List of clones in pair P000413.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017J16Sequence639000575 (7)ref|XP_009762245.1|1e-102PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c753001124 (6)ref|XP_009759585.1|4e-72PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMFF027A10Sequence617000575 (7)ref|XP_009762245.1|2e-103PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c734001124 (6)ref|XP_009759585.1|4e-86PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMFF039D21Sequence484000575 (7)ref|XP_009762245.1|4e-74PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c632001124 (6)ref|XP_009759585.1|1e-72PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMSF004F08Sequence211000575 (7)ref|XP_009762245.1|3e-07PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMSF025N24Sequence667000575 (7)ref|XP_010320594.1|2e-110PREDICTED: dehydroquinate dehydratase/shikimate:NADP oxidoreductase isoform X2 730001124 (6)ref|XP_009759585.1|3e-72PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMSF043P04Sequence712000575 (7)ref|XP_010320594.1|8e-124PREDICTED: dehydroquinate dehydratase/shikimate:NADP oxidoreductase isoform X2 483001124 (6)ref|XP_009759585.1|2e-66PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c
JMSF048N15Sequence719000575 (7)ref|XP_010320594.1|3e-122PREDICTED: dehydroquinate dehydratase/shikimate:NADP oxidoreductase isoform X2 508001124 (6)ref|XP_011071496.1|5e-71PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, c

Contig 575 BLAST Hits against nr-aa DB Show

Contig 1124 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig000575============================================ 768         ============================================Contig001124============================================ 755
  32     ---------------------------------------------------------------------------------->JMFF017J16                <---------------------------------------------------------------------------------------------------rJMFF017J16  
  50       ------------------------------------------------------------------------------->JMFF027A10                              <--------------------------------------------------------------------------------------rJMFF027A10  
  64       -------------------------------------------------------------->JMFF039D21                                                <-----------------------------------------------------------------------------------rJMFF039D21  
  96        -------------------------------------------------------------------------------------->JMSF025N24         <---------------------------------------------------------------------------------------------rJMSF025N24  
 218       -------------------------------------------------------------------------------------------->JMSF048N15                <----------------------------------------------------------------rJMSF048N15  
 257         ------------------------------------------------------------------------------------------->JMSF043P04                 <-----------------------------------------------------------rJMSF043P04  
     -------------------------->JMSF004F08-