clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF034A09 | Sequence | 551 | 009494 (10) | ref|XP_004230866.1| | 9e-47 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | 737 | 005519 (5) | emb|CAN61314.1| | 7e-19 | hypothetical protein VITISV_013389 [Vitis vinifera] |
JMFS038D01 | Sequence | 566 | 009494 (10) | gb|EYU37786.1| | 1e-48 | hypothetical protein MIMGU_mgv1a000855mg [Erythranthe guttata] | |||||
JMFS084H11 | Sequence | 618 | 009494 (10) | ref|XP_004230866.1| | 9e-60 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMFS089B01 | Sequence | 629 | 009494 (10) | ref|XP_004230866.1| | 4e-62 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMFS089B08 | Sequence | 619 | 009494 (10) | ref|XP_004230866.1| | 3e-58 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMFS110B05 | Sequence | 623 | 009494 (10) | ref|XP_004230866.1| | 2e-65 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMFS120A10 | Sequence | 628 | 009494 (10) | ref|XP_004230866.1| | 1e-64 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMFS147G11 | Sequence | 624 | 009494 (10) | ref|XP_004230866.1| | 3e-61 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | |||||
JMSF009I19 | Sequence | 342 | 009494 (10) | ref|XP_009589593.1| | 1e-17 | PREDICTED: SWI/SNF complex subunit SWI3D [Nicotiana tomentosiformis] | 782 | 005519 (5) | emb|CAN61314.1| | 3e-38 | hypothetical protein VITISV_013389 [Vitis vinifera] |
JMSF041L02 | Sequence | 818 | 009494 (10) | ref|XP_004230866.1| | 4e-86 | PREDICTED: SWI/SNF complex subunit SWI3D [Solanum lycopersicum] | 692 | 005519 (5) | emb|CAN61314.1| | 2e-25 | hypothetical protein VITISV_013389 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMSF041L02+ GTATCAACATTCGTAGCAGAATCAGGTTGTGGGAAAGGG
____________________________________________________________
consensus GTATCAACATTCGTAGCAGAATCAGGTTGTGGGAAAGGG
. : . : . : . : . : . :
JMSF041L02+ TGGTAATTGATCAAANCCCCAGTAGTCCAGAAACTCCATCACCTCTTGCCTTGCATCCAA
____________________________________________________________
consensus TGGTAATTGATCAAANCCCCAGTAGTCCAGAAACTCCATCACCTCTTGCCTTGCATCCAA
. : . : . : . : . : . :
JMFS120A10+ CGTG
JMFS110B05+ CGTG
JMFS089B01+ CGTG
JMSF041L02+ CACACCAGTCGAGAGCTCAGACAAATCCTTCAATTCAATACGAGTGTTTGGGTCTGCGTG
____________________________________________________________
consensus CACACCAGTCGAGAGCTCAGACAAATCCTTCAATTCAATACGAGTGTTTGGGTCTGCGTG
. : . : . : . : . : . :
JMFS120A10+ ATACTTTCTCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
JMFS084H11+ TAATCAAATTGCGTATCTCCATGTACATTNCAGGAGTCCTGTTTGGAGA
JMFS147G11+ TCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
JMFS038D01+ AGTCCTGTTTGGAGA
JMFS110B05+ ATACTTTCTCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
JMFS089B08+ TATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
JMFS089B01+ ATACTTTCTCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
JMSF041L02+ ATACTTTCTCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
____________________________________________________________
consensus ATACTTTCTCATAATCAAATTGCGTATCTCCATGTACATTTCAGGAGTCCTGTTTGGAGA
. : . : . : . : . : . :
JMFS120A10+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS084H11+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS147G11+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS038D01+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS110B05+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFF034A09+ CTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS089B08+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMFS089B01+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
JMSF041L02+ CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
____________________________________________________________
consensus CTTCCCATTAAAGAAGGATGGCATTGTTTGCTCCTCCAATGAATGAACTTTTGTCCAAGA
. : . : . : . : . : . :
JMFS120A10+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS084H11+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS147G11+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS038D01+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS110B05+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFF034A09+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS089B08+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMFS089B01+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
JMSF041L02+ AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
____________________________________________________________
consensus AAACCAACCAGCATGACTCGGCACCACATGAACATTAGCATCTCGAGACCTAATTGCTTC
. : . : . : . : . : . :
JMFS120A10+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS084H11+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS147G11+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS038D01+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS110B05+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFF034A09+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS089B08+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMFS089B01+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
JMSF041L02+ AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
____________________________________________________________
consensus AAACTCGGCTTCAATTTTTGCCTCCAACGCCTCGAAATCCTCCTTCGCTTCAATTGACGC
. : . : . : . : . : . :
