clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF045D17 | Sequence | 647 | 004941 (5) | ref|XP_009610243.1| | 1e-89 | PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen | 605 | 001203 (5) | gb|AAB38796.1| | 8e-44 | farnesyltransferase beta subunit, partial [Nicotiana glutinosa] |
JMFF045N15 | Sequence | 647 | 004941 (5) | ref|XP_009610243.1| | 3e-85 | PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen | 578 | 001203 (5) | gb|AAB38796.1| | 1e-43 | farnesyltransferase beta subunit, partial [Nicotiana glutinosa] |
JMSF001H10 | Sequence | 481 | 004941 (5) | ref|XP_009610243.1| | 1e-57 | PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen | 683 | 001203 (5) | ref|XP_010315876.1| | 1e-49 | PREDICTED: farnesyl protein transferase subunit B isoform X2 [Solanum lycopersi |
JMSF004L07 | Sequence | 385 | 004941 (5) | emb|CDI30234.1| | 2e-35 | protein farnesyltransferase beta-subunit [Nicotiana tabacum] | 381 | 001203 (5) | gb|AAB38796.1| | 2e-38 | farnesyltransferase beta subunit, partial [Nicotiana glutinosa] |
JMSF033A16 | Sequence | 606 | 004941 (5) | ref|XP_009610243.1| | 7e-54 | PREDICTED: protein farnesyltransferase subunit beta isoform X3 [Nicotiana tomen | 701 | 001203 (5) | gb|AAB69757.1| | 9e-66 | farnesyl-protein transferase beta subunit [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig004941============================================ 706 ============================================Contig001203============================================ 827 61 ------------------------------------------------------------------------------------------->JMFF045D17 <------------------------------------------------------------------------rJMFF045D17 88 ------------------------------------------------------------------------------------------->JMFF045N15 <---------------------------------------------------------------------rJMFF045N15 128 ------------------------------------------------------>JMSF004L07 <---------------------------------------------rJMSF004L07 128 ------------------------------------------------------------------------------------->JMSF033A16 <------------------------------------------------------------------------------------rJMSF033A16 144 ----------------------------------------------------------------->JMSF001H10 <----------------------------------------------------------------------------------rJMSF001H10