clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF009H02 | Sequence | 588 | 011495 (12) | ref|XP_009601868.1| | 213 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 775 | 011495 (12) | emb|CDP03968.1| | 1e-36 | unnamed protein product [Coffea canephora] |
JMFF010N22 | Sequence | 537 | 011495 (12) | ref|XP_009601868.1| | 181 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | |||||
JMFF034I23 | Sequence | 525 | 011495 (12) | ref|XP_009601868.1| | 177 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 714 | 011495 (12) | ref|XP_009601868.1| | 102 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] |
JMFF038B12 | Sequence | 497 | 011495 (12) | emb|CDP03968.1| | 1e-56 | unnamed protein product [Coffea canephora] | 754 | 011495 (12) | ref|XP_009601868.1| | 130 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] |
JMFF043E08 | Sequence | 629 | 011495 (12) | ref|XP_009601868.1| | 224 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 455 | 011495 (12) | |||
JMFF051H20 | Sequence | 469 | 011495 (12) | ref|XP_009601868.1| | 139 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 349 | 011495 (12) | |||
JMFN003A12 | Sequence | 624 | 011495 (12) | ref|XP_009601868.1| | 57.4 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011495============================================1170 1 --------------------------------------->JMFF051H20 <-----------------------------rJMFF051H20 37 ---------------------------------------------------->JMFF043E08 <--------------------------------------rJMFF043E08 45 ----------------------------------------->JMFF038B12 <--------------------------------------------------------------rJMFF038B12 45 ------------------------------------------->JMFF034I23 <----------------------------------------------------------rJMFF034I23 49 ------------------------------------------------->JMFF009H02 <----------------------------------------------------------------rJMFF009H02
The following clones don't have the opposite end in this pair.
--------------------------------------------->JMFF010N22- ---------------------------------------------------->JMFN003A12-