| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008H16 | Sequence | 574 | 001130 (19) | ref|XP_004230234.1| | 2e-63 | PREDICTED: 40S ribosomal protein S10-like [Solanum lycopersicum] | 449 | 001130 (19) | |||
| JMFF014N02 | Sequence | 564 | 001130 (19) | ref|XP_009622354.1| | 2e-63 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 723 | 001130 (19) | gb|KJB34126.1| | 6e-55 | hypothetical protein B456_006G051300 [Gossypium raimondii] |
| JMFF022H11 | Sequence | 753 | 001130 (19) | ref|XP_009622354.1| | 4e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | |||||
| JMFF022N05 | Sequence | 461 | 001130 (19) | ref|XP_009622354.1| | 3e-65 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 739 | 001130 (19) | ref|XP_009622354.1| | 5e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] |
| JMFF029H18 | Sequence | 545 | 001130 (19) | emb|CDP05140.1| | 1e-63 | unnamed protein product [Coffea canephora] | 764 | 001130 (19) | ref|XP_009622354.1| | 2e-58 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] |
| JMSF025A04 | Sequence | 658 | 001130 (19) | ref|XP_009622354.1| | 5e-63 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 719 | 001130 (19) | ref|XP_009622354.1| | 4e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] |
| JMSF038B06 | Sequence | 630 | 001130 (19) | ref|XP_009622354.1| | 2e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | |||||
| JMSF038C06 | Sequence | 663 | 001130 (19) | ref|XP_009622354.1| | 5e-63 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 768 | 001130 (19) | ref|XP_009622354.1| | 2e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] |
| JMSF038P23 | Sequence | 655 | 006518 (5) | ref|XP_006338492.1| | 8e-51 | PREDICTED: xylosyltransferase 1-like [Solanum tuberosum] | 256 | 001130 (19) | gb|KJB34129.1| | 5e-42 | hypothetical protein B456_006G051300, partial [Gossypium raimondii] |
| JMSF039L15 | Sequence | 695 | 001130 (19) | ref|XP_009622354.1| | 8e-63 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 797 | 001130 (19) | ref|XP_009622354.1| | 2e-62 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] |
| JMSF043B14 | Sequence | 489 | 001130 (19) | ref|XP_009622354.1| | 1e-67 | PREDICTED: 40S ribosomal protein S10-1-like [Nicotiana tomentosiformis] | 642 | 001130 (19) | ref|XP_004230234.1| | 7e-49 | PREDICTED: 40S ribosomal protein S10-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMSF039L15- GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMSF038C06- GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMSF025A04- GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMSF038B06- GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMFF008H16- AGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMFF029H18- TTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMFF014N02- AGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMSF043B14- GATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
JMFF022N05- AGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
rJMSF038P23+ TTTCCTTTC
rJMSF038C06+ GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
rJMFF022H11+ GGAGGCTTTCCTTTC
rJMSF039L15+ GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
____________________________________________________________
consensus GAGATTCAGCTCAGCTGCTACACTCGTCGGAGGCTTTCCTTTC
. : . : . : . : . : . :
rJMSF025A04+ CCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMSF039L15- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMSF038C06- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMSF025A04- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMSF038B06- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMFF008H16- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMFF029H18- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMFF014N02- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMSF043B14- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
JMFF022N05- TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMSF038P23+ TCCNCAACCGGCAAAAGCAGCCATGATTATNTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMSF038C06+ TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMFF022N05+ TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMFF022H11+ TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMFF014N02+ AGCAGCCATGATTATTTCAGAGAAGAACCCGGAGAGAGATCTGCA
rJMSF039L15+ TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
rJMFF029H18+ AAAAGCAGCCATGATTATTTCAGAGAAG-ACCNGGAGAGAGATCTGCA
____________________________________________________________
consensus TCCCCAACCGGCAAAAGCAGCCATGATTATTTCAGAGAAG-AACCGGAGAGAGATCTGCA
. : . : . : . : . : . :
rJMSF025A04+ AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMSF039L15- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMSF038C06- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMSF025A04- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMSF038B06- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMFF008H16- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMFF029H18- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMFF014N02- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMSF043B14- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
JMFF022N05- AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMSF038P23+ AGTACGTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMSF038C06+ AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMFF022N05+ AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMFF022H11+ AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMFF014N02+ AGTACNTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMSF039L15+ AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMSF043B14+ GGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
rJMFF029H18+ AGTACNTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
____________________________________________________________
consensus AGTACCTCTTCCAAGAGGGAGTGTGCTATGCGAAGAAAGATTACAACTTGGCGAAGCATC
. : . : . : . : . : . :
