| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMSF003D24 | Sequence | 417 | 004997 (13) | ref|XP_007028858.1| | 8e-18 | Transducin/WD40 repeat-like superfamily protein isoform 2, partial [Theobroma c | 698 | 004997 (13) | ref|XP_009596754.1| | 3e-50 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| |
| JMSF008K02 | Sequence | 156 | 004997 (13) | ref|XP_007028858.1| | 1e-20 | Transducin/WD40 repeat-like superfamily protein isoform 2, partial [Theobroma c | |||||
| JMSF008L02 | Sequence | 420 | 004997 (13) | ref|XP_007028858.1| | 3e-19 | Transducin/WD40 repeat-like superfamily protein isoform 2, partial [Theobroma c | 741 | 004997 (13) | ref|XP_009596754.1| | 1e-107 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| |
| JMSF010M09 | Sequence | 294 | 004997 (13) | 756 | 004997 (13) | ref|XP_009596754.1| | 2e-100 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| | |||
| JMSF015B23 | Sequence | 252 | 004997 (13) | 766 | 004997 (13) | ref|XP_009596754.1| | 7e-50 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| | |||
| JMSF017D14 | Sequence | 418 | 004997 (13) | tpg|DAA42242.1| | 1e-30 | TPA: hypothetical protein ZEAMMB73_993099 [Zea mays] | 802 | 004997 (13) | ref|XP_009596754.1| | 1e-147 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| |
| JMSF045D15 | Sequence | 779 | 004997 (13) | ref|XP_004234794.1| | 5e-122 | PREDICTED: protein LST8 homolog [Solanum lycopersicum] | 781 | 004997 (13) | ref|XP_009596754.1| | 1e-147 | PREDICTED: protein LST8 homolog [Nicotiana tomentosiformis] ref|XP_009767070.1| |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig004997============================================1536 1 -------------------------->JMSF003D24 <------------------------------------rJMSF003D24 8 --------------->JMSF015B23 <-----------------------------------rJMSF015B23 8 ------------------>JMSF010M09 <------------------------------------------------rJMSF010M09 254 -------------------------->JMSF008L02 <----------------------------------rJMSF008L02 680 ---------->JMSF017D14 <------------------------------------rJMSF017D14 680 ---------------------------------->JMSF045D15 <------------------------------------rJMSF045D15
The following clones don't have the opposite end in this pair.
------->JMSF008K02-