| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009H02 | Sequence | 588 | 011495 (12) | ref|XP_009601868.1| | 213 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 775 | 011495 (12) | emb|CDP03968.1| | 1e-36 | unnamed protein product [Coffea canephora] |
| JMFF010N22 | Sequence | 537 | 011495 (12) | ref|XP_009601868.1| | 181 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | |||||
| JMFF034I23 | Sequence | 525 | 011495 (12) | ref|XP_009601868.1| | 177 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 714 | 011495 (12) | ref|XP_009601868.1| | 102 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] |
| JMFF038B12 | Sequence | 497 | 011495 (12) | emb|CDP03968.1| | 1e-56 | unnamed protein product [Coffea canephora] | 754 | 011495 (12) | ref|XP_009601868.1| | 130 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] |
| JMFF043E08 | Sequence | 629 | 011495 (12) | ref|XP_009601868.1| | 224 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 455 | 011495 (12) | |||
| JMFF051H20 | Sequence | 469 | 011495 (12) | ref|XP_009601868.1| | 139 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | 349 | 011495 (12) | |||
| JMFN003A12 | Sequence | 624 | 011495 (12) | ref|XP_009601868.1| | 57.4 | PREDICTED: uncharacterized protein LOC104097065 [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF051H20- AAACCAAATTGATGTTTTTCTTTATTTCA
rJMFF043E08- AAAACCAAATTGATGTTTTTCTTTATTTCA
____________________________________________________________
consensus AAAACCAAATTGATGTTTTTCTTTATTTCA
. : . : . : . : . : . :
rJMFF051H20- ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
rJMFF043E08- ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
rJMFF034I23- ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
JMFN003A12+ ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
rJMFF038B12- ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
rJMFF009H02- ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
____________________________________________________________
consensus ATAACTATATCTTCTTCCTCAACTACAAAAGGGTAATCCATTAACAACCACATTATGTCC
. : . : . : . : . : . :
rJMFF051H20- ATATACAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
rJMFF043E08- ATATTTAACAAATAAAACAAAAAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
rJMFF034I23- ATATTTAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
JMFN003A12+ ATATTTAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
rJMFF038B12- ATATTTAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
rJMFF009H02- ATATTTAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
____________________________________________________________
consensus ATATTTAACAAATAAAACAAAGAAACAAACCTCTTTTTTTTGTTCTGCAAATTTACCAAC
. : . : . : . : . : . :
rJMFF051H20- TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
rJMFF043E08- TGATCACTTTACTCAAATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
rJMFF034I23- TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
JMFN003A12+ TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
rJMFF038B12- TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
rJMFF009H02- TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
____________________________________________________________
consensus TGATCACTTTACTCAGATGTCCTTGTTTTCACTATCTCCCCTGCCTCTCCATGCACTACA
. : . : . : . : . : . :
rJMFF051H20- ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
rJMFF043E08- ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
rJMFF034I23- ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
JMFN003A12+ ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
rJMFF038B12- ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
rJMFF009H02- ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
____________________________________________________________
consensus ACACACTACATGACTCTGGCATTTCCCTTCCATTCACATTCTCCCCCTTTCTGTTTCATT
. : . : . : . : . : . :
rJMFF051H20- CATTGGGGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
rJMFF043E08- CATTGGGGACAACAATCTTGAAAACTCGAGCCGGCATATGACTACTTTGCAAACTATGCA
rJMFF034I23- CATTGGTGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
JMFN003A12+ CATTGGTGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
rJMFF038B12- CATTGGTGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
rJMFF009H02- CATTGGTGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
____________________________________________________________
consensus CATTGGTGACAACAATCTTGAAGACTCGAGCCGGCATATGACTACTTTGCAGACTATGCA
. : . : . : . : . : . :
rJMFF051H20- CTATACACAAAAACCACAAG
rJMFF043E08- CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCGTATGGACCTGCTAAA
rJMFF034I23- CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCATATGGACCTGCTAAA
JMFN003A12+ CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCGTATGGACCTGCTAAA
rJMFF038B12- CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCGTATGGACCTGCTAAA
rJMFF009H02- CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCGTATGGACCTGCTAAA
____________________________________________________________
consensus CTATACACAAAAACCACAAGCAAGCAAGCACACCCAAATGCAGCGTATGGACCTGCTAAA
. : . : . : . : . : . :
rJMFF043E08- CCTGAACTTCTGCCAAACAAGTAGAAACAAGGAATAACAGAAAAACCATTGACTCAAAAC
rJMFF034I23- CCTGAACTTCTGCCAGACAAGTAGAAACAAGGAATAACAGAAGAACCATTGACTCAGAAC
JMFN003A12+ CCTGAACTTCTGCCAGACAAGTAGAAACAAGGAATAACAGAAGAACCATTGACTCAGAAC
rJMFF038B12- CCTGAACTTCTGCCAGACAAGTAGAAACAAGGAATAACAGAAGAACCATTGACTCAGAAC
rJMFF009H02- CCTGAACTTCTGCCAGACAAGTAGAAACAAGGAATAACAGAAGAACCATTGACTCAGAAC
____________________________________________________________
consensus CCTGAACTTCTGCCAGACAAGTAGAAACAAGGAATAACAGAAGAACCATTGACTCAGAAC
. : . : . : . : . : . :
rJMFF043E08- TGAGC
rJMFF034I23- TGAGCTATTGTGAAATTTGAACTATCCCCATCTCTGAATTCTACAAAACCGCCCTGCTAC
JMFN003A12+ TGAGCTATTGTGAAATTTGAACTATCCCCATCTCTGAATTCTACAAAACCGCCCTGCTAC
rJMFF038B12- TGAGCTATTGTGAAATTTGAACTATCCCCATCTCTGAATTCTACAAAACCGCCCTGCTAC
rJMFF009H02- TGAGCTATTGTGAAATTTGAACTATCCCCATCTCTGAATTCTACAAAACCGCCCTGCTAC
____________________________________________________________
consensus TGAGCTATTGTGAAATTTGAACTATCCCCATCTCTGAATTCTACAAAACCGCCCTGCTAC
. : . : . : . : . : . :
rJMFF034I23- TATCTGTGTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
JMFN003A12+ TATCTGTGTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
rJMFF038B12- TATCTGTGTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