rJMSF025A04+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMSF039L15- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMSF038C06- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMSF025A04- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMSF038B06- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAANG
JMFF008H16- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMFF029H18- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMFF014N02- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMSF043B14- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
JMFF022N05- CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMSF038P23+ CCTTGATCGATGTGCCCAACCTTCAGGTTANTAAGCTTANGCAGAGCTTCAAGTCGAAGG
rJMSF038C06+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMFF022N05+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMFF022H11+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMFF014N02+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMSF039L15+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMSF043B14+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
rJMFF029H18+ CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
____________________________________________________________
consensus CCTTGATCGATGTGCCCAACCTTCAGGTTATTAAGCTTATGCAGAGCTTCAAGTCGAAGG
. : . : . : . : . : . :
rJMSF025A04+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMSF039L15- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMSF038C06- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMSF025A04- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMSF038B06- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMFF008H16- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMFF029H18- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMFF014N02- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
JMSF043B14- AGTACGTGAGGGAGACTTTTGCTTGGATGCATTATTACTGGTACCTTACGAACGATGGGA
JMFF022N05- AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMSF038P23+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTNCGANGGATGGGA
rJMSF038C06+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMFF022N05+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMFF022H11+ AGTACGTGAGGGAGACTTTCGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMFF014N02+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMSF039L15+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
rJMSF043B14+ AGTACGTGAGGGAGACTTTTGCTTGGATGCATTATTACTGGTACCTTACGAACGATGGGA
rJMFF029H18+ AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
____________________________________________________________
consensus AGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTACCTTACGAACGATGGGA
. : . : . : . : . : . :
rJMSF025A04+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMSF039L15- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMSF038C06- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMSF025A04- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMSF038B06- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMFF008H16- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMFF029H18- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMFF014N02- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMSF043B14- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
JMFF022N05- TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMSF038P23+ TTGAGT
rJMSF038C06+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMFF022N05+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMFF022H11+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMFF014N02+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMSF039L15+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMSF043B14+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
rJMFF008H16+ CTCTCAAGA
rJMFF029H18+ TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
____________________________________________________________
consensus TTGAGTTCCTGAGGACTTACCTCAATCTCCCCTCTGAAATTGTCCCTGCTACTCTCAAGA
. : . : . : . : . : . :
rJMSF025A04+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMSF039L15- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMSF038C06- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMSF025A04- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMSF038B06- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMFF008H16- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMFF029H18- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMFF014N02- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMSF043B14- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
JMFF022N05- AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMSF038C06+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMFF022N05+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMFF022H11+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMFF014N02+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMSF039L15+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMSF043B14+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMFF008H16+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
rJMFF029H18+ AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
____________________________________________________________
consensus AATCTGCCAAGCCACTCGGCAGGCCCATGGGTGGCCCTCCTGGTGATCGCCCACGTGGAC
. : . : . : . : . : . :
rJMSF025A04+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMSF039L15- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMSF038C06- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMSF025A04- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMSF038B06- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMFF008H16- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGATGGGGTATCGCAGT-G
JMFF029H18- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMFF014N02- CTCCGAGATTTGGCGATGGNAGAGAGGAGGTTTGGTGACAGGGAG-GGGTATCGCAGTGG
JMSF043B14- CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
JMFF022N05- CTCCGAGATTTGGCGATGG-AGAGAGGANGTTTGGTGACAGGG
