Contig 001580:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007G10Sequence488001580 (7)783012247 (2)gb|KDP39134.1|2e-80hypothetical protein JCGZ_00891 [Jatropha curcas]
JMFF009K20Sequence483001580 (7)695012247 (2)gb|KDP39134.1|4e-78hypothetical protein JCGZ_00891 [Jatropha curcas]
JMFF046J23Sequence525001580 (7)gb|AAG50783.1|AC079027_63e-21hypothetical protein, 3' partial [Arabidopsis thaliana]521001216 (5)ref|XP_002316767.2|6e-29hypothetical protein POPTR_0011s09280g [Populus trichocarpa] gb|EEE97379.2| hypo
JMSF007B04Sequence298001580 (7)769001216 (5)gb|KDP39134.1|7e-75hypothetical protein JCGZ_00891 [Jatropha curcas]
JMSF040O10Sequence614001580 (7)gb|AAG50783.1|AC079027_62e-29hypothetical protein, 3' partial [Arabidopsis thaliana]854001216 (5)ref|XP_002280015.1|362PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] emb|CBI26640.3|
JMSF043F04Sequence778001580 (7)ref|XP_009592787.1|239PREDICTED: uncharacterized protein LOC104089563 [Nicotiana tomentosiformis]748001216 (5)gb|KDP39134.1|1e-76hypothetical protein JCGZ_00891 [Jatropha curcas]
JMSF044F09Sequence817001580 (7)ref|XP_009592787.1|239PREDICTED: uncharacterized protein LOC104089563 [Nicotiana tomentosiformis]825001216 (5)ref|XP_002280015.1|342PREDICTED: uncharacterized protein LOC100253742 [Vitis vinifera] emb|CBI26640.3|

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF044F09+ ATAGAAGGTTNTGAAGCATCAGTAGCACTACTAGAT
                      ____________________________________________________________
consensus ATAGAAGGTTNTGAAGCATCAGTAGCACTACTAGAT
 
. : . : . : . : . : . :
JMSF044F09+ GGAGCACTAATTCCACCAGCAGCAGTGCCACTTGCAGACAGATTAGTGAAATTAGTTGAA
JMSF043F04+ CCACCAGCAGCAGTGCCACTTGCAGACAGATTAGTGAAATTAGTTGAA
                      ____________________________________________________________
consensus GGAGCACTAATTCCACCAGCAGCAGTGCCACTTGCAGACAGATTAGTGAAATTAGTTGAA
 
. : . : . : . : . : . :
JMSF044F09+ ATTGAGCTGGAGCTCACAGTTACACTGGTGCCTGAACTGTCAAGGGAACTTCTTGAGAGT
JMSF043F04+ ATTGAGCTGGAGCTCACAGTTACACTGGTGCCTGAACTGTCAAGGGAACTTCTTGAGAGT
                      ____________________________________________________________
consensus ATTGAGCTGGAGCTCACAGTTACACTGGTGCCTGAACTGTCAAGGGAACTTCTTGAGAGT
 
. : . : . : . : . : . :
JMSF044F09+ ATACTCCATTTCTCAATTTCATCATCTTGAACCTCACCATCTTTGGAAATCAGAGGTAGC
JMSF043F04+ ATACTCCATTTCTCAATTTCATCATCTTGAACCTCACCATCTTTGGAAATCAGAGGTAGC
                      ____________________________________________________________
consensus ATACTCCATTTCTCAATTTCATCATCTTGAACCTCACCATCTTTGGAAATCAGAGGTAGC
 
. : . : . : . : . : . :
JMSF044F09+ CTCAACCTTTGAGCAGCTTCTGCAACTACCATCCGATGCTCAAGAGCTTCATAAACCTGA
JMSF043F04+ CTCAACCTTTGAGCAGCTTCTGCAACTACCATCCGATGCTCAAGAGCTTCATAAACCTGA
                      ____________________________________________________________
consensus CTCAACCTTTGAGCAGCTTCTGCAACTACCATCCGATGCTCAAGAGCTTCATAAACCTGA
 
. : . : . : . : . : . :
JMSF044F09+ GGAGGATTTTTCAAACCGATCTGAGGGTAGTGGCCCTGAACGTCTCGAATACCACCAAGA
JMSF043F04+ GGAGGATTTTTCAAACCGATCTGAGGGTAGTGGCCCTGAACGTCTCGAATACCACCAAGA
                      ____________________________________________________________
consensus GGAGGATTTTTCAAACCGATCTGAGGGTAGTGGCCCTGAACGTCTCGAATACCACCAAGA
 
