List of clones in pair P000596.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H05Sequence458012890 (5)ref|XP_006348235.1|9e-09PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Solanum tuberosum]657007169 (5)ref|XP_010242958.1|1e-104PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Nelumbo nucifera] ref|XP_0102
JMFF025K24Sequence454012890 (5)ref|XP_004244215.1|1e-05PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum]296007169 (5)ref|XP_010241980.1|2e-46PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform X4 [Nelumbo nucif
JMSF034G16Sequence457012890 (5)ref|XP_004244215.1|8e-04PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum]749007169 (5)ref|XP_010242958.1|2e-103PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Nelumbo nucifera] ref|XP_0102
JMSF035C17Sequence405012890 (5)707007169 (5)ref|XP_009804874.1|3e-76PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform X2 [Nicotiana syl
JMSF045O24Sequence487012890 (5)ref|XP_004244215.1|3e-07PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum]614007169 (5)ref|XP_009804874.1|2e-51PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform X2 [Nicotiana syl

Contig 12890 BLAST Hits against nr-aa DB Show

Contig 7169 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig012890============================================ 490         ============================================Contig007169============================================ 805
   7  ------------------------------------------------------------------------------------------->JMSF034G16                                <-----------------------------------------------------------------------------rJMSF034G16  
  20  -------------------------------------------------------------------------------------------------->JMSF045O24                                      <--------------------------------------------------------------rJMSF045O24  
 105  --------------------------------------------------------------------->JMSF035C17                                <---------------------------------------------------------------------------------------rJMSF035C17  
 110   ------------------------------------------------------------------------------------------->JMFF001H05                               <-----------------------------------------------------------------rJMFF001H05  
 385 -------------------------------------------------------------------------------------------->JMFF025K24                                <-----------------------------rJMFF025K24