List of clones in pair P000406.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C02Sequence568004485 (6)emb|CBI18223.3|5e-72unnamed protein product [Vitis vinifera]776005425 (6)emb|CDO97512.1|5e-140unnamed protein product [Coffea canephora]
JMFF025F16Sequence537004485 (6)emb|CBI18223.3|4e-76unnamed protein product [Vitis vinifera]832005425 (6)emb|CDO97512.1|4e-151unnamed protein product [Coffea canephora]
JMFF033F15Sequence598004485 (6)emb|CBI18223.3|5e-82unnamed protein product [Vitis vinifera]775005425 (6)ref|XP_009786904.1|2e-141PREDICTED: 60S ribosomal protein L3 [Nicotiana sylvestris]
JMFF041G20Sequence629004485 (6)ref|XP_009786904.1|2e-101PREDICTED: 60S ribosomal protein L3 [Nicotiana sylvestris]579005425 (6)ref|XP_010912010.1|2e-97PREDICTED: 60S ribosomal protein L3-like isoform X2 [Elaeis guineensis]
JMSF013F22Sequence215004485 (6)emb|CDY03839.1|8e-27BnaC01g29560D [Brassica napus]760005425 (6)emb|CDO97512.1|8e-141unnamed protein product [Coffea canephora]
JMSF017C17Sequence462004485 (6)ref|XP_010087922.1|3e-5760S ribosomal protein L3 [Morus notabilis] gb|EXB30757.1| 60S ribosomal protein 773005425 (6)emb|CDO97512.1|4e-135unnamed protein product [Coffea canephora]

Contig 4485 BLAST Hits against nr-aa DB Show

Contig 5425 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig004485============================================ 624         ============================================Contig005425============================================ 832
  20 ------------------------------------------------------------------------------------------>JMFF010C02                 <--------------------------------------------------------------------------------------------rJMFF010C02  
  31      ---------------------------------------------------------------------------------->JMFF025F16               <---------------------------------------------------------------------------------------------------rJMFF025F16  
  58      --------------------------------------------------------------------->JMSF017C17                                <--------------------------------------------------------------------------------------------rJMSF017C17  
  58      ------------------------------------------------------------------------------------------>JMFF033F15            <-------------------------------------------------------------------------------------------rJMFF033F15  
  60      ----------------------------->JMSF013F22                                                                         <------------------------------------------------------------------------------------------rJMSF013F22  
  82        -------------------------------------------------------------------------------------------->JMFF041G20                            <---------------------------------------------------------------------rJMFF041G20