. : . : . : . : . : . :
JMSF044F09+ TTCACCACAGAAAGAGCTTGCTGATATTCTTCCACCATCCCAACTGCTTCTATGTAAACT
JMSF043F04+ TTCACCACAGAAAGAGCTTGCTGATATTCTTCCACCATCCCAACTGCTTCTATGTAAACT
                      ____________________________________________________________
consensus TTCACCACAGAAAGAGCTTGCTGATATTCTTCCACCATCCCAACTGCTTCTATGTAAACT
 
. : . : . : . : . : . :
JMSF044F09+ GCCAACGCTTCCAAATATTGCTGTCGCTCCTTCGTCATCTCCTCCCTCGCGAGTTGGAGA
JMSF043F04+ GCCAACGCTTCCAAATATTGCTGTCGCTCCTTCGTCATCTCCTCCCTCGCGAGTTGGAGA
JMSF040O10+ CCAACGCTTCCAAATATCGCTATCGCTCATTCGTCATCTCCTCCCTCGCGAGTTGGAGA
JMFF046J23+ TCCAAATATCGCTGTCGCTCTTTCGTCATCTCCTCCCTCGCGAGTTGGAGA
                      ____________________________________________________________
consensus GCCAACGCTTCCAAATATTGCTGTCGCTCCTTCGTCATCTCCTCCCTCGCGAGTTGGAGA
 
. : . : . : . : . : . :
JMSF044F09+ TCATAGTAGGTGGCTTTGGAAATGAGAGAACCATCGGGAGCTAAGCAGTGGCGCTCTAGT
JMSF043F04+ TCATAGTAGGTGGCTTTGGAAATGAGAGAACCATCGGGAGCTAAGCAGTGGCGCTCTAGT
JMSF040O10+ TCACAGTAGGTGGATTTGGAAATGAGAGAACCATCGGGAGCTAAGCAGTGGCGCTCTAGT
JMFF046J23+ TCACAGTAGGTGGATTGNGAAATGAGAGAACCATCGGGAGCTAAGCAGTGGCGCTCTAGT
JMFF007G10+ TAGT
                      ____________________________________________________________
consensus TCATAGTAGGTGGCTTTGGAAATGAGAGAACCATCGGGAGCTAAGCAGTGGCGCTCTAGT
 
. : . : . : . : . : . :
JMSF044F09+ TGGTCGATCAACTGAGTAACATCCGCCGACAGGTTGTGAGCTCCGGCGCCGAGTTCCTTC
JMSF043F04+ TGGTCGATCAACTGAGTAACATCCGCCGACAGGTTGTGAGCTCCGGCGCCGAGTTCCTTC
JMSF040O10+ TGGTCGATCAACTGAGTAACATCCGCTGGCAGGTTGTGAGCGCCGGCGCCGAGTTCCTTC
JMFF046J23+ TGGTCGATCAACTGAGTAACATCCGCTGGCAGGTTGTGAGCGCCGGCGCCGAGTTCCTTC
JMFF009K20+ TGGTCGATCAACTGAGTAACATCCGCTGGCAGGTTGTGAGCGCCGGCGCCGAGTTCCTTC
JMFF007G10+ TGGTCGATCAACTGAGTAACATCCGCTGGCAGGTTGTGAGCGCCGGCGCCGAGTTCCTTC
                      ____________________________________________________________
consensus TGGTCGATCAACTGAGTAACATCCGCTGGCAGGTTGTGAGCGCCGGCGCCGAGTTCCTTC
 
. : . : . : . : . : . :
JMSF044F09+ ACCATTTTTCGACCAACAACCAATCT
JMSF043F04+ ACCATTTTTCGACCAACAACCAATCTACACAAACT
JMSF040O10+ ACCATTTTTCGACCAACAATCAATCTACGCGAACTGTTGCAACTTCAATTTCATTTCAAA
JMSF007B04+ TACGCAAACTGTTGCAACTTCAA-TTCATTTCAAA
JMFF046J23+ ACCATTTTTCGACCAACAATCAATCTACGCAAACTGTTGCAACTTCAATTTCATTTCAAA
JMFF009K20+ NCCATTTTTNGACCAACAATCAATTTACGCAAACTGTTGCAACTTCAATTTCATTTCAAA
JMFF007G10+ ACCATTTTTNGACCAACAATCAATTTACGCAAACTGTTGCAACTTCAATTTCATTTCAAA
                      ____________________________________________________________
consensus ACCATTTTTCGACCAACAATCAATCTACGCAAACTGTTGCAACTTCAATTTCATTTCAAA
 
