List of clones in pair P000252.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002H13Sequence491003071 (8)ref|XP_009599355.1|9e-50PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento674005404 (11)gb|AAL16927.1|AF420477_13e-603-hydroxy-3-methylglutaryl CoA reductase, partial [Solanum lycopersicum]
JMFF005J16Sequence471003071 (8)ref|XP_009599355.1|1e-40PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento483005404 (11)gb|AAY22199.1|7e-12HMG CoA reductase, partial [Datura inoxia]
JMFF011F20Sequence428003071 (8)ref|XP_009599355.1|5e-40PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento675005404 (11)gb|AAL16927.1|AF420477_13e-603-hydroxy-3-methylglutaryl CoA reductase, partial [Solanum lycopersicum]
JMFF021A17Sequence713005404 (11)ref|XP_004170310.1|8e-69PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMFF022F12Sequence427003071 (8)ref|XP_009599355.1|5e-40PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento765005404 (11)ref|XP_004170310.1|4e-83PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMFF024A20Sequence421003071 (8)ref|XP_009599355.1|8e-40PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento742005404 (11)ref|XP_004170310.1|3e-76PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMFF038A22Sequence435003071 (8)ref|XP_009599355.1|1e-40PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento685005404 (11)gb|AAL16927.1|AF420477_16e-613-hydroxy-3-methylglutaryl CoA reductase, partial [Solanum lycopersicum]
JMFS028B08Sequence638005404 (11)gb|AAB23278.1|6e-1303-hydroxy-3-methylglutaryl-coenzyme A reductase, HMGR {active site} [tomatoes,
JMFS081C09Sequence627005404 (11)ref|XP_004232593.1|4e-134PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Solanum lycopersi
JMSF034M17Sequence673003071 (8)ref|XP_009599355.1|6e-45PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento698005404 (11)ref|XP_004170310.1|2e-69PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum
JMSF043J23Sequence710003071 (8)ref|XP_009599355.1|2e-59PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Nicotiana tomento734005404 (11)ref|XP_004170310.1|1e-79PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase-like, partial [Cucum

Contig 3071 BLAST Hits against nr-aa DB Show

Contig 5404 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig003071============================================ 714         ============================================Contig005404============================================1421
   8 ----------------------------------------------------------------->JMFF005J16                                                                                                       <---------------------------------rJMFF005J16  
  13  --------------------------------------------------------->JMFF024A20                                                                                            <---------------------------------------------------rJMFF024A20  
  13  ------------------------------------------------------------>JMFF038A22                                                                                             <-----------------------------------------------rJMFF038A22  
  17  ----------------------------------------------------------->JMFF011F20                                                                                             <-----------------------------------------------rJMFF011F20  
  17  ----------------------------------------------------------->JMFF022F12                                                                                       <-----------------------------------------------------rJMFF022F12  
  18  -------------------------------------------------------------------->JMFF002H13                                                                                     <----------------------------------------------rJMFF002H13  
  27  --------------------------------------------------------------------------------------------->JMSF034M17                                                          <------------------------------------------------rJMSF034M17  
  28  -------------------------------------------------------------------------------------------------->JMSF043J23                                                 <---------------------------------------------------rJMSF043J23  

                                                                                                                      ------------------------------------------->JMFS081C09-  
                                                                                                                                                                        <-------------------------------------------------rJMFF021A17- 
                                                                                                                                                      ------------------------------------------->JMFS028B08-