clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF003O22 | Sequence | 548 | 010891 (10) | ref|XP_004252368.1| | 5e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 707 | 010891 (10) | ref|XP_004252368.1| | 4e-67 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
JMFF020G19 | Sequence | 553 | 010891 (10) | ref|XP_004252368.1| | 5e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 704 | 010891 (10) | ref|XP_004252368.1| | 3e-67 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
JMFF036L06 | Sequence | 593 | 010891 (10) | ref|XP_004252368.1| | 8e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | |||||
JMSF021I08 | Sequence | 695 | 010891 (10) | ref|XP_004252368.1| | 2e-61 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | |||||
JMSF037C18 | Sequence | 691 | 010891 (10) | ref|XP_004252368.1| | 3e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 723 | 010891 (10) | ref|XP_004252368.1| | 3e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
JMSF046F09 | Sequence | 746 | 010891 (10) | ref|XP_004252368.1| | 2e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 703 | 010891 (10) | ref|XP_004252368.1| | 1e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010891============================================ 790 10 -------------------------------------------------------------------------------------->JMSF037C18 <------------------------------------------------------------------------------------------rJMSF037C18 71 -------------------------------------------------------------------->JMFF003O22 <----------------------------------------------------------------------------------------rJMFF003O22 71 --------------------------------------------------------------------->JMFF020G19 <----------------------------------------------------------------------------------------rJMFF020G19 96 --------------------------------------------------------------------------------------------->JMSF046F09 <---------------------------------------------------------------------------------------rJMSF046F09
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------->JMFF036L06- <--------------------------------------------------------------------------------------rJMSF021I08-