic | 725 | 013889 (5) | ref|XP_009592903.1| | 9e-78 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana tom |
JMSF043D22 | Sequence | 728 | 013889 (5) | ref|XP_009592903.1| | 1e-63 | PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Nicotiana tom |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007865============================================ 762 ============================================Contig013889============================================ 880 13 -------------------------------------------------------------------------------->JMSF020F21 <---------------------------------------------------------------------------------------rJMSF020F21 56 ------------------------------------------------->JMSF007M02 <-----------------------------------------------------------------------------rJMSF007M02 245 -------------------------------------------------------------------------------->JMSF021A22 <--------------------------------------------------------------------------------rJMSF021A22 640 ------------------------------------->JMSF007A22 <--------------------------------------------------------------------------------rJMSF007A22 <-------------------------------------------------------------------------------rJMSF043D22-