Contig 010697:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011E16Sequence589010697 (12)gb|KJB83376.1|8e-108hypothetical protein B456_013G244600 [Gossypium raimondii]741019078ref|XP_008384431.1|5e-100PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF012K08Sequence451010697 (12)emb|CDY35861.1|1e-80BnaC09g37930D [Brassica napus]735003178 (11)ref|XP_008384431.1|3e-118PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF012P05Sequence589010697 (12)gb|KJB83376.1|2e-106hypothetical protein B456_013G244600 [Gossypium raimondii]709023327ref|XP_008384431.1|1e-92PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF022K02Sequence539010697 (12)gb|KJB83376.1|2e-92hypothetical protein B456_013G244600 [Gossypium raimondii]
JMFF024F11Sequence497010697 (12)gb|KJB83376.1|3e-91hypothetical protein B456_013G244600 [Gossypium raimondii]738003178 (11)ref|XP_008384431.1|3e-118PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF027B08Sequence525010697 (12)gb|KJB83376.1|1e-91hypothetical protein B456_013G244600 [Gossypium raimondii]722003178 (11)ref|XP_008384431.1|2e-117PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF039G11Sequence583010697 (12)gb|KJB83376.1|8e-102hypothetical protein B456_013G244600 [Gossypium raimondii]719003178 (11)ref|XP_008384431.1|1e-116PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFF050H07Sequence630010697 (12)gb|KJB83376.1|6e-113hypothetical protein B456_013G244600 [Gossypium raimondii]520003178 (11)ref|XP_008384431.1|5e-59PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMFN028B02Sequence565010697 (12)gb|KJB83376.1|2e-107hypothetical protein B456_013G244600 [Gossypium raimondii]
JMSF005E13Sequence411010697 (12)emb|CDY35861.1|7e-74BnaC09g37930D [Brassica napus]483003178 (11)ref|XP_008384431.1|2e-62PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF022O19Sequence631010697 (12)gb|KJB83376.1|1e-102hypothetical protein B456_013G244600 [Gossypium raimondii]759003178 (11)ref|XP_008384431.1|1e-135PREDICTED: tubulin alpha-3 chain-like [Malus domestica]
JMSF042F06Sequence741010697 (12)gb|KJB83376.1|8e-131hypothetical protein B456_013G244600 [Gossypium raimondii]791003178 (11)ref|XP_008384431.1|9e-126PREDICTED: tubulin alpha-3 chain-like [Malus domestica]

Alignment

This contig is upended


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JMSF042F06+                                             TGCATATGTCATATATTGCTTCATTG
                      ____________________________________________________________
consensus                                               TGCATATGTCATATATTGCTTCATTG
 
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JMFN028B02+             CAAAAGCACAACAACATCTGTGTGTT-TAGGAGGGAATGAGTAGATAAGACGCTGTTG
JMSF042F06+           TCCAAAAGCACAACAACATCTGTGTGTTCTAGGAGGGAATGAGTAGATAAGACGCTGTTG
                      ____________________________________________________________
consensus             TCCAAAAGCACAACAACATCTGTGTGTTCTAGGAGGGAATGAGTAGATAAGACGCTGTTG
 
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JMFF039G11+                                           AGATGGAAATATGGTAAATCCGAGTTTT
JMFF050H07+                                      TGCGGAGATGGAAATATGGTAAATCCGAGTTTG
JMFN028B02+           TATGGCTCAACAACGGCAGTTGATACCTGCGGAGATGGAAATATGGTAAATCCGAGTTTT
JMFF011E16+                                  TACCTGCGGAGATGGAAATATGGTAAATCCGAGTTTT
JMFF012P05+                                  TACCTGCGGAGATGGAAATATGGTAAATCCGAGTTTT
JMSF042F06+           TATGGCTCAACAACGGCAGTTGATACCTGCGGAGATGGAAATATGGTAAATCCGAGTTTT
JMSF022O19+                                        CGGAGATGGAAATATGGTAAATCCGAGTTTT
                      ____________________________________________________________
consensus             TATGGCTCAACAACGGCAGTTGATACCTGCGGAGATGGAAATATGGTAAATCCGAGTTTT
 
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JMFF039G11+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCNTAAACCAGAACCT
JMFF050H07+           ATTTCCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
JMFN028B02+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
JMFF011E16+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
JMFF012P05+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
JMFF022K02+               TCTTTCCATAATNTACAGACAAACGCTCCAGAAGCAAGGATCNTAAACCAGAACCT
JMSF042F06+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
JMSF022O19+           GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
                      ____________________________________________________________
consensus             GATTTCTTTCCATAATCTACAGACAAACGCTCCAGAAGCAAGGATCCTAAACCAGAACCT
 
