List of clones in pair P000643.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020N18Sequence565006008 (8)ref|XP_006367734.1|2e-07PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]758012431 (6)gb|ACJ85808.1|1e-66unknown [Medicago truncatula]
JMFF031C03Sequence495006008 (8)615012431 (6)ref|XP_006367734.1|3e-42PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]
JMFF044J23Sequence631006008 (8)ref|XP_009629595.1|2e-27PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]616012431 (6)ref|XP_006367734.1|7e-37PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]
JMFS097D01Sequence627006008 (8)ref|XP_009629595.1|9e-30PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]
JMFS135G12Sequence595006008 (8)ref|XP_009629595.1|3e-53PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]
JMFS158G01Sequence579006008 (8)ref|XP_009629595.1|4e-21PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]
JMSF009B14Sequence243006008 (8)755012431 (6)ref|XP_006367734.1|4e-79PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]
JMSF040N15Sequence650006008 (8)ref|XP_009629595.1|6e-20PREDICTED: probable pectin methyltransferase QUA2 [Nicotiana tomentosiformis]809012431 (6)ref|XP_006367734.1|2e-80PREDICTED: probable pectin methyltransferase QUA2-like [Solanum tuberosum]

Contig 6008 BLAST Hits against nr-aa DB Show

Contig 12431 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig006008============================================ 912         ============================================Contig012431============================================ 880
  11 ------------------------------------------------------------->JMFF020N18                                                       <------------------------------------------------------------------------------------rJMFF020N18  
  22 ----------------------------------------------------->JMFF031C03                                                                             <---------------------------------------------------------------------rJMFF031C03  
  76        ---------------------------------------------------------------------->JMSF040N15                                 <------------------------------------------------------------------------------------------rJMSF040N15  
 130        -------------------------->JMSF009B14                                                                              <-----------------------------------------------------------------------------------rJMSF009B14  
 152                  -------------------------------------------------------------------->JMFF044J23                                               <---------------------------------------------------------------------rJMFF044J23  
                       -------------------------------------------------------------------->JMFS097D01-               
              -------------------------------------------------------------->JMFS158G01-                              
                                               --------------------------------------------------------->JMFS135G12-  
                                                                                                                      <--------------------------------------------------------------------------------------------------rJMSF038N13*