rJMSF038C06+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMFF022N05+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMFF022H11+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMFF014N02+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMSF039L15+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMSF043B14+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMFF008H16+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
rJMFF029H18+ CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
____________________________________________________________
consensus CTCCGAGATTTGGCGATGG-AGAGAGGAGGTTTGGTGACAGGGAT-GGGTATCGCAGT-G
. : . : . : . : . : . :
rJMSF025A04+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMSF039L15- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMSF038C06- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMSF025A04- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMSF038B06- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMFF008H16- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMFF029H18- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMFF014N02- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
JMSF043B14- GCCCTAGAGGTCCTCCTGGTGAGTTTGGAG
rJMSF038C06+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMFF022N05+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMFF022H11+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMFF014N02+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMSF039L15+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMSF043B14+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMFF008H16+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
rJMFF029H18+ GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
____________________________________________________________
consensus GCCCTAGAGGTCCTCCTGGTGAGTTTGGAGGAGAGAAGGGTGGAGCTCCGGCTGATTACC
. : . : . : . : . : . :
rJMSF025A04+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
JMSF039L15- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
JMSF038C06- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
JMSF025A04- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
JMSF038B06- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGANGATTTG
JMFF008H16- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGA
JMFF029H18- AGCCTGCTTTCAGGGGGTCTGGTGGAA
JMFF014N02- AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGACTTGGACGTGGTGCC
rJMSF038C06+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMFF022N05+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMFF022H11+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMFF014N02+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGACTTGGACGTGGTGCCGGAGGATTTG
rJMSF039L15+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMSF043B14+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMFF008H16+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
rJMFF029H18+ AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
____________________________________________________________
consensus AGCCTGCTTTCAGGGGGTCTGGTGGAAGGCCTGGATTTGGACGTGGTGCCGGAGGATTTG
. : . : . : . : . : . :
rJMSF025A04+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
JMSF039L15- GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
JMSF038C06- GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
JMSF025A04- GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTANATAATATGCTCATTTCCTTAGG
JMSF038B06- GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCAT
rJMSF038C06+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMFF022N05+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMFF022H11+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMFF014N02+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMSF039L15+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMSF043B14+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMFF008H16+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
rJMFF029H18+ GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
____________________________________________________________
consensus GAGGTGGTGCTCCCCCAAGCTCTAGCTTCTCCTCCTAGATAATATGCTCATTTCCTTAGG
. : . : . : . : . : . :
rJMSF025A04+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
JMSF039L15- TGCATAGCCNTTACAGCTTAAAACATCAGAGGCAATGTGAGCTATGGTTTGAGCGT
JMSF038C06- TGCATAGCCNTTACAGCTTA
JMSF025A04- TGCATANCCNTTACAGCTT
rJMSF038C06+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMFF022N05+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMFF022H11+ TGCATAGCCATTACAGCTT-TAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMFF014N02+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMSF039L15+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMSF043B14+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMFF008H16+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
rJMFF029H18+ TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
____________________________________________________________
consensus TGCATAGCCATTACAGCTTAGAACATCAGAGGCAATGTGAGCTATTGTTTGAGCGTTTAT
. : . : . : . : . : . :
rJMSF025A04+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMSF038C06+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMFF022N05+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMFF022H11+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMFF014N02+ TCCCGTGTTCAAGTACACTATTTGGATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMSF039L15+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMSF043B14+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMFF008H16+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
rJMFF029H18+ TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
____________________________________________________________
consensus TCCCGTGTTCAAGTACACTATTTGAATGTGATGTTTTCACAATTTTGTATGCTTGTCAAA
. : . : . : . : . : . :
rJMSF025A04+ ACTA
rJMSF038C06+ ACTATACAT
rJMFF022N05+ ACTATACATTTTGGATATCATCC
rJMFF022H11+ ACTATACATTTTGGATATCATCC
rJMFF014N02+ ACTATACATTTTGGATATCAT
rJMSF039L15+ ACTATACATTTTGGATATCATCCTTTACTTTATTCTGT
rJMSF043B14+ A
rJMFF008H16+ ACTATACATTTTGGATATCATCC
rJMFF029H18+ ACTATACATTTTGGATATCATCCTTTACTTTATTCTGTTTTGCTACCATGTTACAAGGAT
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consensus ACTATACATTTTGGATATCATCCTTTACTTTATTCTGTTTTGCTACCATGTTACAAGGAT