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JMFF039G11+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF050H07+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFN028B02+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF011E16+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF012P05+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF022K02+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF012K08+                                                           CAATTGTCAGNT
JMFF024F11+                    CCAACAGCATTAAAGACCAGGAATCNTTGCAAACCAGTGCAATTGTCAGCT
JMSF042F06+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMFF027B08+                         AGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
JMSF022O19+           GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
                      ____________________________________________________________
consensus             GTGCCACCACCAACAGCATTAAAGACCAGGAATCCTTGCAAACCAGTGCAATTGTCAGCT
 
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JMFF039G11+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF050H07+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFN028B02+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF011E16+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF012P05+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF022K02+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF012K08+           AATTTTCTCACTNTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMSF005E13+                    ACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF024F11+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMSF042F06+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMFF027B08+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
JMSF022O19+           AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
                      ____________________________________________________________
consensus             AATTTTCTCACTCTATCAAGGCACAGATCAACAATATCTTTCCCCACTGTATAATGTCCT
 
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JMFF039G11+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF050H07+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFN028B02+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF011E16+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF012P05+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF022K02+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF012K08+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMSF005E13+           CTCGCAAAGTTGTNGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF024F11+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMSF042F06+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMFF027B08+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
JMSF022O19+           CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
                      ____________________________________________________________
consensus             CTCGCAAAGTTGTTGGCTGCATCCTCCTTACCAGATATAAGTTGCTCGGGATGAAACAGT
 
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JMFF039G11+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF050H07+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFN028B02+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF011E16+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF012P05+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF022K02+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF012K08+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMSF005E13+           NGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF024F11+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMSF042F06+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMFF027B08+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
JMSF022O19+           TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
                      ____________________________________________________________
consensus             TGTCTGTATGCCCCACTTCTCACTTCATCCACAACAGTAGGCTCAAGATCAACAAATACA
 
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JMFF039G11+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF050H07+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFN028B02+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF011E16+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF012P05+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF022K02+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF012K08+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMSF005E13+           GCTNTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF024F11+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMSF042F06+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMFF027B08+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
JMSF022O19+           GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
                      ____________________________________________________________
consensus             GCTCTAGGCACATGTTTGCCTGAACCAGTTTCACTAAAGAAGGTGTTGAAAGAATCATTT
 
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JMFF039G11+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF050H07+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFN028B02+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF011E16+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF012P05+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF022K02+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF012K08+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMSF005E13+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF024F11+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMSF042F06+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMFF027B08+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
JMSF022O19+           GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
                      ____________________________________________________________
consensus             GCAATACCAACTGATGTGTCACTAGGCATCATGCCGTCGGGTTGAATGCCATGCTCAAGG
 
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JMFF039G11+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF050H07+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFN028B02+           CAATAGAGCTCCCAGCAGGCATT                                     
JMFF011E16+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF012P05+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF022K02+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF012K08+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMSF005E13+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF024F11+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMSF042F06+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMFF027B08+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
JMSF022O19+           CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
                      ____________________________________________________________
consensus             CAATAGAGCTCCCAGCAGGCATTGCCGACCTGAATTCCGGCCTGGCCGATATGTACGCTG
 
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JMFF039G11+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMFF050H07+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMFF011E16+           ATGATCTCTCTCATCTCTCTCTC                                     
JMFF012P05+           ATGATCTCTCTCATCTCTCTCTC                                     
JMFF022K02+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGAAG
JMFF012K08+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMSF005E13+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGAC 
JMFF024F11+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMSF042F06+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMFF027B08+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
JMSF022O19+           ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
                      ____________________________________________________________
consensus             ATGATCTCTCTCATCTCTCTCTCTCTCTCTCTCTTTCTGCTGAGACCGAATTTGCAGACG
 
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JMFF039G11+           GATCGAGAGAGATTT                                             
JMFF050H07+           GATCGA                                                      
JMFF022K02+           GAT                                                         
JMFF012K08+           GATCGAGAGAGATTTGGAT                                         
JMFF024F11+           GATCGAGAGAGATTTGGATACAGGAT                                  
JMSF042F06+           GATCGAGAGAGATTTGGATACTGGATAGATACTATAAGTCTATAATATATCTT       
JMFF027B08+           GATCGAGAGAGATTTGGATACTGGATAGATACTATAAGTCTATAATATATCTT       
JMSF022O19+           GATCGAGAGAGATTTGGATACTGGATAGATACTATAAGTCTATAATATATCTTTAAACCC
                      ____________________________________________________________
consensus             GATCGAGAGAGATTTGGATACTGGATAGATACTATAAGTCTATAATATATCTTTAAACCC