List of clones in pair P000225.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K08Sequence451010697 (12)emb|CDY35861.1|1e-80BnaC09g37930D [Brassica napus]735003178 (11)ref|XP_008384431.1|3e-118PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF013K13Sequence720003178 (11)ref|XP_008384431.1|1e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF022K02Sequence539010697 (12)gb|KJB83376.1|2e-92hypothetical protein B456_013G244600 [Gossypium raimondii]
JMFF024F11Sequence497010697 (12)gb|KJB83376.1|3e-91hypothetical protein B456_013G244600 [Gossypium raimondii]738003178 (11)ref|XP_008384431.1|3e-118PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF025F17Sequence282003178 (11)257003178 (11)
JMFF027B08Sequence525010697 (12)gb|KJB83376.1|1e-91hypothetical protein B456_013G244600 [Gossypium raimondii]722003178 (11)ref|XP_008384431.1|2e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF039G11Sequence583010697 (12)gb|KJB83376.1|8e-102hypothetical protein B456_013G244600 [Gossypium raimondii]719003178 (11)ref|XP_008384431.1|1e-116PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF050H07Sequence630010697 (12)gb|KJB83376.1|6e-113hypothetical protein B456_013G244600 [Gossypium raimondii]520003178 (11)ref|XP_008384431.1|5e-59PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN028B02Sequence565010697 (12)gb|KJB83376.1|2e-107hypothetical protein B456_013G244600 [Gossypium raimondii]
JMSF005E13Sequence411010697 (12)emb|CDY35861.1|7e-74BnaC09g37930D [Brassica napus]483003178 (11)ref|XP_008384431.1|2e-62PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF022O19Sequence631010697 (12)gb|KJB83376.1|1e-102hypothetical protein B456_013G244600 [Gossypium raimondii]759003178 (11)ref|XP_008384431.1|1e-135PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF042F06Sequence741010697 (12)gb|KJB83376.1|8e-131hypothetical protein B456_013G244600 [Gossypium raimondii]791003178 (11)ref|XP_008384431.1|9e-126PREDICTED: tubulin alpha-3 chain-like [Malus domestica]

Contig 10697 BLAST Hits against nr-aa DB Show

Contig 3178 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig010697============================================ 746         ============================================Contig003178============================================ 839
  44  --------------------------------------------------------------------->JMFF027B08                                          <-------------------------------------------------------------------------------------rJMFF027B08  
  57  -------------------------------------------------------------------------------------------------->JMSF042F06   <---------------------------------------------------------------------------------------------rJMSF042F06  
  59      ------------------------------------------------------------------>JMFF024F11                                        <---------------------------------------------------------------------------------------rJMFF024F11  
  66        ----------------------------------------------------------------------------->JMFF050H07                                                       <-------------------------------------------------------------rJMFF050H07  
  66       ----------------------------------------------------------->JMFF012K08                                              <---------------------------------------------------------------------------------------rJMFF012K08  
  70 ------------------------------------------------------------------------------------>JMSF022O19                   <------------------------------------------------------------------------------------------rJMSF022O19  
  83       ----------------------------------------------------------------------------->JMFF039G11                             <-------------------------------------------------------------------------------------rJMFF039G11  
 123         ------------------------------------------------------>JMSF005E13                                                                           <---------------------------------------------------------rJMSF005E13  
                  ----------------------------------------------------------------------->JMFF012P05#                 
                  ----------------------------------------------------------------------->JMFF011E16#                 
             ----------------------------------------------------------------------->JMFF022K02-                      
                          -------------------------------------------------------------------------->JMFN028B02-      
                                                                                                                                <-------------------------------------------------------------------------------------rJMFF013K13- 
                                                                                                                                                                                         -------------------------------->JMFF025F17**
                                                                                                                                                                                         <-----------------------------rJMFF025F17**