clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF046J23 | Sequence | 525 | 001580 (7) | gb|AAG50783.1|AC079027_6 | 3e-21 | hypothetical protein, 3' partial [Arabidopsis thaliana] | 521 | 001216 (5) | ref|XP_002316767.2| | 6e-29 | hypothetical protein POPTR_0011s09280g [Populus trichocarpa] gb|EEE97379.2| hypo |
JMSF007B04 | Sequence | 298 | 001580 (7) | 769 | 001216 (5) | gb|KDP39134.1| | 7e-75 | hypothetical protein JCGZ_00891 [Jatropha curcas] | |||
JMSF040O10 | Sequence | 614 | 001580 (7) | gb|AAG50783.1|AC079027_6 | 2e-29 | hypothetical protein, 3' partial [Arabidopsis thaliana] | 854 | 001216 (5) | ref|XP_002280015.1| | 362 | PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] emb|CBI26640.3| |
JMSF043F04 | Sequence | 778 | 001580 (7) | ref|XP_009592787.1| | 239 | PREDICTED: uncharacterized protein LOC104089563 [Nicotiana tomentosiformis] | 748 | 001216 (5) | gb|KDP39134.1| | 1e-76 | hypothetical protein JCGZ_00891 [Jatropha curcas] |
JMSF044F09 | Sequence | 817 | 001580 (7) | ref|XP_009592787.1| | 239 | PREDICTED: uncharacterized protein LOC104089563 [Nicotiana tomentosiformis] | 825 | 001216 (5) | ref|XP_002280015.1| | 342 | PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] emb|CBI26640.3| |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001580============================================ 996 ============================================Contig001216============================================1042 68 ---------------------------------------------------->JMFF046J23 <-------------------------------------------------rJMFF046J23 141 ----------------------------->JMSF007B04 <---------------------------------------------------------------------rJMSF007B04 375 ----------------------------------------->JMSF040O10 <---------------------------------------------------------------------------------rJMSF040O10 436 -------------------------------------------------------->JMSF043F04 <------------------------------------------------------------------------rJMSF043F04 569 ----------------------------------------------------------->JMSF044F09 <-------------------------------------------------------------------------------rJMSF044F09 ----------------------------------------------->JMFF009K20* ------------------------------------------------>JMFF007G10*