| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003O22 | Sequence | 548 | 010891 (10) | ref|XP_004252368.1| | 5e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 707 | 010891 (10) | ref|XP_004252368.1| | 4e-67 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
| JMFF020G19 | Sequence | 553 | 010891 (10) | ref|XP_004252368.1| | 5e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 704 | 010891 (10) | ref|XP_004252368.1| | 3e-67 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
| JMFF036L06 | Sequence | 593 | 010891 (10) | ref|XP_004252368.1| | 8e-68 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | |||||
| JMSF021I08 | Sequence | 695 | 010891 (10) | ref|XP_004252368.1| | 2e-61 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | |||||
| JMSF037C18 | Sequence | 691 | 010891 (10) | ref|XP_004252368.1| | 3e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 723 | 010891 (10) | ref|XP_004252368.1| | 3e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
| JMSF046F09 | Sequence | 746 | 010891 (10) | ref|XP_004252368.1| | 2e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] | 703 | 010891 (10) | ref|XP_004252368.1| | 1e-66 | PREDICTED: 60S ribosomal protein L28-1 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF037C18- GACTAGGGTT
____________________________________________________________
consensus GACTAGGGTT
. : . : . : . : . : . :
JMSF037C18- TTAATATATAAACAAAATAAACCTCAAATATTGCCAACTTTTTCCCTCCCCATCGCCCGT
JMFF020G19- AACTTTTTCCCTCCCCATCGCCCGT
JMFF036L06- AACTTTTTCCCTCCCCATCGCCCGT
JMFF003O22- AACTTTTTCCCTCCCCATCGCCCGT
rJMSF046F09+ AACTTTTTCCCTCCCCATCGCCCGT
rJMSF037C18+ CATCGCCCGT
rJMFF020G19+ CATCGCCCGT
rJMFF003O22+ CCCATCGCCCGT
rJMSF021I08+ CCTCCCCATCGCCCGT
JMSF046F09- AACTTTTTCCCTCCCCATCGCCCGT
____________________________________________________________
consensus TTAATATATAAACAAAATAAACCTCAAATATTGCCAACTTTTTCCCTCCCCATCGCCCGT
. : . : . : . : . : . :
JMSF037C18- CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
JMFF020G19- CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
JMFF036L06- CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
JMFF003O22- CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
rJMSF046F09+ CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
rJMSF037C18+ CGGAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
rJMFF020G19+ CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
rJMFF003O22+ CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
rJMSF021I08+ CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
JMSF046F09- CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
____________________________________________________________
consensus CGAAGCTTGGATTTTGCTTCTGCGCGACTTGCAGCAATGGCAACGGTGCCGGGGCAGCTG
. : . : . : . : . : . :
JMSF037C18- GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
JMFF020G19- GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
JMFF036L06- GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
JMFF003O22- GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
rJMSF046F09+ GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
rJMSF037C18+ GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
rJMFF020G19+ GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
rJMFF003O22+ GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
rJMSF021I08+ GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
JMSF046F09- GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
____________________________________________________________
consensus GTGTGGGAGATCGTGAAGAAGAATAACTCTTTCTTGGTCAAGGAGTTCGGCAACGGTACT
. : . : . : . : . : . :
JMSF037C18- GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
JMFF020G19- GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
JMFF036L06- GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
JMFF003O22- GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
rJMSF046F09+ GCCGGTGTCGTCTTCAGCAAAGATCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
rJMSF037C18+ GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
rJMFF020G19+ GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
rJMFF003O22+ GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
rJMSF021I08+ GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
JMSF046F09- GCCGGTGTCGTCTTCAGCAAAGATCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
____________________________________________________________
consensus GCCGGTGTCGTCTTCAGCAAAGAGCCCAACAATCTCTGCAATCTTCATTCTTACAAGCAC
. : . : . : . : . : . :
JMSF037C18- TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
JMFF020G19- TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
JMFF036L06- TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
JMFF003O22- TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
rJMSF046F09+ TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
rJMSF037C18+ TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
rJMFF020G19+ TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
rJMFF003O22+ TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
rJMSF021I08+ TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGNTG
JMSF046F09- TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
____________________________________________________________
consensus TCTGGGTTAGCCAACAAGAAAACTGTGACAATTCAAGGGGGTAAAGATCAGTCTGTGCTG
. : . : . : . : . : . :
JMSF037C18- CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATTTGTC
JMFF020G19- CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
JMFF036L06- CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
JMFF003O22- CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
