List of clones in pair P018094.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H16Sequence574001130 (19)ref|XP_004230234.1|2e-63PREDICTED: 40S ribosomal protein S10-like [Solanum lycopersicum]449001130 (19)
JMFF014N02Sequence564001130 (19)ref|XP_009622354.1|2e-63PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]723001130 (19)gb|KJB34126.1|6e-55hypothetical protein B456_006G051300 [Gossypium raimondii]
JMFF022H11Sequence753001130 (19)ref|XP_009622354.1|4e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMFF022N05Sequence461001130 (19)ref|XP_009622354.1|3e-65PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]739001130 (19)ref|XP_009622354.1|5e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMFF029H18Sequence545001130 (19)emb|CDP05140.1|1e-63unnamed protein product [Coffea canephora]764001130 (19)ref|XP_009622354.1|2e-58PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMSF025A04Sequence658001130 (19)ref|XP_009622354.1|5e-63PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]719001130 (19)ref|XP_009622354.1|4e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMSF038B06Sequence630001130 (19)ref|XP_009622354.1|2e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMSF038C06Sequence663001130 (19)ref|XP_009622354.1|5e-63PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]768001130 (19)ref|XP_009622354.1|2e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMSF039L15Sequence695001130 (19)ref|XP_009622354.1|8e-63PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]797001130 (19)ref|XP_009622354.1|2e-62PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]
JMSF043B14Sequence489001130 (19)ref|XP_009622354.1|1e-67PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis]642001130 (19)ref|XP_004230234.1|7e-49PREDICTED: 40S ribosomal protein S10-like [Solanum lycopersicum]

Contig 1130 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig001130============================================ 823         
   4  ----------------------------------------------------------------->JMFF029H18                                    
            <--------------------------------------------------------------------------------------------rJMFF029H18  
  23 ------------------------------------------------------------------------------------>JMSF039L15                  
     <------------------------------------------------------------------------------------------------rJMSF039L15  
  38 ----------------------------------------------------->JMFF022N05                                                 
          <-----------------------------------------------------------------------------------------rJMFF022N05  
  38 --------------------------------------------------------------------->JMFF008H16                                 
                                             <------------------------------------------------------rJMFF008H16  
  46  -------------------------------------------------------------------->JMFF014N02                                 
            <---------------------------------------------------------------------------------------rJMFF014N02  
  52 -------------------------------------------------------------------------------->JMSF038C06                      
     <---------------------------------------------------------------------------------------------rJMSF038C06  
  57 ------------------------------------------------------------------------------->JMSF025A04                       
          <---------------------------------------------------------------------------------------rJMSF025A04  
  61 ----------------------------------------------------------->JMSF043B14                                           
                    <-----------------------------------------------------------------------------rJMSF043B14

The following clones don't have the opposite end in this pair.

         <------------------------------rJMSF038P23*                                                                  
     ---------------------------------------------------------------------------->JMSF038B06-                         
        <-------------------------------------------------------------------------------------------rJMFF022H11-