| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF001L22 | Sequence | 561 | 001547 (14) | ref|XP_009787811.1| | 9e-60 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | 530 | 001547 (14) | ref|XP_009787811.1| | 6e-60 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana |
| JMFN003M13 | Sequence | 606 | 001547 (14) | ref|XP_009787811.1| | 1e-59 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | |||||
| JMFN016I11 | Sequence | 523 | 001547 (14) | gb|EYU19142.1| | 5e-60 | hypothetical protein MIMGU_mgv1a016210mg [Erythranthe guttata] | |||||
| JMFN018O07 | Sequence | 544 | 001547 (14) | ref|XP_009787811.1| | 8e-60 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | |||||
| JMFN028J16 | Sequence | 614 | 001547 (14) | ref|XP_009787811.1| | 2e-59 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | |||||
| JMFN032P20 | Sequence | 518 | 001547 (14) | ref|XP_011096659.1| | 1e-43 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Sesamum i | |||||
| JMFN036P22 | Sequence | 484 | 001547 (14) | gb|EYU19142.1| | 5e-54 | hypothetical protein MIMGU_mgv1a016210mg [Erythranthe guttata] | |||||
| JMFN038G10 | Sequence | 341 | 001547 (14) | pdb|3LW5|K | 6e-34 | Chain K, Improved Model Of Plant Photosystem I | |||||
| JMFN038I14 | Sequence | 493 | 001547 (14) | ref|XP_009787811.1| | 2e-58 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | |||||
| JMSF008I15 | Sequence | 329 | 001547 (14) | ref|XP_009622475.1| | 4e-32 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | 566 | 001547 (14) | ref|XP_009787811.1| | 1e-59 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana |
| JMSF053K21 | Sequence | 551 | 001547 (14) | ref|XP_009787811.1| | 6e-47 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana | 516 | 001547 (14) | ref|XP_009787811.1| | 4e-47 | PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Nicotiana |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig001547============================================ 652 121 ------------------------------------------------------------------------------------>JMFF001L22 <--------------------------------------------------------------------------------rJMFF001L22 144 ---------------------------------------------------------------------------------->JMSF053K21 <-----------------------------------------------------------------------------rJMSF053K21 280 -------------------->JMSF008I15 <--------------------------------------------------------rJMSF008I15
The following clones don't have the opposite end in this pair.
--------------------------------------------------->JMFN038G10- --------------------------------------------------------------------------------------------->JMFN028J16- --------------------------------------------------------------------------->JMFN038I14- ------------------------------------------------------------------------->JMFN036P22- <--------------------------------------------------------------------------JMFN016I11- -------------------------------------------------------------------------------------------->JMFN003M13- ---------------------------------------------------------------------------------->JMFN018O07- ------------------------------------------------------------------------------>JMFN032P20-