JMFS120A10+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS084H11+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS147G11+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS038D01+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS110B05+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFF034A09+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS089B08+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMFS089B01+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
JMSF041L02+ TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTTTGGCCAGCAGCGCCGCATCCGCCTC
____________________________________________________________
consensus TTCCTCGGCCTTCCGCAGCTCCGCCCCTCCAACTCTGGCCAGCAGCGCCGCATCCGCCTC
. : . : . : . : . : . :
JMFS120A10+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS084H11+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS147G11+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS038D01+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS110B05+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFF034A09+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS089B08+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMFS089B01+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
JMSF009I19+ AATTTGAGGGTGAGGCGACGGNAGCGGTGTTGCTGGGCTGCTGTCG
JMSF041L02+ GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
____________________________________________________________
consensus GCTGCGGACGCCTGAATTTGAGGGTGAGGCGACGGGAGCGGTGTTGCTGGGCTGCTGTCG
. : . : . : . : . : . :
JMFS120A10+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS084H11+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS147G11+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS038D01+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS110B05+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFF034A09+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS089B08+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMFS089B01+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMSF009I19+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
JMSF041L02+ AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
____________________________________________________________
consensus AGCTCTGGTGCACGGACCGTTGTGGATCGGAGGAAAGGGCACCGGCGGCGGCTTTTCGCG
. : . : . : . : . : . :
JMFS120A10+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFS084H11+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFS147G11+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFS038D01+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFS110B05+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFF034A09+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCATAAGGCGCT
JMFS089B08+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMFS089B01+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMSF009I19+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
JMSF041L02+ AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
____________________________________________________________
consensus AGCCTGACGCTTCGAGGAAGTAGAAAGAGGAGTCGAAGTTCCACCGCTGCCTAAGGCGCT
. : . : . : . : . : . :
JMFS120A10+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS084H11+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS147G11+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS038D01+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS110B05+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFF034A09+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS089B08+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMFS089B01+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMSF009I19+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
JMSF041L02+ TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
____________________________________________________________
consensus TGCTTTCCGCTTCTGGCCTCCGCCCCTTCGCCGAGAAGTGGGTGGGTCCGAAGGTGGGGC
. : . : . : . : . : . :
JMFS120A10+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS084H11+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS147G11+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS038D01+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTGCCCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS110B05+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFF034A09+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS089B08+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMFS089B01+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTT-A
JMSF009I19+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTA-CCGCCGGCGGAGTGCCGCTATCTTTAA
JMSF041L02+ CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
____________________________________________________________
consensus CTCCGCCGCCTTCTGCGGGGTTGAGAAGCTTG-CCGCCGGCGGAGTGCCGCTATCTTTAA
. : . : . : . : . : . :
JMFS120A10+ ACTTCTCCTCCATGAGTAAGGATTG
JMFS084H11+ ACTTCTCCTCCATGAGTAAGGATTGC
JMFS147G11+ ACTTCTCCTCCATGAGTAAGGATTGCTATGGAG
JMFS110B05+ ACTTCTCCTCCATGA
JMFF034A09+ ACTTCTCCTCCATGAGTAAGGATTGCTATGGAGCTCCTCCAC
JMFS089B08+ ACTTCTCCTCCATGAGTAAGGATTGCTATGGAGCTCCTCCAC
JMFS089B01+ ACTTCTCCTCCATGAGTAAGGATTG
JMSF009I19+ ACTTCTCCTCCATGAGTAAGGATTGCTATGGAGCTCCTCCACCGAGATCGTCG
JMSF041L02+ ACTTCTCCTCCATGAGTAAGGATTGCTATGGAGCTCCTCCACCGAGATCGTCGTCTTCCC
____________________________________________________________
consensus ACTTCTCCTCCATGAGTAAGGATTGCTATGGAGCTCCTCCACCGAGATCGTCGTCTTCCC