| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF022E11 | Sequence | 532 | 005281 (10) | ref|XP_007035513.1| | 7e-17 | RING/U-box superfamily protein, putative isoform 2 [Theobroma cacao] gb|EOY0643 | 755 | 005281 (10) | |||
| JMFF042N13 | Sequence | 645 | 005281 (10) | ref|XP_004241072.1| | 5e-18 | PREDICTED: E3 ubiquitin-protein ligase Topors [Solanum lycopersicum] | 598 | 005281 (10) | |||
| JMSF035M04 | Sequence | 679 | 005281 (10) | ref|XP_009802830.1| | 1e-28 | PREDICTED: E3 ubiquitin-protein ligase Topors isoform X3 [Nicotiana sylvestris] | 718 | 005281 (10) | |||
| JMSF046F21 | Sequence | 749 | 005281 (10) | ref|XP_006356698.1| | 1e-34 | PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum tuberosum] | 777 | 005281 (10) | ref|XP_009802828.1| | 8e-25 | PREDICTED: E3 ubiquitin-protein ligase Topors isoform X1 [Nicotiana sylvestris] |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig005281============================================1760 83 ------------------------------------->JMSF035M04 <----------------------------------------rJMSF035M04 137 ------------------------->JMFF042N13 <---------------------------------rJMFF042N13 174 ------------------->JMFF022E11 <------------------------------------------rJMFF022E11 199 ------------------------------------------>JMSF046F21 <-------------------------------------------rJMSF046F21
The following clones don't have the opposite end in this pair.
------>JMSF006A20# <------------------------------------rJMSF026K21#