rJMFF009H02- TATCTGTGTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
JMFF043E08+ GTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
JMFF009H02+ GAAGCAG
____________________________________________________________
consensus TATCTGTGTGTTCAACCTTGTATTGGAGCTCCCCAACCCCAAATGTATTCTTTGAAGCAG
. : . : . : . : . : . :
rJMFF034I23- ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
JMFN003A12+ ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
rJMFF038B12- ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
rJMFF009H02- ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
JMFF043E08+ ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
JMFF009H02+ ATTCCGNTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
____________________________________________________________
consensus ATTCCGCTATGTGCTGCCCATCCCCGAGATCAGTAAGCTGAACAGCAACACAATCTCTGG
. : . : . : . : . : . :
rJMFF034I23- GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
JMFN003A12+ GAGTCTCGAAGGAGGACAAA
rJMFF038B12- GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
rJMFF009H02- GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
JMFF043E08+ GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
JMFF009H02+ GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
JMFF034I23+ TCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
JMFF038B12+ CACCACGCCAACATCGAAGTAAATCA
JMFF010N22+ TCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
____________________________________________________________
consensus GAGTCTCGAAGGAGGACAAAGAGAACTGCTTGGACACCACGCCAACATCGAAGTAAATCA
. : . : . : . : . : . :
rJMFF034I23- ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAA
rJMFF038B12- ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
rJMFF009H02- ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF043E08+ ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF009H02+ ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF034I23+ ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF038B12+ ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF051H20+ GGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
JMFF010N22+ ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
____________________________________________________________
consensus ACCCGGAGCTGGGCACATCGACCCGGATTTCCTTAACCGGGAACCACAGGAACAAATCCT
. : . : . : . : . : . :
rJMFF038B12- GCGCCGAAATCCCGGAC
rJMFF009H02- GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTA
JMFF043E08+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
JMFF009H02+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
JMFF034I23+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
JMFF038B12+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACTCGTAACTGAGAGTCCCGGAAACGTTCA
JMFF051H20+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
JMFF010N22+ GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
____________________________________________________________
consensus GCGCCGAAATCCCGGACAGCCCGCCGATCAACCCGTAACTGAGAGTCCCGGAAACGTTCA
. : . : . : . : . : . :
JMFF043E08+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
JMFF009H02+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
JMFF034I23+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
JMFF038B12+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
JMFF051H20+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
JMFF010N22+ TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
____________________________________________________________
consensus TATCGTAGTGAATTTCGTTCTCGAACTTGGCATTACAGGCCTGATCCAAATGGACAACGA
. : . : . : . : . : . :
JMFF043E08+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
JMFF009H02+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
JMFF034I23+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
JMFF038B12+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
JMFF051H20+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
JMFF010N22+ ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
____________________________________________________________
consensus ATTTGCCGGAGTTGTCGAGCGTGAAGTTCGTCACCCCCTTCGGCAGCAGCCCCATGGGCA
. : . : . : . : . : . :
JMFF043E08+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
JMFF009H02+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
JMFF034I23+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
JMFF038B12+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
JMFF051H20+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
JMFF010N22+ GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
____________________________________________________________
consensus GCCCGTGGGCCTTCAGCACCTCGTATATAGACGACTCGCACACCGCTAAACACGAGAGAC
. : . : . : . : . : . :
JMFF043E08+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
JMFF009H02+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
JMFF034I23+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
JMFF038B12+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
JMFF051H20+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
JMFF010N22+ AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
____________________________________________________________
consensus AGCACAGGAGAACGGAGAGGCACAGACCCAAACCCGCGGGAAGGTGGAGTGACGTGGGCA
. : . : . : . : . : . :
JMFF043E08+ GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
JMFF009H02+ GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
JMFF034I23+ GCATGGTTTTTGTCTCGGGTC-GGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
JMFF038B12+ GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
JMFF051H20+ GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
JMFF010N22+ GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
____________________________________________________________
consensus GCATGGTTTTTGTCTCGGGTCGGGTCAAAACATAGGAGTTCTTTGGGGGTGGTGGTTTAG
. : . : . : . : . : . :
JMFF043E08+ AGAGAGAAAATCAAGGCTAGGGTT
JMFF009H02+ AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAG
JMFF034I23+ AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAGAGAG
JMFF038B12+ AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAGAGAG
JMFF051H20+ AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAGAGAGAAAAATGGCTACAAC
JMFF010N22+ AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAGAGAGAAAAATGGCTACAAC
____________________________________________________________
consensus AGAGAGAAAATCAAGGCTAGGGTTTAAGAAGAGTTGAAGAGAGAGAAAAATGGCTACAAC