rJMSF046F09+ CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
rJMSF037C18+ CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATTTGTC
rJMFF020G19+ CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
rJMFF003O22+ CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
rJMSF021I08+ CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGNTAATTTGCACAACAAATCTGTC
JMSF046F09- CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
____________________________________________________________
consensus CTCGCCACAACCAAGACCAAGAAGCAGAATAAGCCAGCTAATTTGCACAACAAATCTGTC
. : . : . : . : . : . :
JMSF037C18- ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
JMFF020G19- ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
JMFF036L06- ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
JMFF003O22- ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
rJMSF046F09+ ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
rJMSF037C18+ ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
rJMFF020G19+ ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
rJMFF003O22+ ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
rJMSF021I08+ ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
JMSF046F09- ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
____________________________________________________________
consensus ATGAAGAAAGAGTTCAGACGCATGGCCAAGGCAGTTACCAATCAGGTTGCAGATAACTAT
. : . : . : . : . : . :
JMSF037C18- TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
JMFF020G19- TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
JMFF036L06- TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
JMFF003O22- TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
rJMSF046F09+ TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
rJMSF037C18+ TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
rJMFF020G19+ TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
rJMFF003O22+ TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
rJMSF021I08+ TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
JMSF046F09- TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
____________________________________________________________
consensus TACAGGCCAACTTGAAGAAGGCAGCCCTTGCTAGGTTGAGTGTTGTGAACAGGAGCCTTA
. : . : . : . : . : . :
JMSF037C18- AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
JMFF020G19- AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
JMFF036L06- AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
JMFF003O22- AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
rJMSF046F09+ AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
rJMSF037C18+ AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
rJMFF020G19+ AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
rJMFF003O22+ AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
rJMSF021I08+ AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCANTGATACTTG
JMSF046F09- AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
____________________________________________________________
consensus AGATTGCAAAATCTGGTGTCAAGAAGAGAAACAGACAAGCTGTATGAGCACTGATACTTG
. : . : . : . : . : . :
JMSF037C18- TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
JMFF020G19- TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTT
JMFF036L06- TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
JMFF003O22- TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTG
rJMSF046F09+ TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
rJMSF037C18+ TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
rJMFF020G19+ TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
rJMFF003O22+ TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
rJMSF021I08+ TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
JMSF046F09- TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
____________________________________________________________
consensus TTCGATGTCATAATCTCAACTGGATTTTGAAATTTTCTTTTTGTTTTTCATAAGTTTTTG
. : . : . : . : . : . :
JMSF037C18- GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
JMFF036L06- GCAGTGGAGTGATTGATACACATTTTCC
rJMSF046F09+ GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
rJMSF037C18+ GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
rJMFF020G19+ GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
rJMFF003O22+ GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
rJMSF021I08+ GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAANT
JMSF046F09- GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
____________________________________________________________
consensus GCAGTGGAGTGATTGATACACATTTTCCATAAAGAAATTAAGATTATAGCTGGGAAAATT
. : . : . : . : . : . :
JMSF037C18- ACCTTGTCCTTTTCTTTTCAG
rJMSF046F09+ ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
rJMSF037C18+ ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
rJMFF020G19+ ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
rJMFF003O22+ ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
rJMSF021I08+ ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
JMSF046F09- ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
____________________________________________________________
consensus ACCTTGTCCTTTTCTTTTCAGTTGTTGTGGGTCTGCACACTTCAGTAGCTTAATTTCAAT
. : . : . : . : . : . :
rJMSF046F09+ TTATGCCTT
rJMSF037C18+ TTATGCCTTTAAAGTTGAACTTGTGTTTAATATATTGTTCATCCTTTTGCA
rJMFF020G19+ TTATGCCTTTAAAGTTGAACTTGTGTTTAATATA
rJMFF003O22+ TTATGCCTTTAAAGTTGAACTTGTGTTTAATATA
rJMSF021I08+ NTATGCCTT
JMSF046F09- TTATGCCTTTAAAGTTGAACTTGTGTTTAATATATTGTTCATCCTTTTGCAAAAAAAAAA
____________________________________________________________
consensus TTATGCCTTTAAAGTTGAACTTGTGTTTAATATATTGTTCATCCTTTTGCAAAAAAAAAA