List of clones in pair P001486.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034A09Sequence551009494 (10)ref|XP_004230866.1|9e-47PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]737005519 (5)emb|CAN61314.1|7e-19hypothetical protein VITISV_013389 [Vitis vinifera]
JMFN016K01Sequence600005519 (5)emb|CAN61314.1|2e-42hypothetical protein VITISV_013389 [Vitis vinifera]
JMFS038D01Sequence566009494 (10)gb|EYU37786.1|1e-48hypothetical protein MIMGU_mgv1a000855mg [Erythranthe guttata]
JMFS084H11Sequence618009494 (10)ref|XP_004230866.1|9e-60PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMFS089B01Sequence629009494 (10)ref|XP_004230866.1|4e-62PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMFS089B08Sequence619009494 (10)ref|XP_004230866.1|3e-58PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMFS110B05Sequence623009494 (10)ref|XP_004230866.1|2e-65PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMFS120A10Sequence628009494 (10)ref|XP_004230866.1|1e-64PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMFS147G11Sequence624009494 (10)ref|XP_004230866.1|3e-61PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]
JMSF009I19Sequence342009494 (10)ref|XP_009589593.1|1e-17PREDICTED: SWI/SNF complex subunit SWI3D [Nicotiana tomentosiformis]782005519 (5)emb|CAN61314.1|3e-38hypothetical protein VITISV_013389 [Vitis vinifera]
JMSF041L02Sequence818009494 (10)ref|XP_004230866.1|4e-86PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum]692005519 (5)emb|CAN61314.1|2e-25hypothetical protein VITISV_013389 [Vitis vinifera]

Contig 9494 BLAST Hits against nr-aa DB Show

Contig 5519 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig009494============================================ 819         ============================================Contig005519============================================ 847
  45  ---------------------------------------->JMSF009I19                                                                <--------------------------------------------------------------------------------------------rJMSF009I19  
  54   ------------------------------------------------------------------>JMFF034A09                                             <------------------------------------------------------------------------------------rJMFF034A09  
 198 --------------------------------------------------------------------------------------------------->JMSF041L02         <----------------------------------------------------------------------rJMSF041L02  
       -------------------------------------------------------------------------->JMFS089B08-                         
         -------------------------------------------------------------------------->JMFS084H11-                       
        --------------------------------------------------------------------------->JMFS147G11-                       
         ---------------------------------------------------------------------------->JMFS089B01-                     
           --------------------------------------------------------------------------->JMFS110B05-                    
            ------------------------------------------------------------------->JMFS038D01-                           
         ---------------------------------------------------------------------------->JMFS120A10-                     
                                                                                                                                                                    <-----------------------------------------------------rJMFF045D11# 
                                                                                                                      ---------------------------------------------------------------------->JMFN016K01-