. : . : . : . : . : . :
JMSF040O10+ ATAATTGCTGAATCGACCCAGATTTGAACAGAAGGGTTTGGANGTCTATCTTCC------
JMSF007B04+ ATAATTGCTGAATCGACCCAGATTTGAACAGAAGGGTTTGGATGTCTATCTTCCCTTTCA
JMFF046J23+ ATAATTGCTGAATCGACCCAGATTTGAACAGAAGGGTTTGGATGTCTATCTTCCCTTTCA
JMFF009K20+ ATAATTGNTGAATCGACCCAGATTTGAACAGAAGGGTTTGGATGTNTATNTTCCCTTTCA
JMFF007G10+ ATAATTGCTGAATCGACCCAGATTTGAACAGAAGGGTTTGGATGTNTATNTTCCCTTTCA
                      ____________________________________________________________
consensus ATAATTGCTGAATCGACCCAGATTTGAACAGAAGGGTTTGGATGTCTATCTTCCCTTTCA
 
. : . : . : . : . : . :
JMSF040O10+ -------------CTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTCTGAGGAA
JMSF007B04+ AAATTGTTGATAGCTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTCTGAGGAA
JMFF046J23+ AAATTGTTGATAGCTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTCTGAGGAA
JMFF009K20+ AAATTGTTGATAGCTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTTTGAGGAA
JMFF007G10+ AAATTGTTGATAGCTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTTTGAGGAA
                      ____________________________________________________________
consensus AAATTGTTGATAGCTGGTTGTGGCTTGTGGAGACTCCCGACTGGAGTATGCTCTGAGGAA
 
. : . : . : . : . : . :
JMSF040O10+ CGTCGGCGGGCCGGCAGCAGCACTTCGCGGTGGACTNGGAGCCTGGCGGTGGTCT
JMSF007B04+ CGTCGGCGGGCCGGCAGCAGCACTTCGCGGTGGACTTGGAGCCTGGCGGTGGTCTATGAC
JMFF046J23+ CGTCGGCGGGCCGGCAGCAGCACTTCGCGGTGGACTTGGAGCCTGGCGGTGGTCTATGAC
JMFF009K20+ CGTCGGCGGGCCGGCAGCAGCNCTTCGCGGTGGACTTGGAGCCTGGCGGTGGTNTATGAC
JMFF007G10+ CGTCGGCGGGCCGGCAGCAGCNCTTCGCGGTGGACTTGGAGCCTGGCGGTGGTNTATGAC
                      ____________________________________________________________
consensus CGTCGGCGGGCCGGCAGCAGCACTTCGCGGTGGACTTGGAGCCTGGCGGTGGTCTATGAC
 
. : . : . : . : . : . :
JMSF007B04+ TGTGAGACTGACGGTGGCCTGAGGAATGGCGGATGGGTGTCAGACGGTGGTCCGTGACTC
JMFF046J23+ TGTGAGACTGACGGTGGCCTGAGGAATGGCGGATGGGTGTCAGACGGTGGTCCGTGACTC
JMFF009K20+ TGTGAGACTGACGGTGGCCTGAGGAATGGCGGATGGGTGTCAGACGGTGGTCCGTGACTC
JMFF007G10+ TGTGAGACTGACGGTGGCCTGAGGAATGGCGGATGGGTGTCAGACGGTGGTCCGTGACTC
                      ____________________________________________________________
consensus TGTGAGACTGACGGTGGCCTGAGGAATGGCGGATGGGTGTCAGACGGTGGTCCGTGACTC
 
. : . : . : . : . : . :
JMSF007B04+ CGGCGATCTCTTTGGGTTTCCC
JMFF046J23+ CGGCGATCTCTTTGGGTTTCCCGGCGTGGTGGCGAGAGGATGTGAATGCCTTAT
JMFF009K20+ CGGCGATNTNTTTGGGTTTCCCGGCGTGGTGGCGAGAGGATGTGAATGCCTTATAGGACC
JMFF007G10+ CGGCGATNTNTTTGGGTTTCCCGGCGTGGTGGCGAGAGGATGTGAATGCCTTATAGGNCC
                      ____________________________________________________________
consensus CGGCGATCTCTTTGGGTTTCCCGGCGTGGTGGCGAGAGGATGTGAATGCCTTATAGGACC
 
. : . : . : . : . : . :
JMFF009K20+ TCCTCACGGGTTTAACCCCTNTTNTTGTAGCCAAAAAAAAAATAATAAAAAAAATTGGAT
JMFF007G10+ TCCTCNCGGGTTTAACCCCTNTTNTTGTAGCCAAAAAAAAAATAATAAAAAAAATTGGAT
                      ____________________________________________________________
consensus TCCTCACGGGTTTAACCCCTNTTNTTGTAGCCAAAAAAAAAATAATAAAAAAAATTGGAT